New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 258156212 (1.050)2 (0.010) 2/190 32.0 0.01 coding (892/921 nt) RCAP_rcc00221 hypothetical protein
?NC_014034 1911858 = 176 (0.830)coding (592/978 nt) glk glucokinase
Rejected: Position hash score below cutoff.

CGCTGTCCTGCGCCCGGTTGGCACCCGCACCGAGCAGGTGCCGCTGTCGCTGGCCATGCCCGATTGCGGCGATGGCGAGGGCGCGGTGATGATGCCGCTGCCCG....................................................................................................  >  NC_014034/258053‑258156
...................................................................................................GCCCGAGAGCACGTCCTCGACCGCAGCAAAACCATGCGCCGCCTCGACAAAGCGCATCAGGCGGATGTCTTCGTCCGTCACCGTGGGCAAGGTGATGTGGCCGCA  >  NC_014034/1911858‑1911957
                                                                                                                                                                                                            
                                                   GGCCATGCCCGATTGCGGCGATGGCGAGGGCGCGGTGATGATGCCGCTGCCCGAGAGCACGTCCTCGACCGCAGCAAAACCATGCGCCGCCTCGACAAAGC                                                      >  2:3016003/1‑101 (MQ=255)
                                                                    GCGATGGCGAGGGCGCGGTGATGATGCCGCTGCCCGAGAGCACGTCCTCGACCGCAGCAAAACCATGCGCCGCCTCGACAAAGCGCATCAGGCGGATGTCT                                     <  1:3016228/101‑1 (MQ=255)
                                                                                                                                                                                                            
CGCTGTCCTGCGCCCGGTTGGCACCCGCACCGAGCAGGTGCCGCTGTCGCTGGCCATGCCCGATTGCGGCGATGGCGAGGGCGCGGTGATGATGCCGCTGCCCG....................................................................................................  >  NC_014034/258053‑258156
...................................................................................................GCCCGAGAGCACGTCCTCGACCGCAGCAAAACCATGCGCCGCCTCGACAAAGCGCATCAGGCGGATGTCTTCGTCCGTCACCGTGGGCAAGGTGATGTGGCCGCA  >  NC_014034/1911858‑1911957

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG