New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 261964 =178 (0.880)3 (0.010) 3/190 30.8 0.02 coding (224/1914 nt) dnaK chaperone DnaK
?NC_014034 637229 = 169 (0.800)coding (1627/2745 nt) RCAP_rcc00596 hypothetical protein
Rejected: Position hash score below cutoff.

CGCCTACACCGACAACGAGCGTCTGGTCGGCCAGCCCGCCAAGCGGCAAGCCGTGACCAACCCCACGAACACCGTCTTTGCGGTCAAGCGCCTGATCGGCCGCCG....................................................................................................  <  NC_014034/262068‑261964
....................................................................................................CGCCGACCGAGGCCGAGGCGGGGGTGAGGGGCGAGGATCTGGCCGAGGGCCCGCCCGGCCCCGATCTGCCGCCCGGGCTTTACGCGACCGAGGATCAGGTTCTGG  >  NC_014034/637229‑637328
                                                                                                                                                                                                             
                                                   ctTGACCAACCCCACGAACCCCGTCTTTGCGGTCAAGCGCCTGATCGGCCGCCGACCGAGGCCGAGGCGGGGGTGAGGGGCGAGGATCTGGCCGAGGGCCC                                                       <  2:672235/99‑1 (MQ=255)
                                                     TGACCAACCCCACGAACACCGTCTTTGCGGTCAAGCGCCTGATCGGCCGCCGACCGAGGCCGAGGCGGGGGTGAGGGGCGAGGATCTGACCGAGTGCCCag                                                     >  1:672312/1‑99 (MQ=255)
                                                                                               tgtGCCGCCGCCCGAGGCCGAGGCGGGGGTGAGGGGCGAGGATCTGGCCGAGGGCCCGCCCGGCCCCGATCTGCCGCCCGGGCTTTACGCGACCGAGGATC           <  2:595741/98‑1 (MQ=255)
                                                                                                                                                                                                             
CGCCTACACCGACAACGAGCGTCTGGTCGGCCAGCCCGCCAAGCGGCAAGCCGTGACCAACCCCACGAACACCGTCTTTGCGGTCAAGCGCCTGATCGGCCGCCG....................................................................................................  <  NC_014034/262068‑261964
....................................................................................................CGCCGACCGAGGCCGAGGCGGGGGTGAGGGGCGAGGATCTGGCCGAGGGCCCGCCCGGCCCCGATCTGCCGCCCGGGCTTTACGCGACCGAGGATCAGGTTCTGG  >  NC_014034/637229‑637328

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 15 ≤  ATCG  < 27 ≤  ATCG  < 39 ≤  ATCG