New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 119490163 (0.820)2 (0.010) 2/188 31.8 0.01 coding (345/927 nt) RCAP_rcc00112 AraC family transcriptional regulator
?NC_014034 = 3697569 208 (0.980)coding (434/1158 nt) hemN3 oxygen‑independent coproporphyrinogen‑III oxidase
Rejected: Position hash score below cutoff.

TCATCGGGCCGCATCGGTTGCGGCTGGAACGGCGGGCCGAAGAGCCGGTGCGGATGGCCTTTTACGCGCTGGGCGCGGCGGCGCCGTTCCTGCGCCGGGCGCGG...................................................................................................  >  NC_014034/119387‑119490
..................................................................................................GCGCGGCCGAGGGGCGGGCGGCGTTCGACATCGCCCGGGCGCATTTTCCCCGTGTCAGCTTCGATCTGATCTATGCCCGGCAGGGGCAAGGCCTCGACGATTGGG  <  NC_014034/3697569‑3697471
                                                                                                                                                                                                           
                                                      TGGCCTTTTACGCGCTGGGCGCGGCGGCGCCGTTCCTGCGCCGGGCGCGGCCGAGGGGCGGGCGGCGTTCGACATCGCCCGGGCGCATTTTCCCCGTGTCA                                                  >  1:3523004/1‑101 (MQ=255)
                                                                            GGCGGCGCCGTTCCTGCGCCGGGCGCGGCCGAGGGGCGGGCGGCGTTCGACATCGCCCGGGCGCATTTTCCCCGTGTCAGCTTCGATCTGATCTATGCCCG                            <  2:3522751/101‑1 (MQ=255)
                                                                                                                                                                                                           
TCATCGGGCCGCATCGGTTGCGGCTGGAACGGCGGGCCGAAGAGCCGGTGCGGATGGCCTTTTACGCGCTGGGCGCGGCGGCGCCGTTCCTGCGCCGGGCGCGG...................................................................................................  >  NC_014034/119387‑119490
..................................................................................................GCGCGGCCGAGGGGCGGGCGGCGTTCGACATCGCCCGGGCGCATTTTCCCCGTGTCAGCTTCGATCTGATCTATGCCCGGCAGGGGCAAGGCCTCGACGATTGGG  <  NC_014034/3697569‑3697471

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG