Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_014034974,1987.→T100.0% 3.8 5intergenic (+78/+181)RCAP_rcc00884/RCAP_rcc00885hypothetical protein/hypothetical protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (1/4):  ref base (0/0):  total (1/4)

TTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCC.GGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCG.......TCGCCCC.CCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCC  >  NC_014034/974104‑974264
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ttGCCGCCCAACTCGAACCGCCGCCGGAGGGCATTAAAAGGGCGCCCCCG.GGGGCGCTTTTTTTTTTCGCCACGCTGTCGCGGGGCGCCccgccggggggc                                                                      <  2:587195/101‑7 (MQ=255)
  gCCGCGCAACTCCGACCGCCGCCGGATGGCATTCAAAAGGCGCCCCCC.GGGGCGCTTTTTGTTTTCGCCACGCTGTCGCGTGGCGCCccgccggggggctt                                                                    <  2:472273/101‑9 (MQ=255)
                          ggtGGCATCCAAAAGGCCCCCCGG.GGGCCTCTTTTTTTTTTCGCCCCGCTGCCGCGTGGCGCCCCGCCGGGGGGCTTCGCCCC.CCGGACCCCCCAGCGTAt                                           <  2:1070056/99‑1 (MQ=2)
                          gATGGCCATCAAAAGGCCCCCCCCGGGGGCGTTTTTTGTTTCCGCCCCGCTGCCGCGGGGCCCCCCGCCGGGGGGCTTCGCCCC.CCGGACCCCCCAGCGTa                                            <  2:3882409/101‑1 (MQ=2)
                              ccatcaaaagGGCCCCCCCG.GGGGCGCTTTTTGTTTCCGCCCGGCTGGCGGGGGGCGCCCCGCCGGGGGGCTTCGCCCC.CCGGACCCCCCAGCGTATTTGc                                       <  1:112202/95‑1 (MQ=2)
                                        ggCCCCCCGC.GGGGCGTTTTTTGTTCTCGCCCCGCTGTCGCGGGGCCCCCCGCCGGGGGGCTTCGCCCC.CCGGACCCCCCAGCGTATTTGCACCAAGaaaa                             <  2:3535129/101‑1 (MQ=2)
                                                cc.GGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCGGGGGGCTTCGCCCCTCCGGCCCCCCCAGCGTATTTTCCCCAAGAAAAAGCACAc                      >  2:3735460/1‑101 (MQ=12)
                                                                    cGCCACGCTGTCGCGTGGCGACCCGCCGGGGGGCCTCCCCCC.CCCGGCCCCCCCGCGCCTTTTCACCCAGAAAAAACAGACGGGGGGGGTCCGGCACGGcc  >  2:514455/1‑101 (MQ=255)
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TTGCCGCGCAACTCTGAACGCCGCCGGATGGCATTCAAAAGGCGCCCCCC.GGGGCGCCTTTTGTTTTCGCCACGCTGTCGCGTGGCGACCCGCCG.......TCGCCCC.CCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCC  >  NC_014034/974104‑974264

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG