New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3184152 =197 (1.010)2 (0.010) 2/184 31.5 0.01 coding (546/1836 nt) ilvD dihydroxy‑acid dehydratase
?NC_014034 = 3357447 194 (0.920)coding (1409/2193 nt) RCAP_rcc03159 hemolysin‑type calcium‑binding repeat family protein
Rejected: Position hash score below cutoff.

TTGCCGGGCAGGGCCAGACCCAGCGCCTCGGCCAGACAGTTCATCGAATTCGCGGTGAACATGCCGGAACAAGATCCGCAGGTCGGGCAGGCGGCTTTCTCGATCGCC....................................................................................................  <  NC_014034/3184259‑3184152
....................................................................................................CGATCGCCACCACGCCGCCCTCGACGGTGTCGAGCCGGAATTCCATGTCGGCGGTGAAAGCCTCGTCGCGGATCAGCACCGTCTCGAAGCTTCCCGCCGCCGCGCCGG  <  NC_014034/3357447‑3357348
                                                                                                                                                                                                                
                                       TTCATCGAATTCGCGGTGAACATGCCGGAACAAGATCCGCAGGTCGGGCAGGCGGCTTTCTCGATCGCCACCACGCCGCCCTCGACGGTGTCGAGCCGGAA                                                                      >  1:3736024/1‑101 (MQ=255)
                                                       TGAACATGCCGGAACAAGATCCGCAGGTCGGGCAGGCGGCTTTCTCGATCGCCACCACGCCGCCCTCGACGGTGTCGAGCCGGAATTCCATGTCGGCGGTG                                                      <  2:3735770/101‑1 (MQ=255)
                                                                                                                                                                                                                
TTGCCGGGCAGGGCCAGACCCAGCGCCTCGGCCAGACAGTTCATCGAATTCGCGGTGAACATGCCGGAACAAGATCCGCAGGTCGGGCAGGCGGCTTTCTCGATCGCC....................................................................................................  <  NC_014034/3184259‑3184152
....................................................................................................CGATCGCCACCACGCCGCCCTCGACGGTGTCGAGCCGGAATTCCATGTCGGCGGTGAAAGCCTCGTCGCGGATCAGCACCGTCTCGAAGCTTCCCGCCGCCGCGCCGG  <  NC_014034/3357447‑3357348

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG