New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	772480 =	103 (0.650)	2 (0.020)	2/124	25.1	0.02	intergenic (+63/+158)	RCAP_rcc00703/oppC1	deoxyribodipyrimidine photolyase‑related protein/oligopeptide ABC transporter permease OppC
	?	NC_014034	1667700 =	106 (0.500)					intergenic (+145/+75)	RCAP_rcc01541/ilvH	hypothetical protein/acetolactate synthase small subunit
Rejected: Position hash score below cutoff.

TTTCCCCGCCCGCAGCGCAACGCCTCGACACGACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCT....................................................................................................  <  NC_014034/772604‑772480 ....................................................................................................CGGGGCGGGCGCTGGCCGAGTGCCTGAAGCACTCGGCGGTCATGGGGACAGGTGTCGCGTGACCTCGGCAATGGCCTCGGTCAGGGTGTCGTTGCGAAGCTCAGACGCCGCGGGCCAGCGCGGCC  >  NC_014034/1667700‑1667799                                                                                                                                                                                                                                                            CGACACGACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCCGGCCGAGTGCCTG                                                                                                     >  2:2664633/1‑101 (MQ=18)                           ttccgatctGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGA                                                                                                    <  2:1576659/92‑1 (MQ=255)                            accCGACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGAA                                                                                                   <  1:2472564/98‑1 (MQ=25)                            ACACGACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGAA                                                                                                   <  2:97278/101‑1 (MQ=35)                            ACACGACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGAA                                                                                                   <  1:527675/101‑1 (MQ=35)                            ACACGACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGGGCCTGAA                                                                                                   >  2:4221631/1‑101 (MQ=1)                              cCGACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGAAGC                                                                                                 <  1:26102/100‑1 (MQ=38)                              agGACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCGGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGGCGAGTGCCTGAAGC                                                                                                 <  1:2929564/99‑1 (MQ=255)                              ACGACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGAAGC                                                                                                 <  2:3273322/101‑1 (MQ=38)                                 ACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCCCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGAAGCACT                                                                                              <  1:3486155/101‑1 (MQ=255)                                 ACCGCCAACCCCAGGTGCAAGAGAGGCGAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGAAGCACT                                                                                              <  2:3844555/101‑1 (MQ=255)                                   CGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGAAGCACTCG                                                                                            <  2:2457085/101‑1 (MQ=255)                                    GCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGGGCCTGAAGatcggaa                                                                                           >  1:1576768/1‑94 (MQ=2)                                      CAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGAAGCACTCGGCG                                                                                         >  2:2502848/1‑101 (MQ=255)                                      CAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCTGAAGCACTCGGCG                                                                                         <  1:2109061/101‑1 (MQ=255)                                        ATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTTGCCGAGTGACTGAAGCACTCGGCGGc                                                                                       >  2:4134792/1‑100 (MQ=255)                                         TCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGGCGAGGGCCTGAAGCACTCGGCGGcg                                                                                      >  2:1840926/1‑99 (MQ=255)                                                                                                                                                                                                                                   TTTCCCCGCCCGCAGCGCAACGCCTCGACACGACCGCCAATCCCAGGTGCAACAGAGGCCAGCGCCCGGCCCGGGCGGCTCGAAAGCGCCCGCCATGGGGCGGGGCGGGCGCTGGCCGAGTGCCT....................................................................................................  <  NC_014034/772604‑772480 ....................................................................................................CGGGGCGGGCGCTGGCCGAGTGCCTGAAGCACTCGGCGGTCATGGGGACAGGTGTCGCGTGACCTCGGCAATGGCCTCGGTCAGGGTGTCGTTGCGAAGCTCAGACGCCGCGGGCCAGCGCGGCC  >  NC_014034/1667700‑1667799 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG