New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1169983 =177 (0.940)2 (0.010) 2/178 30.9 0.01 coding (665/1434 nt) RCAP_rcc01095 GntR family transcriptional regulator
?NC_014034 3531372 = 185 (0.870)coding (998/1611 nt) aceA isocitrate lyase
Rejected: Position hash score below cutoff.

Only 100 of 215 total aligned reads displayed.

CGCGAGGGCGAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATCGCCGGGATGGTG  >  NC_014034/3531272‑3531472
                                                                                                    |                                                                                                    
 gcgAGGGCGAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCgg                                                                                                     <  1:2623673/101‑1 (MQ=255)
 gcgAGGGCGAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCgg                                                                                                     <  1:540022/101‑1 (MQ=255)
 gcgAGGGCGAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCgg                                                                                                     <  1:1432186/101‑1 (MQ=255)
   gAGGGCGAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCgggg                                                                                                   >  2:3893554/1‑100 (MQ=255)
   gAGGGCGAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGggt                                                                                                   <  1:2635910/101‑1 (MQ=255)
    aGGGCGAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGGGAACGGGGTTTTCCCGTTCCGCCCCGGCACCGGCCCCGCCCggggg                                                                                                  >  2:843916/1‑99 (MQ=255)
    aGGGCGAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCggggg                                                                                                  >  1:1039290/1‑99 (MQ=255)
      ggCGAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGggtggt                                                                                                <  1:1086349/101‑1 (MQ=255)
         gAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGGGGa                                                                                             >  2:1437844/1‑101 (MQ=255)
          aaCTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGGGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGGGGGGGaa                                                                                            >  1:1603078/1‑101 (MQ=255)
          aaCTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAAGGGGCCTTTCCCGTTCCGCCCCGGCACCCGCCGCCCCCGGGGGGGGGac                                                                                            >  1:1868316/1‑100 (MQ=255)
          aaCTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGaa                                                                                            <  2:2386295/101‑1 (MQ=255)
          aaCTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGaa                                                                                            <  2:607400/101‑1 (MQ=255)
           aCTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGGGGGGGAAg                                                                                           >  2:2442517/1‑101 (MQ=255)
           aCTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGCGGGGGAAg                                                                                           >  2:3932781/1‑101 (MQ=255)
             tGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGAt                                                                                         >  1:2040190/1‑101 (MQ=255)
             gggCGCTTTAGCAGACCGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGAt                                                                                         <  2:2256403/100‑1 (MQ=255)
               gcgcTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTg                                                                                       <  2:257920/101‑1 (MQ=255)
                cgcTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGc                                                                                      <  1:649397/101‑1 (MQ=255)
                cgcTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGGGGTGGAAGATTGc                                                                                      >  1:1153707/1‑101 (MQ=255)
                 gcTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGGGGAAGATTGCa                                                                                     >  2:2908181/1‑101 (MQ=255)
                   tttGTCAGACCGGAGACTGCGTCAAGCCGCGGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATc                                                                                   <  1:1777505/101‑1 (MQ=255)
                   tttATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATc                                                                                   <  2:1367714/101‑1 (MQ=255)
                   tttATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGGGGTGGAAGATTGCATc                                                                                   >  1:425290/1‑101 (MQ=255)
                      aTCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGGGGTGGAAGATTTCATCGcc                                                                                >  1:3360102/1‑101 (MQ=255)
                       tCAGAACGGCGCCTTCGTCAAGACGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGGGGTGGGAGATTGCATCGccc                                                                               >  2:633586/1‑100 (MQ=255)
                        cAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTc                                                                              <  1:587570/101‑1 (MQ=255)
                         aGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCg                                                                             <  2:2933742/101‑1 (MQ=255)
                         aGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCg                                                                             <  2:2040052/101‑1 (MQ=255)
                           aaCGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCACGGCACCGGCCGCGCCCGGGTGGGGGTAGATTGCATCGCCTCGCt                                                                           >  2:484754/1‑101 (MQ=255)
                            aCGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTg                                                                          >  1:1983344/1‑101 (MQ=255)
                             cGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGa                                                                         <  1:3149777/101‑1 (MQ=255)
                             cGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGa                                                                         <  1:3399865/101‑1 (MQ=255)
                             cGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGa                                                                         >  2:316815/1‑101 (MQ=255)
                             cGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGa                                                                         <  1:3679213/101‑1 (MQ=255)
                               gcgcCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACg                                                                       <  2:3814948/101‑1 (MQ=255)
                                cgcCTTGGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGc                                                                      <  2:2200864/101‑1 (MQ=255)
                                  ccTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTg                                                                    >  2:2532031/1‑101 (MQ=255)
                                     tCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTgggg                                                                 <  2:169872/101‑1 (MQ=255)
                                       gTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCCCCGGCCGCGCCCGGGGGGTGGAAGATTGCATCGCCTCGCTGACGCTcggggg                                                               >  2:726149/1‑101 (MQ=255)
                                         cAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGgcg                                                             >  1:554994/1‑101 (MQ=255)
                                         cAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGgcg                                                             >  2:4170092/1‑101 (MQ=255)
                                           aGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGcc                                                           <  2:54180/101‑1 (MQ=255)
                                           aGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGcc                                                           <  1:3985882/101‑1 (MQ=255)
                                           aGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGcc                                                           <  2:316337/101‑1 (MQ=255)
                                              cGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGGGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGAt                                                        >  2:1446451/1‑101 (MQ=255)
                                               gCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGGTc                                                       >  1:93262/1‑101 (MQ=255)
                                               gCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATc                                                       <  2:3359857/101‑1 (MQ=255)
                                               gCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATc                                                       <  2:2306169/101‑1 (MQ=255)
                                                cAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCt                                                      <  1:2719393/101‑1 (MQ=255)
                                                cAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCt                                                      <  2:2984892/101‑1 (MQ=255)
                                                     gCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTtgt                                                 >  2:2820187/1‑101 (MQ=255)
                                                      cTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTtgtg                                                >  1:2153201/1‑101 (MQ=255)
                                                       tGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTtgtgt                                               >  1:4159037/1‑100 (MQ=255)
                                                       tGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTgg                                               >  2:275288/1‑101 (MQ=255)
                                                       tGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTgg                                               >  2:3081699/1‑101 (MQ=255)
                                                        ggCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGa                                              <  2:3113617/101‑1 (MQ=255)
                                                        ggCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGa                                              <  1:4120263/101‑1 (MQ=255)
                                                         gCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGAt                                             <  1:316860/101‑1 (MQ=255)
                                                         gCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGAt                                             <  1:2333479/101‑1 (MQ=255)
                                                           gAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTTCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCg                                           >  2:1132152/1‑101 (MQ=255)
                                                           gAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCg                                           >  1:841961/1‑101 (MQ=255)
                                                           gAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCg                                           >  2:1484879/1‑101 (MQ=255)
                                                            gaCGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCga                                          <  2:1246415/100‑1 (MQ=255)
                                                            aaCGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGGGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCGTTTGTGGATCga                                          >  1:2092468/1‑101 (MQ=255)
                                                               gggCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGAc                                       >  1:401246/1‑101 (MQ=255)
                                                               gggCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGCGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGGGAc                                       >  1:1478345/1‑101 (MQ=255)
                                                                ggCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGAcc                                      <  1:2798416/101‑1 (MQ=255)
                                                                ggCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGAcc                                      >  1:146099/1‑101 (MQ=255)
                                                                 gCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCg                                     <  2:1265805/101‑1 (MQ=255)
                                                                 gCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCg                                     >  2:4107747/1‑101 (MQ=255)
                                                                  cTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGa                                    <  1:708846/101‑1 (MQ=255)
                                                                   ttttCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGac                                   >  1:3513231/1‑101 (MQ=255)
                                                                   ttttCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGac                                   <  1:2471472/101‑1 (MQ=255)
                                                                    tttCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGacc                                  >  1:2788377/1‑100 (MQ=255)
                                                                     ttCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGacac                                 <  2:1610495/101‑1 (MQ=255)
                                                                     ttCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGacac                                 <  1:99627/101‑1 (MQ=255)
                                                                       cccGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGc                               >  2:369183/1‑101 (MQ=255)
                                                                        ccattCCTCCCAGGCTCCGGCTGCGCCCGGGTGGTGGAAGATTGCATCGCGTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACgtc                              <  2:1752224/98‑3 (MQ=255)
                                                                         cGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCg                             >  2:1099494/1‑101 (MQ=255)
                                                                         cGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCg                             <  1:3022418/101‑1 (MQ=255)
                                                                           ttCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGaa                           >  1:3103433/1‑101 (MQ=255)
                                                                            tCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAAt                          >  1:37241/1‑101 (MQ=255)
                                                                            tCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAAt                          >  2:3793511/1‑101 (MQ=255)
                                                                            tCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAAt                          >  2:3608794/1‑101 (MQ=255)
                                                                             ccgatctggCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATg                         <  2:106789/94‑1 (MQ=255)
                                                                             ccGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATg                         <  1:484811/101‑1 (MQ=255)
                                                                              cGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGt                        <  1:765663/101‑1 (MQ=255)
                                                                                 cccGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGa                     <  1:239467/101‑1 (MQ=255)
                                                                                      cACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGaaa                <  1:2908400/101‑1 (MQ=255)
                                                                                        ccGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATc              <  2:1174170/101‑1 (MQ=255)
                                                                                        ccGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATc              <  1:3813316/101‑1 (MQ=255)
                                                                                           gCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATCGcc           <  1:3891399/101‑1 (MQ=255)
                                                                                            ccGCGCCCGGGTTGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATCGCCg          <  2:1868196/101‑1 (MQ=255)
                                                                                            ccGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATCGCCg          <  2:1560086/101‑1 (MQ=255)
                                                                                            ccGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATCGCCg          >  2:1987554/1‑101 (MQ=255)
                                                                                              gcgcCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATCGCCggg        >  1:62244/1‑101 (MQ=255)
                                                                                                 cccGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATCGCCGGGAtg     <  2:93238/101‑1 (MQ=255)
                                                                                                    gggTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATCGCCGGGAtggtg  <  1:903134/101‑1 (MQ=255)
                                                                                                    gggTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATCGCCGGGAtggtg  <  1:1514094/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CGCGAGGGCGAACTGGCGCTTTATCAGAACGGCGCCTTCGTCAAGCCGCAGCGGCTGGCGAACGGGCTTTTCCCGTTCCGCCCCGGCACCGGCCGCGCCCGGGTGGTGGAAGATTGCATCGCCTCGCTGACGCTGGGGGGCGCCGATCTTTTGTGGATCGAGACCGACACGCCGAATGTCGATGAAATCGCCGGGATGGTG  >  NC_014034/3531272‑3531472

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG