New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2916418	209 (1.080)	2 (0.010)	2/182	31.3	0.01	coding (416/594 nt)	RCAP_rcc02724	ECF family RNA polymerase sigma factor
	?	NC_014034	3344788 =	190 (0.900)					coding (363/822 nt)	RCAP_rcc03147	MerR family transcriptional regulator
Rejected: Position hash score below cutoff.

CGCTGGGTTGCATGCTGGCAGAGGCGGACAGTCTGGCCGCCTGGCATGGTCAGGACCGCTCCGCCGTGGAAGATGCCGAGACCCGTCACGATCTCGCCCGGGCGCTGGG....................................................................................................  >  NC_014034/2916310‑2916418 ....................................................................................................GGCGCTGGGGGTCTCTGCCTCGGCGCTCTCGACGCTGGAACGCACCGGGGCGGGGGTCAGCTTCAAGACGCTGGCGGATCTGGCGCAATATTACGGCACCACCGTGTCG  >  NC_014034/3344788‑3344887                                                                                                                                                                                                                                                   CTGGCCGCCTGGCATGGTCAGGACCGCTCCGCCGTGGAAGATGCCGAGACCCGTCACGATCTCGCCCGGGCGCTGGGGGTCTCTGCCTCGGCGCTCTCGAC                                                                              >  1:858557/1‑101 (MQ=255)                                                                  GTGGAAGATGCCGAGACCCGTCACGATCTCGCCCGGGCGCTGGGGGTCTCTGCCTCGGCGCTCTCGACGCTGGAACGCACCGGGGCGGGGGTCAGCTTCAA                                             <  2:858476/101‑1 (MQ=255)                                                                                                                                                                                                                   CGCTGGGTTGCATGCTGGCAGAGGCGGACAGTCTGGCCGCCTGGCATGGTCAGGACCGCTCCGCCGTGGAAGATGCCGAGACCCGTCACGATCTCGCCCGGGCGCTGGG....................................................................................................  >  NC_014034/2916310‑2916418 ....................................................................................................GGCGCTGGGGGTCTCTGCCTCGGCGCTCTCGACGCTGGAACGCACCGGGGCGGGGGTCAGCTTCAAGACGCTGGCGGATCTGGCGCAATATTACGGCACCACCGTGTCG  >  NC_014034/3344788‑3344887 Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 36 ≤  ATCG  < 41 ≤  ATCG