New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1796825	179 (0.930)	2 (0.010)	2/182	31.3	0.01	coding (1025/1170 nt)	RCAP_rcc01659	hypothetical protein
	?	NC_014034	= 1806762	149 (0.700)					coding (789/1413 nt)	RCAP_rcc01667	methyl‑accepting chemotaxis sensory transducer
Rejected: Position hash score below cutoff.

TCGACATGGTGGCGCATCTGCGCGCGGAAATGGCCGGTCTGTGCGCGGGCGGGCGTCCTTCGGTGATCCTGGCCTTCGACTGTTTCTTTCGCCGTCTGGAGGCCGAGGG...................................................................................................  >  NC_014034/1796717‑1796825 ....................................................................................................GGCCGAGGGCATGCAGCAAACCTCGACCGAGGTGCATGAAGCGACCCAAAAGACCCGGACCCTGATCATCGCGGGCGAGACCATCGTGCAGGAGGCGGTCGAACTGGG  <  NC_014034/1806762‑1806664                                                                                                                                                                                                                                                                        tTCCTTCGGTGATCCTGGCCTTCGACTGTTTCTTTCGCCGTCTGGAGGCCGAGGGCATGCAGCAAACCTCGACCGAGGTGCATGAAGCGACCCAAAAGACC                                                       <  2:3395854/100‑1 (MQ=255)                                                        TCCTTCGGTGATCCTGGCCTTCGACTGTTTCTTTCGCCGTCTGGAGGCCGAGGGCATGCAGCAAACCTCGACCGAGGTGCATGAAGCGACCCAAAAGACCa                                                      >  1:3396099/1‑100 (MQ=255)                                                                                                                                                                                                                  TCGACATGGTGGCGCATCTGCGCGCGGAAATGGCCGGTCTGTGCGCGGGCGGGCGTCCTTCGGTGATCCTGGCCTTCGACTGTTTCTTTCGCCGTCTGGAGGCCGAGGG...................................................................................................  >  NC_014034/1796717‑1796825 ....................................................................................................GGCCGAGGGCATGCAGCAAACCTCGACCGAGGTGCATGAAGCGACCCAAAAGACCCGGACCCTGATCATCGCGGGCGAGACCATCGTGCAGGAGGCGGTCGAACTGGG  <  NC_014034/1806762‑1806664 Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 36 ≤  ATCG  < 41 ≤  ATCG