New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 703156162 (0.840)2 (0.010) 2/182 31.3 0.01 coding (2066/2811 nt) RCAP_rcc00643 diguanylate cyclase/phosphodiesterase
?NC_014034 = 1482991 199 (0.940)coding (226/1365 nt) glnA2 glutamine synthetase
Rejected: Position hash score below cutoff.

GATCGCGGGCATCAGCCCGGCCTTGGCGGCCACCGGCAGAAACGCGCCCGGCATCACCAGCCCATGCCCGGGCCGGTTCCAGCGCACCAGCGCCTCGCAGCCGCGCG....................................................................................................  >  NC_014034/703050‑703156
..................................................................................................AGCCGCGCGACCATGAAGACGCCTTGTAGCCCGGCACGGTGATCATCTCCATGTCGGTCGCCAGCAGATAGTTGCAGCAATGCGTCTCCTCATGCGCGCTTTCCAGAAA  <  NC_014034/1482991‑1482892
                                                                                                                                                                                                               
                                                                            TTCCAGCGCACCAGCGCCTCGCAGCCGCGCGACCATGAAGACGCCTTGTAGCCCGGCACGGTGATCATCTCCATGTCGGTCGCCAGCAGATAGTTGCAGCA                                <  1:3964660/101‑1 (MQ=255)
                                                                             TCCAGCGCACCAGCGCCTCGCAGCCGCGCGACCATGAAGACGCCTTGTAGCCCGGCACGGTGATCATCTCCATGTCGGTCGCCAGCAGATAGTTGCAGCAA                               >  2:3964400/1‑101 (MQ=255)
                                                                                                                                                                                                               
GATCGCGGGCATCAGCCCGGCCTTGGCGGCCACCGGCAGAAACGCGCCCGGCATCACCAGCCCATGCCCGGGCCGGTTCCAGCGCACCAGCGCCTCGCAGCCGCGCG....................................................................................................  >  NC_014034/703050‑703156
..................................................................................................AGCCGCGCGACCATGAAGACGCCTTGTAGCCCGGCACGGTGATCATCTCCATGTCGGTCGCCAGCAGATAGTTGCAGCAATGCGTCTCCTCATGCGCGCTTTCCAGAAA  <  NC_014034/1482991‑1482892

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 36 ≤  ATCG  < 41 ≤  ATCG