Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,532,0991.→C 1.6% 1.7 0.0 ‑0.1193intergenic (+18/‑9)fldA/RCAP_rcc01422flavodoxin/hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (2/1):  ref base (102/88):  total (104/89)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.46e-01

Only 100 of 218 total aligned reads displayed.

ATCAGGCGGCGCTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGCAAGATGATGT  >  NC_014034/1531999‑1532199
                                                                                                     |                                                                                                    
aTCAGGCGGCGCTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGTAGTTTTTCTTGCCCCCGAAAgg                                                                                                       >  2:1250033/1‑101 (MQ=255)
 tCAGGCGGCGCTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.c                                                                                                     <  2:1560668/101‑1 (MQ=255)
   aGGCGGCGCTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.ccc                                                                                                   >  1:88314/1‑101 (MQ=255)
     gcggggCTGAGGCCCGAGCGGCCCAAGGGCTGGCTGTCGCTGATCGCGGCCGGTTTCGGCTTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.ccccc                                                                                                 <  2:2704956/101‑1 (MQ=255)
      cggcgCTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.cccccc                                                                                                >  2:188688/1‑101 (MQ=255)
      cggcgCTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.cccccc                                                                                                <  1:1588446/101‑1 (MQ=255)
        gcgcTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.cccccccc                                                                                              >  2:794982/1‑101 (MQ=255)
         cgcTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGGCTGATCGCTTGCCCCGGAAAGG.CCCCCccca                                                                                             <  1:3764886/101‑1 (MQ=255)
         cgcTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.ccccccccc                                                                                             >  1:1738311/1‑100 (MQ=255)
         cgcTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCccca                                                                                             <  1:1845234/101‑1 (MQ=255)
         cgcTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCccca                                                                                             <  2:1117926/101‑1 (MQ=255)
          gcTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccat                                                                                            <  2:1856120/101‑1 (MQ=255)
          gcTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccat                                                                                            >  2:137411/1‑101 (MQ=255)
           cTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatg                                                                                           <  1:3195639/101‑1 (MQ=255)
            tGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatga                                                                                          >  2:591820/1‑101 (MQ=255)
            tGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatga                                                                                          >  1:263076/1‑101 (MQ=255)
            tGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCACGGCCCATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatga                                                                                          <  1:2102673/101‑1 (MQ=255)
              ccGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGAGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaa                                                                                        <  1:1417307/100‑1 (MQ=255)
               cGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaag                                                                                       <  1:782534/101‑1 (MQ=255)
               cGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaag                                                                                       <  1:1007983/101‑1 (MQ=255)
                 cccGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagac                                                                                     >  2:3135056/1‑101 (MQ=255)
                 cccGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagac                                                                                     <  2:3688906/101‑1 (MQ=255)
                 cccGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagac                                                                                     <  1:3367902/101‑1 (MQ=255)
                  ccGCGCGGCTCAAGGGCTGGCTGGCGCTGCTCGCGGCGAGTTGCGGCGTTGCCCTGCCTGCATGATCCCTTACCCCGGAAAGG.CCCCCcccatgaaagacc                                                                                    <  1:1044671/101‑1 (MQ=255)
                   cGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacct                                                                                   >  1:3706447/1‑101 (MQ=255)
                    gAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctg                                                                                  <  2:1444873/101‑1 (MQ=255)
                    gAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctg                                                                                  <  1:2727124/101‑1 (MQ=255)
                     aGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgc                                                                                 >  2:2412617/1‑101 (MQ=255)
                          ctaaaGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagccctgcccatg                                                                            <  2:4001057/98‑1 (MQ=255)
                          cTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatg                                                                            >  2:1087061/1‑101 (MQ=255)
                          cTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatg                                                                            <  2:3927266/101‑1 (MQ=255)
                          cTCAAGCGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatg                                                                            <  2:2782248/101‑1 (MQ=255)
                           tCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagccctgcccatga                                                                           >  1:3725096/1‑101 (MQ=255)
                           tCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatga                                                                           >  2:1170651/1‑101 (MQ=255)
                           tCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatga                                                                           >  2:4042628/1‑101 (MQ=255)
                             aaGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaa                                                                         >  2:4172109/1‑101 (MQ=255)
                             aaGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaa                                                                         >  2:1312272/1‑101 (MQ=255)
                             aaGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaa                                                                         >  2:2747526/1‑101 (MQ=255)
                             aaGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGACCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaa                                                                         >  1:181886/1‑101 (MQ=255)
                              aGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaag                                                                        <  1:2230282/101‑1 (MQ=255)
                               gggCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaaga                                                                       <  2:749205/101‑1 (MQ=255)
                               gggCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaaga                                                                       >  2:2050763/1‑101 (MQ=255)
                                ggctggctGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaagac                                                                      <  2:2942390/101‑1 (MQ=255)
                                 gctggctgTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaagacc                                                                     <  2:1901207/101‑1 (MQ=255)
                                  ctggctgTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaagacct                                                                    <  2:2734534/101‑1 (MQ=255)
                                  ctggctgTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaagacct                                                                    >  2:3856315/1‑101 (MQ=255)
                                  ctggctgTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaagacct                                                                    <  2:230014/101‑1 (MQ=255)
                                   tggctgTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGGCCCCCCcccatgaaagacctgcccatgaaagacct                                                                    >  1:315717/1‑101 (MQ=255)
                                   tggctgTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCcccatgaaagacctgcccatgaaagacctg                                                                   <  2:2627280/101‑1 (MQ=255)
                                        gTCGCTGGTCGAGGCCGTTTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCt                                                              <  1:4083953/101‑1 (MQ=255)
                                        gTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCt                                                              <  1:2974981/101‑1 (MQ=255)
                                         tCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTg                                                             <  2:88290/101‑1 (MQ=255)
                                         tCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTg                                                             >  1:3248932/1‑101 (MQ=255)
                                         tCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTg                                                             <  1:591884/101‑1 (MQ=255)
                                           gCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTc                                                           <  1:526324/101‑1 (MQ=255)
                                              gATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGcc                                                        >  1:598779/1‑101 (MQ=255)
                                                tCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCcg                                                      >  1:4058615/1‑101 (MQ=255)
                                                  gcgGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCcgcg                                                    <  1:1892555/101‑1 (MQ=255)
                                                   cgGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGa                                                   >  2:3305731/1‑101 (MQ=255)
                                                     gCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGAcc                                                 <  1:2735233/101‑1 (MQ=255)
                                                      ccGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCg                                                >  2:3210216/1‑101 (MQ=255)
                                                      ccGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCg                                                <  1:2918897/101‑1 (MQ=255)
                                                       cGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGa                                               <  2:54029/101‑1 (MQ=255)
                                                       cGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGa                                               >  2:3268458/1‑101 (MQ=255)
                                                       cGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGa                                               >  1:486227/1‑101 (MQ=255)
                                                          tttCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGc                                            >  2:249787/1‑101 (MQ=255)
                                                           ttCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGCCCTGCCCCTGTCGCCCGCGACCGATGcc                                           >  1:2790690/1‑101 (MQ=255)
                                                           ttCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGCTGcc                                           >  1:2356057/1‑101 (MQ=255)
                                                              ggCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCcgc                                        >  1:2309276/1‑101 (MQ=255)
                                                               gCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGCCCGATGCCcgcg                                       >  2:1758033/1‑101 (MQ=255)
                                                               gCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCcgcg                                       >  2:11751/1‑101 (MQ=255)
                                                               gCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCcgcg                                       >  1:627605/1‑101 (MQ=255)
                                                                ccTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCCGCCCCGGTCGCCCGCGACCCGTGCCCgcgc                                      >  2:1675658/1‑101 (MQ=255)
                                                                 cTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGcgcc                                     <  2:181848/101‑1 (MQ=255)
                                                                 cTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGcgcc                                     <  1:1087155/101‑1 (MQ=255)
                                                                    gccctgcctgCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCgccgcc                                  <  1:2696214/99‑1 (MQ=255)
                                                                      cctgcctgCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCgcccc                                >  2:2660710/1‑101 (MQ=255)
                                                                      cctgcctgCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCgcccc                                >  1:2801002/1‑101 (MQ=255)
                                                                        tgcctgcATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCgccccgc                              >  2:1211335/1‑100 (MQ=255)
                                                                        tgcctgcATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCCCCgccccgg                              >  1:2008107/1‑101 (MQ=255)
                                                                               aTGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCcccggccccggc                       >  1:2510293/1‑101 (MQ=255)
                                                                                tGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCccggccccggcc                      <  1:1243785/101‑1 (MQ=255)
                                                                                tGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCccggccccggcc                      >  2:2845764/1‑101 (MQ=255)
                                                                                tGACCGCTTGCCCC.GAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCCCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCcg                     <  1:2825691/101‑1 (MQ=255)
                                                                                 gATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCcg                     <  1:3270075/101‑1 (MQ=255)
                                                                                  aTCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGTCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCcgc                    >  1:3570636/1‑101 (MQ=255)
                                                                                  aTCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCcgc                    >  1:3435710/1‑101 (MQ=255)
                                                                                       ttGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCt               <  2:349584/101‑1 (MQ=255)
                                                                                        tGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTg              >  1:1272491/1‑101 (MQ=255)
                                                                                        tGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTg              >  1:774549/1‑101 (MQ=255)
                                                                                        tGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTg              >  2:3637279/1‑101 (MQ=255)
                                                                                          ccccGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGc            <  2:2096522/101‑1 (MQ=255)
                                                                                            ccGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGCaa          >  2:3059205/1‑101 (MQ=255)
                                                                                             cGGAAAGGCCCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGCaa          <  1:3938389/101‑1 (MQ=255)
                                                                                              ggAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGCAAga        >  2:3030113/1‑101 (MQ=255)
                                                                                               gAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGCAAgat       >  1:2635942/1‑101 (MQ=255)
                                                                                                aaggg.CCCCCCCCATGAAAGCCCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGCAAgatg      <  2:2355881/98‑1 (MQ=255)
                                                                                                aaaGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGCAAgatg      >  1:2379753/1‑101 (MQ=255)
                                                                                                   gg.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGCAAGatgatg   >  2:494479/1‑101 (MQ=255)
                                                                                                    g.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGCAAGATGATGt  <  1:939315/101‑1 (MQ=255)
                                                                                                     |                                                                                                    
ATCAGGCGGCGCTGACGCCCGAGCGGCTCAAGGGCTGGCTGTCGCTGATCGCGGCCGATTTCGGCCTTGTCCTGCCTGCATGATCGCTTGCCCCGGAAAGG.CCCCCCCCATGAAAGACCTGCCCATGAAAGACCTGCCCCTGTCGCCCGCGACCGATGCCCGCGCCGCCCCGGCCCCGGCCGCGCCCTGGCAAGATGATGT  >  NC_014034/1531999‑1532199

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG