New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 315050 =204 (1.020)2 (0.010) 2/188 31.8 0.01 coding (484/744 nt) RCAP_rcc00277 hypothetical protein
?NC_014034 = 3452314 173 (0.820)coding (607/1662 nt) cydC cysteine ABC transporter ATP‑binding protein/permease CydC
Rejected: Position hash score below cutoff.

AGGTGACGGCCCGGTCGGAAATCACGAACCAGGCGGTCAGCCCGTCGGCCGAAACCCCCACGCCGTTGCGGATATAGGTCGAGGTGCTGTCGGGCAGGAACCGCGG...................................................................................................  <  NC_014034/315155‑315050
....................................................................................................CCGCGGCGCGCAGCCCCTGCAGCCCGGCCTCGGCGGCGGCGGCCGGGCGCAGGGCGATGCGGGCGGTGACCGCCAGAACCAGCGTTCCCCCCAGCGCATAGATCA  <  NC_014034/3452314‑3452216
                                                                                                                                                                                                             
                                                                GTTGCGGATATAGGTCGAGGTGCTGTCGGGCAGGAACCGCGGCGCGCAGCCCCTGCAGCCCGGCCTCGGCGGCGGCGGCCGGGCGCAGGGCGATGCGGGCG                                          >  2:1438608/1‑101 (MQ=255)
                                                                     GGATATAGGTCGAGGTGCTGTCGGGCAGGAACCGCGGCGCGCAGCCCCTGCAGCCCGGCCTCGGCGGCGGCGGCCGGGCGCAGGGCGATGCGGGCGGTGAC                                     <  1:1438710/101‑1 (MQ=255)
                                                                                                                                                                                                             
AGGTGACGGCCCGGTCGGAAATCACGAACCAGGCGGTCAGCCCGTCGGCCGAAACCCCCACGCCGTTGCGGATATAGGTCGAGGTGCTGTCGGGCAGGAACCGCGG...................................................................................................  <  NC_014034/315155‑315050
....................................................................................................CCGCGGCGCGCAGCCCCTGCAGCCCGGCCTCGGCGGCGGCGGCCGGGCGCAGGGCGATGCGGGCGGTGACCGCCAGAACCAGCGTTCCCCCCAGCGCATAGATCA  <  NC_014034/3452314‑3452216

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG