New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 305596 =90 (0.470)4 (0.020) 4/180 28.9 0.03 coding (1347/1386 nt) RCAP_rcc00268 M16 family peptidase
?NC_014034 3023865 = 215 (1.010)intergenic (‑43/+24) chvG/chvI sensor histidine kinase ChvG/transcriptional regulator ChvI
Rejected: Position hash score below cutoff.

Only 100 of 244 total aligned reads displayed.

TTGGCCAGATCCTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCGTTCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATCCACCGTGCGCATCT  >  NC_014034/3023764‑3023965
                                                                                                     |                                                                                                    
ttGGCCAGATCCTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCt                                                                                                      >  1:802030/1‑101 (MQ=255)
 tGGCCAGATCCTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCtt                                                                                                     >  2:2288691/1‑101 (MQ=255)
 tGGCCAGATCCTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGCCACACGCCCCCGCCtt                                                                                                     <  2:529829/101‑1 (MQ=255)
   gCCAGATCCTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTtgc                                                                                                   >  1:3761105/1‑101 (MQ=255)
   gCCAGATCCCCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTtgc                                                                                                   >  2:1954640/1‑101 (MQ=255)
    ccAGATCCTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTtgct                                                                                                  <  2:3236068/101‑1 (MQ=255)
     cAGATCCTCATCGACCGCGCCCGAGGGTGCGACGTAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTtgctg                                                                                                 <  1:3629748/101‑1 (MQ=255)
     cAGATCCTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTtgctg                                                                                                 >  1:3168004/1‑101 (MQ=255)
     cAGATCCTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTtgctg                                                                                                 <  1:3438165/101‑1 (MQ=255)
     cAGATCCTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTtgctg                                                                                                 >  2:1274850/1‑101 (MQ=255)
          ccTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGa                                                                                            <  2:1445345/101‑1 (MQ=255)
          ccTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGa                                                                                            >  1:3715117/1‑101 (MQ=255)
           cTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGaa                                                                                           <  1:2429008/101‑1 (MQ=255)
           cTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGaa                                                                                           <  2:1171976/101‑1 (MQ=255)
            tCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGaaa                                                                                          <  2:2782126/101‑1 (MQ=255)
            tCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGaaa                                                                                          >  2:486855/1‑101 (MQ=255)
            tCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGaaa                                                                                          <  1:3959618/101‑1 (MQ=255)
            tCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGaaa                                                                                          >  2:1018296/1‑101 (MQ=255)
            tCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGaaa                                                                                          <  2:4235525/101‑1 (MQ=255)
              aTCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATc                                                                                        >  2:3249179/1‑101 (MQ=255)
                 gACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCgg                                                                                     >  2:3346157/1‑101 (MQ=255)
                 gACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCgg                                                                                     <  2:3911936/101‑1 (MQ=255)
                  aCCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGc                                                                                    <  1:1306597/101‑1 (MQ=255)
                   ccGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCa                                                                                   <  2:1570059/101‑1 (MQ=255)
                    cgcgCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCaa                                                                                  <  1:10262/101‑1 (MQ=255)
                     gcgcCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAAt                                                                                 <  2:2125442/101‑1 (MQ=255)
                     gcgcCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAAt                                                                                 <  2:267352/101‑1 (MQ=255)
                       gcCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATgg                                                                               <  2:1930612/101‑1 (MQ=255)
                       gcCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATgg                                                                               >  1:2443835/1‑101 (MQ=255)
                        cccGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGt                                                                              <  1:2879889/101‑1 (MQ=255)
                        cccGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGt                                                                              >  1:3328001/1‑101 (MQ=255)
                          cGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCa                                                                            >  1:271080/1‑101 (MQ=255)
                          cGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCa                                                                            <  1:2632158/101‑1 (MQ=255)
                          cGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCa                                                                            <  2:3836243/101‑1 (MQ=255)
                           gAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCAt                                                                           >  1:1229090/1‑101 (MQ=255)
                           gAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCAt                                                                           <  2:2980386/101‑1 (MQ=255)
                            aGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCAtt                                                                          >  2:4021305/1‑101 (MQ=255)
                            aGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCAtt                                                                          <  1:2505778/101‑1 (MQ=255)
                             gggTGCGACACAGTCCTCGCCCAGAACCACATCCG.TCTCGGATCTGGCGGCCTTGGTCACACCCCCCCGCCTCGCTGCAAGAAATCCGGCAATGGTCAttc                                                                         >  2:2404228/1‑101 (MQ=255)
                              ggTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCAttct                                                                        <  2:2241323/101‑1 (MQ=255)
                               gTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCAttctt                                                                       <  2:1646366/101‑1 (MQ=255)
                               gTGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCAttctt                                                                       <  1:2989836/101‑1 (MQ=255)
                                tGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCAttcttc                                                                      >  2:904018/1‑101 (MQ=255)
                                tGCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCAttcttc                                                                      <  1:542900/101‑1 (MQ=255)
                                 gCGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCg                                                                     >  1:2248022/1‑101 (MQ=255)
                                  cGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGt                                                                    >  1:3930290/1‑101 (MQ=255)
                                  cGACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGt                                                                    >  1:1707514/1‑101 (MQ=255)
                                   gACCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGtt                                                                   <  1:2906184/101‑1 (MQ=255)
                                    aCCCAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTg                                                                  <  1:4230945/101‑1 (MQ=255)
                                      ccAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTa                                                                >  2:2603323/1‑101 (MQ=255)
                                       cAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTaa                                                               >  1:2697864/1‑101 (MQ=255)
                                       cAGTCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTaa                                                               >  2:3926750/1‑101 (MQ=255)
                                          tCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGa                                                            <  2:4167403/101‑1 (MQ=255)
                                          tCCTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCAGCAATGGTCATTCTTCGTTGTAACGa                                                            >  1:3552928/1‑101 (MQ=255)
                                           ccTCGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCACGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGAt                                                           >  2:576028/1‑101 (MQ=255)
                                              cGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAAc                                                        >  1:2063273/1‑101 (MQ=255)
                                              cGCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAAc                                                        >  1:3591736/1‑101 (MQ=255)
                                               gCCCAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAAcc                                                       <  2:2941054/101‑1 (MQ=255)
                                                cccAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCg                                                      >  2:1503476/1‑101 (MQ=255)
                                                cccAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCg                                                      <  1:2579780/101‑1 (MQ=255)
                                                  cAGAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGAt                                                    <  1:758038/101‑1 (MQ=255)
                                                    gAACCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGagat                                                  >  2:753905/1‑98 (MQ=255)
                                                     aaCCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGcc                                                 <  2:860828/101‑1 (MQ=255)
                                                     aaCCACATCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGcc                                                 <  1:1109380/101‑1 (MQ=255)
                                                        cacaTCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTa                                              <  1:2004596/101‑1 (MQ=255)
                                                          caTCCG.TCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTaaa                                            <  1:3706007/101‑1 (MQ=255)
                                                              ccgtctcGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCg                                         <  1:3258992/98‑1 (MQ=255)
                                                              ccgtctcGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCg                                         <  2:3275844/98‑1 (MQ=255)
                                                              ccgtctcGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCg                                         <  1:899684/98‑1 (MQ=255)
                                                                  ctcGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGtctc                                     <  1:2288859/101‑1 (MQ=255)
                                                                  ctcGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGtctc                                     <  2:2154037/101‑1 (MQ=255)
                                                                  ctcGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGtctc                                     <  1:146851/101‑1 (MQ=255)
                                                                   tcGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCg                                    <  2:2443651/101‑1 (MQ=255)
                                                                     ggATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGAt                                  <  1:1579149/101‑1 (MQ=255)
                                                                       aTTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCg                                <  1:1848236/101‑1 (MQ=255)
                                                                       aTTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCg                                >  1:2757206/1‑101 (MQ=255)
                                                                         ttCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGcc                              >  2:448018/1‑101 (MQ=255)
                                                                         ttCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGcc                              <  1:698967/101‑1 (MQ=255)
                                                                         ttCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGGTGTAACGATAACCGATGCCGCAAAGCGTCTCGATCGcc                              >  2:1337880/1‑101 (MQ=255)
                                                                          tCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCg                             <  2:2017703/101‑1 (MQ=255)
                                                                          tCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCg                             <  2:4078905/101‑1 (MQ=255)
                                                                           cgcgGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCga                            >  1:2160965/1‑101 (MQ=255)
                                                                           cgcgGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCga                            >  1:3102859/1‑101 (MQ=255)
                                                                           cgcgGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCga                            <  1:3467174/101‑1 (MQ=255)
                                                                           cgcgGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCga                            <  2:359460/101‑1 (MQ=255)
                                                                                 cTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATc                      <  2:3014764/101‑1 (MQ=255)
                                                                                 cTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATc                      >  2:1832282/1‑101 (MQ=255)
                                                                                   tGGACACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGt                    >  2:1653592/1‑101 (MQ=255)
                                                                                    ggTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTc                   >  2:3721093/1‑101 (MQ=255)
                                                                                      tCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCAt                 <  1:1648496/101‑1 (MQ=255)
                                                                                        acacGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATcc               >  2:3558168/1‑101 (MQ=255)
                                                                                        acacGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATcc               <  1:46226/101‑1 (MQ=255)
                                                                                          ccGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATCCAc             <  1:4021565/100‑1 (MQ=255)
                                                                                            gCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATCCACCg           <  2:2697658/101‑1 (MQ=255)
                                                                                             cccccGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATCCACCGt          >  1:1173648/1‑101 (MQ=255)
                                                                                              ccccGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATCCACCGTg         <  1:409095/101‑1 (MQ=255)
                                                                                              ccccGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATCCACCGTg         >  1:600569/1‑101 (MQ=255)
                                                                                                ccGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATCCACCGTgcg       >  1:3813875/1‑101 (MQ=255)
                                                                                                    cTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATCCACCGTGCGCAtc   >  2:2852237/1‑101 (MQ=255)
                                                                                                     ttGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATCCACCGTGCGCAtct  >  2:3709709/1‑101 (MQ=255)
                                                                                                     |                                                                                                    
TTGGCCAGATCCTCATCGACCGCGCCCGAGGGTGCGACCCAGTCCTCGCCCAGAACCACATCCGTTCTCGGATTTCGCGGCCTTGGTCACACGCCCCCGCCTTGCTGCAAGAAATCCGGCAATGGTCATTCTTCGTTGTAACGATAACCGATGCCGTAAAGCGTCTCGATCGCCGAGAAATCGTCATCCACCGTGCGCATCT  >  NC_014034/3023764‑3023965

Base quality scores:  ATCG  < 3 ≤  ATCG  < 25 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG