New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 232853 =163 (0.820)2 (0.010) 2/188 31.8 0.01 coding (390/816 nt) RCAP_rcc00196 hypothetical protein
?NC_014034 1472190 = 226 (1.070)coding (556/1659 nt) nadE NAD(+) synthase (glutamine‑hydrolyzing)
Rejected: Position hash score below cutoff.

GGCCGAGGATCCGGTGGGGCAGATCGTGCAATGCGCCCGGGCGCTGCGGCCGGACGGGCTGTTCATCGCCGTGCTGTTCGGCGGCCAGACCCTGTCGGAGCTGCGC....................................................................................................  <  NC_014034/232958‑232853
....................................................................................................CTGCGCCGCCAGGTGACCGGGGCGCGGGTGGCGGAAACCGGGCTGCCGCTTTTGTATCTGAACATGGTCGGCGGGCAGGATGACCAGCTGTTTGACGGCGCCAGTT  >  NC_014034/1472190‑1472289
                                                                                                                                                                                                              
                          TGCAATGCGCCCGGGCGCTGCGGCCGGACGGGCTGTTCATCGCCGTGCTGTTCGGCGGCCAGACCCTGTCGGAGCTGCGCCGCCAGGTGACCGGGGCGCGG                                                                                 >  2:723060/1‑101 (MQ=255)
                                                                  CGCCGTGCTGTTCGGCGGCCAGACCCTGTCGGAGCTGCGCCGCCAGGTGACCGGGGCGCGGGTGGCGGAAACCGGGCTGCCGCTTTTGTATCTGAACATGG                                         <  1:723136/101‑1 (MQ=255)
                                                                                                                                                                                                              
GGCCGAGGATCCGGTGGGGCAGATCGTGCAATGCGCCCGGGCGCTGCGGCCGGACGGGCTGTTCATCGCCGTGCTGTTCGGCGGCCAGACCCTGTCGGAGCTGCGC....................................................................................................  <  NC_014034/232958‑232853
....................................................................................................CTGCGCCGCCAGGTGACCGGGGCGCGGGTGGCGGAAACCGGGCTGCCGCTTTTGTATCTGAACATGGTCGGCGGGCAGGATGACCAGCTGTTTGACGGCGCCAGTT  >  NC_014034/1472190‑1472289

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG