New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1120467 =131 (0.680)2 (0.010) 2/182 31.3 0.01 coding (179/357 nt) RCAP_rcc01040 hypothetical protein
?NC_014034 = 3590755 201 (0.950)coding (150/339 nt) glnB2 nitrogen regulatory protein P‑II
Rejected: Position hash score below cutoff.

GAATTGGCGAAGTACAGCACCCCCGCCGCCAGCGCGACGAGCCCGAGCACCGGCGCATTGCGCGCCAGATGCGCGGCAAGCGTCGCCACCGCCCCCGCCCCGGCGCCGA....................................................................................................  <  NC_014034/1120575‑1120467
....................................................................................................CGGCGCCGAATATGCGGTGAATTTCGTGCCGAAGGTGAAGCTTGAAATCGTCGTGGCCGACAATCTGGCCGACGAGGTGGTCGAGACGATCCTGAAAGCGGCCAAGACC  <  NC_014034/3590755‑3590656
                                                                                                                                                                                                                 
                                         CCCGAGCACCGGCGCATTGCGCGCCAGATGCGCGGCAAGCGTCGCCACCGCCCCCGCCCCGGCGCCGAATATGCGGTGAATTTCGTGCCGAAGGTGAAGCT                                                                     >  2:1241962/1‑101 (MQ=255)
                                           CGAGCACCGGCGCATTGCGCGCCAGATGCGCGGCAAGCGTCGCCACCGCCCCCGCCCCGGCGCCGAATATGCGGTGAATTTCGTGCCGAAGGTGAAGCTTG                                                                   <  1:1242058/101‑1 (MQ=255)
                                                                                                                                                                                                                 
GAATTGGCGAAGTACAGCACCCCCGCCGCCAGCGCGACGAGCCCGAGCACCGGCGCATTGCGCGCCAGATGCGCGGCAAGCGTCGCCACCGCCCCCGCCCCGGCGCCGA....................................................................................................  <  NC_014034/1120575‑1120467
....................................................................................................CGGCGCCGAATATGCGGTGAATTTCGTGCCGAAGGTGAAGCTTGAAATCGTCGTGGCCGACAATCTGGCCGACGAGGTGGTCGAGACGATCCTGAAAGCGGCCAAGACC  <  NC_014034/3590755‑3590656

Base quality scores:  ATCG  < 3 ≤  ATCG  < 25 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG