New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2149088 =178 (0.920)2 (0.010) 2/182 31.3 0.01 coding (134/441 nt) RCAP_rcc01993 hypothetical protein
?NC_014034 = 3572583 198 (0.930)coding (91/399 nt) RCAP_rcc03376 hypothetical protein
Rejected: Position hash score below cutoff.

GCGATCTGCTGTTCGTAGCCCGCGGCGGTATAGCCGCAGGGCACCGAGATCTCGCCCGCGTCGCGCATGCCGCGGATGTATTCCTTGAAGCCGTTCGGGCTGTCGAGCG....................................................................................................  <  NC_014034/2149196‑2149088
....................................................................................................TGTCGAGCGCCTCGCACAGGGTGAGGAACGCGGTCTTTTCCGCCTTCTCGACCCGGATCACCAATTGGCTTTCCTTCTTCTTTTCCTTGGTCTTGCCCATCGCGGCCTC  <  NC_014034/3572583‑3572484
                                                                                                                                                                                                                 
                              TAGCCGCAGGGCACCGAGATCTCGCCCGCGTCGCGCATGCCGCGGATGTATTCCTTGAAGCCGTTCGGGCTGTCGAGCGCCTCGCACAGGGTGAGGAACGC                                                                                >  2:3395489/1‑101 (MQ=255)
                                                ATCTCGCCCGCGTCGCGCATGCCGCGGATGTATTCCTTGAAGCCGTTCGGGCTGTCGAGCGCCTCGCACAGGGTGAGGAACGCGGTCTTTTCCGCCTTCTC                                                              <  1:3395734/101‑1 (MQ=255)
                                                                                                                                                                                                                 
GCGATCTGCTGTTCGTAGCCCGCGGCGGTATAGCCGCAGGGCACCGAGATCTCGCCCGCGTCGCGCATGCCGCGGATGTATTCCTTGAAGCCGTTCGGGCTGTCGAGCG....................................................................................................  <  NC_014034/2149196‑2149088
....................................................................................................TGTCGAGCGCCTCGCACAGGGTGAGGAACGCGGTCTTTTCCGCCTTCTCGACCCGGATCACCAATTGGCTTTCCTTCTTCTTTTCCTTGGTCTTGCCCATCGCGGCCTC  <  NC_014034/3572583‑3572484

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG