New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 405177 =204 (1.080)2 (0.010) 2/178 30.9 0.01 coding (1038/1326 nt) RCAP_rcc00376 divalent ion symporter
?NC_014034 = 3167174 191 (0.900)coding (1166/2322 nt) clpA ATP‑dependent Clp protease ATP‑binding subunit ClpA
Rejected: Position hash score below cutoff.

Only 100 of 209 total aligned reads displayed.

GTGAACGAGCCCTCGGTCGGCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCGCAGCACCTGCTG  >  NC_014034/3167074‑3167274
                                                                                                    |                                                                                                    
  gAACGAGCCCTCGGTCGGCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGt                                                                                                    >  2:2266029/1‑101 (MQ=255)
      gAGCCCTCGGTCGGCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTcggc                                                                                                >  2:3331636/1‑101 (MQ=255)
       aGCCCTCGGTCGGCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTcggcg                                                                                               >  2:66720/1‑101 (MQ=255)
         cccTCGGTCGGCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGt                                                                                             <  1:1381508/101‑1 (MQ=255)
            tcggtcggCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGa                                                                                          <  1:1014661/101‑1 (MQ=255)
            tcggtcggCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGa                                                                                          <  2:2526318/101‑1 (MQ=255)
            tcggtcggCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGa                                                                                          <  1:196131/101‑1 (MQ=255)
               gtcggCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACt                                                                                       >  2:2918103/1‑101 (MQ=255)
               gtcggCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACt                                                                                       >  2:2415729/1‑101 (MQ=255)
               gtcggCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACt                                                                                       >  2:2002747/1‑101 (MQ=255)
                  ggCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTggc                                                                                    >  1:1686259/1‑101 (MQ=255)
                  ggCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTggc                                                                                    >  1:4021458/1‑101 (MQ=255)
                  ggCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTggc                                                                                    <  1:3135765/101‑1 (MQ=255)
                   gCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGACCTggcg                                                                                   >  2:814131/1‑101 (MQ=255)
                   gCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTggcg                                                                                   >  2:1017002/1‑101 (MQ=255)
                   gCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTggcg                                                                                   <  2:2135259/101‑1 (MQ=255)
                     gACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTggcggc                                                                                 >  2:3610234/1‑101 (MQ=255)
                        aGCATNNAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGgcgcg                                                                              <  1:1971298/101‑1 (MQ=255)
                        aGCAGCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGgcgcg                                                                              <  2:3199731/101‑1 (MQ=255)
                         gCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGgcgcgc                                                                             >  1:1321863/1‑101 (MQ=255)
                          cATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCt                                                                            <  1:3667393/101‑1 (MQ=255)
                           aTCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGCTCAAGTCGGGGGGGGAACTcgcgggccggta                                                                           >  2:533990/1‑94 (MQ=255)
                             cAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGGTCAAGTCGGCGGTGGAACTGGCGGCGCGCTACa                                                                         >  1:3606542/1‑101 (MQ=255)
                             cAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACa                                                                         <  2:24359/101‑1 (MQ=255)
                             cAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACa                                                                         <  1:570758/101‑1 (MQ=255)
                                 aTCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATcaa                                                                     >  1:2301334/1‑99 (MQ=255)
                                  tCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCAt                                                                    >  2:3986038/1‑101 (MQ=255)
                                   ccTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATg                                                                   <  2:1489556/101‑1 (MQ=255)
                                   ccTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATg                                                                   <  2:1320619/101‑1 (MQ=255)
                                    cTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAGGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGa                                                                  >  2:2069547/1‑101 (MQ=255)
                                    cTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGa                                                                  >  1:4084986/1‑101 (MQ=255)
                                     tGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGAc                                                                 <  1:316599/101‑1 (MQ=255)
                                     tGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGAc                                                                 >  1:756156/1‑101 (MQ=255)
                                      gATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGAcc                                                                >  1:3303334/1‑101 (MQ=255)
                                       aTGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCg                                                               >  1:794728/1‑101 (MQ=255)
                                       aTGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGCTGGAACTGGCGGCGCGCTACATCCATGACCg                                                               <  1:3747228/101‑1 (MQ=255)
                                        tGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGc                                                              >  1:4116267/1‑101 (MQ=255)
                                        tGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGc                                                              >  1:2373101/1‑101 (MQ=255)
                                         ggggCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCa                                                             >  2:2388093/1‑101 (MQ=255)
                                            gCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGc                                                          <  2:4098352/101‑1 (MQ=255)
                                              tGAAACCCTATTTCGAGGAACATCGCGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTg                                                        <  1:1223922/101‑1 (MQ=255)
                                              tGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAgaag                                                        <  2:1680776/101‑4 (MQ=255)
                                              tGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTg                                                        >  1:430541/1‑101 (MQ=255)
                                                    ccTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGAc                                                  <  2:115393/101‑1 (MQ=255)
                                                     cTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACa                                                 <  1:2918322/101‑1 (MQ=255)
                                                     cTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACa                                                 >  1:4124799/1‑101 (MQ=255)
                                                     cTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACa                                                 >  2:2511202/1‑101 (MQ=255)
                                                      tATTTCGAGGAACATCACGGCGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACaa                                                <  1:2516298/101‑1 (MQ=255)
                                                      tATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACaa                                                >  1:2241317/1‑101 (MQ=255)
                                                      tATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACaa                                                >  2:3776871/1‑101 (MQ=255)
                                                      tATTTCGAGGAACATCACGACGTGCGATACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACaa                                                >  1:2055500/1‑101 (MQ=255)
                                                       aTTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAg                                               >  1:245351/1‑101 (MQ=255)
                                                        tttCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAgg                                              <  1:3264919/101‑1 (MQ=255)
                                                        tttCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAgc                                              >  2:269857/1‑100 (MQ=255)
                                                         ttCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGc                                             >  1:3334758/1‑101 (MQ=255)
                                                         ttCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGc                                             >  2:1654563/1‑101 (MQ=255)
                                                         ttCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGc                                             >  2:1763293/1‑101 (MQ=255)
                                                          tCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCg                                            <  1:2770945/101‑1 (MQ=255)
                                                            gAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGAt                                          >  2:1841393/1‑101 (MQ=255)
                                                             nnnnncNNCACGACGTGNGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATc                                         <  2:1714931/96‑1 (MQ=255)
                                                             aGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATc                                         >  1:3340727/1‑101 (MQ=255)
                                                                aaCATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGAc                                      >  1:641612/1‑101 (MQ=255)
                                                                aaCATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGAc                                      >  2:3839328/1‑101 (MQ=255)
                                                                 aCATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACg                                     >  2:3574111/1‑101 (MQ=255)
                                                                   aTCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTg                                   <  2:930325/101‑1 (MQ=255)
                                                                    tCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGa                                  <  1:397388/101‑1 (MQ=255)
                                                                    tCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGa                                  >  2:3292331/1‑101 (MQ=255)
                                                                       cgacgTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcg                               <  2:430484/101‑1 (MQ=255)
                                                                       cgacgTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcg                               <  2:3428497/101‑1 (MQ=255)
                                                                        gacgTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcga                              >  1:2182122/1‑101 (MQ=255)
                                                                        gacgTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcga                              <  1:2853857/101‑1 (MQ=255)
                                                                        gacgTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcga                              <  1:3365960/101‑1 (MQ=255)
                                                                         acgTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcgac                             <  2:794650/101‑1 (MQ=255)
                                                                         acgTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcgac                             >  2:278745/1‑101 (MQ=255)
                                                                          cgTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcgacg                            <  2:3995205/101‑1 (MQ=255)
                                                                           gTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcgacga                           <  1:515444/101‑1 (MQ=255)
                                                                           gTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcgacga                           <  1:3843247/101‑1 (MQ=255)
                                                                           gTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATcgacga                           >  1:3423625/1‑101 (MQ=255)
                                                                            tGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAg                          <  1:1290241/101‑1 (MQ=255)
                                                                            tGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAg                          >  1:949657/1‑101 (MQ=255)
                                                                              cgcTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGc                        >  2:2060747/1‑101 (MQ=255)
                                                                                 tACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCggg                     <  1:1481059/101‑1 (MQ=255)
                                                                                  acacCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGCCAAGGCGATCGACGTGATCGACGCGGCgggg                    >  2:1116343/1‑101 (MQ=255)
                                                                                  acacCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCgggg                    >  1:1566308/1‑101 (MQ=255)
                                                                                   cacCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCggggg                   <  2:3340482/101‑1 (MQ=255)
                                                                                      cAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGCTCGACGTGATCGACGAGGCGGGggggg                >  2:1038047/1‑101 (MQ=255)
                                                                                       aaCGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGAGCGACGAGGCGGGggaggc               >  2:2824822/1‑101 (MQ=255)
                                                                                        acgacgCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGgcggcg              <  2:2994159/101‑1 (MQ=255)
                                                                                        accgcgcgATCAAGGCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGgcggcg              <  1:814212/97‑1 (MQ=255)
                                                                                         cgacgCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGgcgc             >  1:1843061/1‑101 (MQ=255)
                                                                                          gacgCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCgca            >  1:2688280/1‑101 (MQ=255)
                                                                                          gacgCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCgca            <  2:3676491/101‑1 (MQ=255)
                                                                                            cgcgATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCgcagc          <  2:4031123/101‑1 (MQ=255)
                                                                                            cgcgATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCgcagc          <  2:86291/101‑1 (MQ=255)
                                                                                              cgATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCGCGGCAc        >  2:387811/1‑101 (MQ=255)
                                                                                               ggtCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCGCAGCAcc       >  1:2811273/3‑101 (MQ=255)
                                                                                                 tCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCGCAGCACctg     <  1:4139446/101‑1 (MQ=255)
                                                                                                   aaGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCGCAGCACctgct   <  2:2644641/101‑1 (MQ=255)
                                                                                                    aGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCGCAGCACctgctg  <  1:2940587/101‑1 (MQ=255)
                                                                                                    aGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCGCAGCACctgccg  >  1:1630471/1‑99 (MQ=255)
                                                                                                    |                                                                                                    
GTGAACGAGCCCTCGGTCGGCGACAGCATCAAGATCCTGATGGGGCTGAAACCCTATTTCGAGGAACATCACGACGTGCGCTACACCAACGACGCGATCAAGTCGGCGGTGGAACTGGCGGCGCGCTACATCCATGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAGGCGGGGGCGGCGCAGCACCTGCTG  >  NC_014034/3167074‑3167274

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG