New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1103358 =	92 (0.440)	36 (0.170)	13/196	23.3	0.36	intergenic (‑358/+60)	ugpB/regA2	sn‑glycerol‑3‑phosphate‑binding periplasmic protein ugpB/photosynthetic apparatus regulatory protein RegA
	?	NC_014034	1253897 =	35 (0.170)					intergenic (+55/+36)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
Rejected: Position hash score below cutoff.

TGCGCCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTCGCCCG  >  NC_014034/1103259‑1103458                                                                                                    |                                                                                                     tGCGCCCCGGGAGGCAGGCGGACCAGCGCCGCGAAGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATccgccg                                                                                                     >  2:136703/1‑101 (MQ=255) tGCGCCCCGGAAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATccgccg                                                                                                     >  1:3657708/1‑101 (MQ=255)  gcgcCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCgg                                                                                                    >  2:3503452/1‑101 (MQ=255)  gcgcCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCgg                                                                                                    <  2:2925905/101‑1 (MQ=255)   cgcCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCggg                                                                                                   <  1:3208625/101‑1 (MQ=255)   cgcCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCggg                                                                                                   <  2:2097745/101‑1 (MQ=255)   cgcCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCggg                                                                                                   <  2:2253350/101‑1 (MQ=255)    gcCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCgggg                                                                                                  >  1:439643/1‑101 (MQ=255)    gcCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCgggg                                                                                                  >  1:3370559/1‑101 (MQ=255)       cggggAGGCAGGGGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCt                                                                                               <  2:1255354/99‑1 (MQ=255)        cGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTc                                                                                              <  2:2064154/101‑1 (MQ=255)            aggcaggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGcc                                                                                          <  1:664704/101‑1 (MQ=255)             ggcaggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGccc                                                                                         <  2:1092962/101‑1 (MQ=255)               caggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGccccc                                                                                       <  2:1781648/101‑1 (MQ=255)               caggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGccccc                                                                                       <  1:300374/101‑1 (MQ=255)               caggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGccccc                                                                                       >  2:560024/1‑101 (MQ=255)               caggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGccccc                                                                                       <  1:1852247/101‑1 (MQ=255)                aggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCg                                                                                      <  1:978780/101‑1 (MQ=255)                 ggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCgg                                                                                     <  2:3135039/101‑1 (MQ=255)                 ggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCgg                                                                                     <  1:560088/101‑1 (MQ=255)                  gcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGa                                                                                    <  2:1268792/101‑1 (MQ=255)                   cGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGAc                                                                                   <  1:3537055/101‑1 (MQ=255)                    ggACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCCCCCCCGGAcc                                                                                  >  1:2616269/1‑101 (MQ=255)                    ggACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGAGCGGCGATCCGCCGCGGGGGCCCcccccccccc                                                                                  >  1:3623549/1‑96 (MQ=37)                      aCCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGTCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGAcccc                                                                                <  2:3657455/101‑1 (MQ=255)                      aCCGGCGCCGCGACGGAGAGGACCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGAcccc                                                                                <  2:2322059/101‑1 (MQ=255)                       ccGGCGCCGCGACGGAGAGGCCCGACCGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGAccccc                                                                               <  2:3624954/101‑1 (MQ=255)                        cGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCGCCCGGACCCCCg                                                                              <  1:2299164/101‑1 (MQ=255)                         ggCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCgg                                                                             <  1:901880/101‑1 (MQ=255)                         ggCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCgg                                                                             >  1:3460221/1‑101 (MQ=255)                          gcgcCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGGGCCGCCCCCCGGCCCCCCGc                                                                            >  1:2236838/1‑101 (MQ=37)                          gcgcCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGc                                                                            >  2:1082853/1‑101 (MQ=255)                          gccccgcTACGGAGAGGTCCGAGCGCGGGGGCCGCCAGGGGGCGTTTTCGCTGCGAGGCCGTGCGGCGATCCGCCGGGGGCTCCGCCCTCGGACCCCCGGc                                                                            <  2:3208346/98‑1 (MQ=18)                            gccgcGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGt                                                                          <  1:1518169/101‑1 (MQ=255)                            gccgcGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGt                                                                          <  1:2148085/101‑1 (MQ=255)                             ccgcGAGGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTa                                                                         <  1:717186/101‑1 (MQ=255)                               gcgCCGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGTCGATTTCGCCGCGCGTCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCTGACCCCCGGCGTAtt                                                                       <  1:3134239/101‑1 (MQ=21)                               gcgACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTAtt                                                                       <  2:3885102/101‑1 (MQ=255)                                cgACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTAttt                                                                      <  1:3256512/101‑1 (MQ=255)                                  gcGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTgg                                                                    <  2:1201364/100‑1 (MQ=255)                                   cGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCCGACCCCCGGCGGATTTtgg                                                                   >  2:3741389/1‑101 (MQ=255)                                   cGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTACGCCCCCGGACCCCCCGccgtcttagg                                                                   >  2:4115117/1‑92 (MQ=25)                                    ggAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGc                                                                  <  2:279613/101‑1 (MQ=255)                                    ggAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGc                                                                  >  1:543065/1‑101 (MQ=255)                                    ggAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGGATTTGGGc                                                                  >  2:3747363/1‑101 (MQ=255)                                     gagaGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGcc                                                                 <  1:2930648/101‑1 (MQ=255)                                     gagaGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGCATTTGGGcc                                                                 >  1:696682/1‑101 (MQ=255)                                      agagGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCa                                                                <  1:1039338/101‑1 (MQ=255)                                       gagGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCaa                                                               <  1:1778508/101‑1 (MQ=255)                                       ctcttCCGATCTCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCaa                                                               <  1:1569169/97‑1 (MQ=255)                                        agGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAg                                                              <  2:3550471/101‑1 (MQ=255)                                        agGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAg                                                              <  1:3468798/101‑1 (MQ=255)                                        agGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAg                                                              <  2:864609/101‑1 (MQ=255)                                         ggTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGa                                                             <  1:1332451/101‑1 (MQ=255)                                         ggTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGa                                                             <  1:518938/101‑1 (MQ=255)                                          gTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGaa                                                            <  2:159679/101‑1 (MQ=255)                                          gTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGaa                                                            <  1:558452/101‑1 (MQ=255)                                           tCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGaaa                                                           >  2:575982/1‑101 (MQ=255)                                              gAACGCGGGGGGCTCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGaaaaaa                                                        <  2:205219/101‑1 (MQ=255)                                              gAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGTGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGaaaaaa                                                        <  1:3609809/101‑1 (MQ=255)                                              gAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGaaaaaa                                                        >  2:2802496/1‑101 (MQ=255)                                               aaCGCGGGGGGCGCGTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAAc                                                       <  2:4151671/101‑1 (MQ=255)                                                aCGCGGGGGGCGCCTGGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACg                                                      <  2:3628747/101‑1 (MQ=255)                                                       gggCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCg                                               <  1:3169/101‑1 (MQ=255)                                                          cgcCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCgggg                                            <  2:3957688/101‑1 (MQ=255)                                                          cgcCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCgggg                                            <  2:636626/101‑1 (MQ=255)                                                            ccTCGGGGCGATTTCGCCGCGCGGCCGCGCGGGGAGCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAATAAACGGGGGCCGGGGAt                                          <  1:1370459/101‑1 (MQ=255)                                                            ccTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGAt                                          <  2:2014624/101‑1 (MQ=255)                                                               cGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAg                                       <  2:3916467/101‑1 (MQ=255)                                                               cGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGCATTTGGGCCAAGAAAAAACGGGGGCCGGGGGTCAg                                       >  1:2461097/1‑101 (MQ=255)                                                                ggggCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGt                                      <  2:3189675/101‑1 (MQ=255)                                                                ggggCGATTGCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGt                                      <  2:1648850/101‑1 (MQ=255)                                                                    taaTTTCGCCGCGGGGCGGCGAGTCGATCCGCCGGGGGGTCCGCCACCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTc                                  <  1:2798834/99‑1 (MQ=17)                                                                    cGATTTCGCCGCGCGGCCGCGCGGCGAGCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTc                                  <  2:2689815/101‑1 (MQ=255)                                                                    cGATTCCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTc                                  <  1:924101/101‑1 (MQ=255)                                                                       tttCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGGTCAGTCCTCGaa                               >  2:257836/1‑101 (MQ=255)                                                                       tttCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGaa                               >  1:1604277/1‑101 (MQ=255)                                                                         tCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAAt                             <  2:3825132/101‑1 (MQ=255)                                                                         tCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAAt                             <  2:153207/101‑1 (MQ=255)                                                                            ccgcgcggccgcgcggCGATCCGCCGGGGGCTCCGCCCCCGCCCCCCCGGCGCATCTGGGCCAAGAAAAAAAGGGGGGCGGGGATCAGCCCTCGAAATAGa                          >  1:2566234/1‑101 (MQ=17)                                                                               cgcggccgcggggcGCTCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCa                       <  2:2861103/101‑1 (MQ=255)                                                                               cgcggccgcgcggcGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCa                       >  2:2309319/1‑101 (MQ=255)                                                                                  ggccgcgcggcGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATgc                    <  2:3370314/101‑1 (MQ=255)                                                                                  ggccgcgcggcGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATgc                    >  1:2808464/1‑101 (MQ=255)                                                                                    ccgcgcggcGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATgccg                  <  1:824399/101‑1 (MQ=255)                                                                                       cgcggcGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGccc               <  2:724024/101‑1 (MQ=255)                                                                                         cgtcgATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAg             >  2:3074312/4‑101 (MQ=255)                                                                                         cgggtaTCCTCCTGGGGCTCCGCTCCGGGACCGCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAg             <  2:3215886/96‑1 (MQ=25)                                                                                          ggcgATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAgg            <  1:3882272/101‑1 (MQ=255)                                                                                          ggcgATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAACCGATCATGCCGCCCAgg            >  2:1960717/1‑101 (MQ=255)                                                                                              aTCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGGTCAGTCCTCCAAATCGATCATGCCGCCCCGGTCtt        >  2:3763115/1‑101 (MQ=255)                                                                                              aTCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCtt        <  1:1082947/101‑1 (MQ=255)                                                                                              aTCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCtt        >  1:4118959/1‑101 (MQ=255)                                                                                                   ccgGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcgccc   <  1:2852087/101‑1 (MQ=255)                                                                                                    cgGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcgcccg  <  1:136727/101‑1 (MQ=255)                                                                                                    cgGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcgcccg  >  1:562865/1‑101 (MQ=255)                                                                                                    cgGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcgcccg  <  1:607119/101‑1 (MQ=255)                                                                                                    cgGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcgcccg  <  1:1624699/101‑1 (MQ=255)                                                                                                    cgGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCAGGCCGCCCAGGTCTTcgcccc  >  1:3259455/1‑100 (MQ=255)                                                                                                    |                                                                                                     TGCGCCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCGGGGGCTCCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTCGCCCG  >  NC_014034/1103259‑1103458 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG