New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1320482168 (0.870)2 (0.010) 2/182 31.3 0.01 coding (894/954 nt) potI1 polyamine ABC transporter permease PotI
?NC_014034 = 2787197 189 (0.890)coding (97/456 nt) RCAP_rcc02597 hypothetical protein
Rejected: Position hash score below cutoff.

TGACCAGCAGACGATCCCGCGGCAGATGTGGAACGGCATCCGCGAACAGATCAGCCCGGCGATCCTGGCGGTGGCGACGCTTCTGGTGATCATCTCGGTGGCGCTTTTG....................................................................................................  >  NC_014034/1320374‑1320482
....................................................................................................GCGCTTTTGCTGCTGGTCGCGGGCCTGTTCTGGGGGGTCTGGAAAAGCCAGTTCGCCGCGCCCTCGGGACATCTGTTCAACACCCCCAACCAGGATGTCGAGGCGGGCT  <  NC_014034/2787197‑2787098
                                                                                                                                                                                                                 
                                                                         atctCGCTTCTGGTGATCATCTCGGTGGCGCTTTTGCTGCTGGTCGCGGGCCTGTTCTGGGGGGTCTGGAAAAGCCAGTTCGCCGCGCCCTCGGGACATCT                                     <  1:3184635/97‑1 (MQ=255)
                                                                             CGCTTCTGGTGATCATCTCGGTGGCGCTTTTGCTGCTGGTCGCGGGCCTGTTCTGGGGGGTCTGGAAAAGCCAGTTCGCCGCGCCCTCGGGACATCTagat                                 >  2:3184396/1‑97 (MQ=255)
                                                                                                                                                                                                                 
TGACCAGCAGACGATCCCGCGGCAGATGTGGAACGGCATCCGCGAACAGATCAGCCCGGCGATCCTGGCGGTGGCGACGCTTCTGGTGATCATCTCGGTGGCGCTTTTG....................................................................................................  >  NC_014034/1320374‑1320482
....................................................................................................GCGCTTTTGCTGCTGGTCGCGGGCCTGTTCTGGGGGGTCTGGAAAAGCCAGTTCGCCGCGCCCTCGGGACATCTGTTCAACACCCCCAACCAGGATGTCGAGGCGGGCT  <  NC_014034/2787197‑2787098

Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG