New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3075838 =195 (0.940)2 (0.010) 2/196 32.5 0.01 coding (247/1053 nt) RCAP_rcc02878 monosacharide ABC transporter permease
?NC_014034 = 3691927 164 (0.770)coding (304/396 nt) RCAP_rcc03484 hypothetical protein
Rejected: Position hash score below cutoff.

TCTGCGCGGTCGGGCTGACGCTGGTGATCATGACGGGCGGGATGGATATTTCCGGCGTCTCGATCATGGGGCTGTGCTCGATCGTGCTTGGCCTTGGCTTCG....................................................................................................  <  NC_014034/3075939‑3075838
....................................................................................................CGCCGCCGGGGCTGCCGTCGGCGTGGCCGCGGCCTGCGACATCGCCATCAGCAGTTCCAGCCGCTGCGCGCTCTGCTCGGCGCGTTCGGTCAGGCTGCGCAA  <  NC_014034/3691927‑3691828
                                                                                                                                                                                                          
                                                          tctGATCATGGGGCTGTGCTCGATCGTGCTTGGCCTTGGCTTCGCCGCCGGGGCTGCCGTCGGCGTGGCCGCGGCCTGCGACATCGCCATCAGCAGTTCCA                                             <  2:1417437/98‑1 (MQ=255)
                                                             GATCATGGGGCTGTGCTCGATCGTGCTTGGCCTTGGCTTCGCCGCCGGGGCTGCCGTCGGCGTGGCCGCGGCCTGCGACATCGCCATCAGCAGTTCCAaga                                          >  1:1417534/1‑98 (MQ=255)
                                                                                                                                                                                                          
TCTGCGCGGTCGGGCTGACGCTGGTGATCATGACGGGCGGGATGGATATTTCCGGCGTCTCGATCATGGGGCTGTGCTCGATCGTGCTTGGCCTTGGCTTCG....................................................................................................  <  NC_014034/3075939‑3075838
....................................................................................................CGCCGCCGGGGCTGCCGTCGGCGTGGCCGCGGCCTGCGACATCGCCATCAGCAGTTCCAGCCGCTGCGCGCTCTGCTCGGCGCGTTCGGTCAGGCTGCGCAA  <  NC_014034/3691927‑3691828

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG