| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,673 | G→C | 6.1% | intergenic (+485/‑446) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,673 | 0 | G→C | 6.1% | 19.3 ‑0.6 ‑0.2 | 181 | intergenic (+485/‑446) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (7/4): ref base (91/79): total (98/83) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.52e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.71e-01 | ||||||||||
Only 100 of 205 total aligned reads displayed.
CCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCC > NC_014034/1395573‑1395773
|
ccccccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATg < 1:1619279/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATg < 2:3511475/101‑1 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGt < 2:1799200/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTa < 2:1890866/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGt < 2:789832/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcg < 2:2098581/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcgg < 2:486335/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcgg > 1:960583/1‑101 (MQ=255)
gggggCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcgg.c > 1:1787378/1‑101 (MQ=255)
gggggCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcgg.c < 1:1941426/101‑1 (MQ=255)
gggggCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcgg.c < 1:661712/101‑1 (MQ=255)
ggCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.Cgg.g < 1:2507234/101‑1 (MQ=255)
gCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.Gc > 1:3153448/1‑101 (MQ=255)
cGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCa < 1:627161/101‑1 (MQ=255)
tGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGt > 2:443055/1‑101 (MQ=255)
tCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGa < 1:4022781/101‑1 (MQ=255)
tCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGa < 1:1083374/101‑1 (MQ=255)
cGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.g < 1:546559/101‑1 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGC.Gc > 2:3439396/1‑101 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.Gc < 2:1936796/101‑1 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.Gc > 1:2611421/1‑101 (MQ=255)
aaaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.Gcc > 1:3930954/1‑101 (MQ=255)
aaaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.Gcc > 1:636931/1‑101 (MQ=255)
aaCCACCTTGCGGATTGTAACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCg > 2:524881/1‑101 (MQ=255)
accTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAgc > 2:4198786/1‑100 (MQ=255)
tGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCt < 1:1699823/101‑1 (MQ=255)
tGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCt > 1:893133/1‑101 (MQ=255)
ggggATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTc < 2:660294/99‑1 (MQ=255)
cGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcc > 1:1327968/1‑101 (MQ=255)
cGGATTCTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAACCATCTGCATGTAGTCGG.CGG.GCAGTTCGC.GCCG.CAGTCGCTcc > 2:578748/1‑101 (MQ=255)
gATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcccc < 2:174846/101‑1 (MQ=255)
aTTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTccccc > 1:591557/1‑101 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcccccc < 2:2154351/101‑1 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcccccc < 2:3398002/101‑1 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcccccc < 1:1592225/101‑1 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcccccc > 2:1159018/1‑101 (MQ=255)
tGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCcg > 2:2614954/1‑101 (MQ=255)
tttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCggggg > 1:2091141/1‑101 (MQ=255)
ttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGc < 2:3874758/101‑1 (MQ=255)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTg > 2:3624233/10‑101 (MQ=2)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTg > 1:3257903/10‑101 (MQ=2)
gggggCGAGGCGGCGCTCCCCCCGCGGGGGCGGGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTgg < 2:1832047/100‑1 (MQ=255)
gggggCGAAGCGTCCCCCCCCCCGCGGGGGCGGGGATCGAAACATCTGCATGTGGTCGG.CGG.GGAGTTGGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTgg < 1:3893157/100‑1 (MQ=38)
cgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTgg > 2:599265/1‑101 (MQ=255)
ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGa > 1:2549836/1‑101 (MQ=255)
ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGa < 1:348264/101‑1 (MQ=255)
gggCGAAGCGTCGCCCCCCCCGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:765578/101‑1 (MQ=255)
ggCGAAGCGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGGATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2794140/101‑1 (MQ=255)
gccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTGGAt < 2:2750288/95‑1 (MQ=2)
ccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTGGATc < 2:3387133/96‑1 (MQ=2)
ctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:4104645/99‑1 (MQ=2)
catcGTCGCTCCCCCCGCGGGGACGTGGATCGAATCCTATGAGGGCTGGCGGCCCG.GTCGTTGAT.CCCGCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 2:3165394/98‑1 (MQ=0)
tgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:2362919/2‑101 (MQ=2)
gCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt > 1:2687011/1‑101 (MQ=255)
ggccGCGCCCCCGGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg < 1:598615/98‑1 (MQ=37)
cggcGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg < 1:3325631/98‑1 (MQ=255)
cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaaaa > 2:3298710/1‑99 (MQ=2)
cGTCGCCCCCCCCGCGGGGGCGGGTATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTCCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg < 2:2250636/101‑1 (MQ=37)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgg > 2:3709900/1‑101 (MQ=255)
gTCGCCCCCCCCGCGGGGGCGTGGATCAAAACATCTGCATGTAGTGGG.CGG.GCAGTCCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgg < 1:848499/101‑1 (MQ=37)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACTgga > 1:1031621/1‑100 (MQ=255)
ccGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGt < 1:1816451/100‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTggga > 2:3414626/1‑99 (MQ=255)
cGCCCCCCCCGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTa < 1:2922167/101‑1 (MQ=255)
cttcccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGGAACTGGTATg > 2:875290/4‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATgg > 2:1603454/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCt < 1:3439648/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCt < 1:4199048/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCt < 2:3153209/101‑1 (MQ=255)
ggggggcCGTGAATCGAAACATCTGGTTGTGGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgc < 2:1048267/99‑1 (MQ=37)
gcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgc > 1:1403156/1‑101 (MQ=255)
gggggCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgcgc > 2:3200016/1‑101 (MQ=255)
ggggCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCa > 2:2084684/1‑101 (MQ=255)
gggCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCaa > 2:2959342/1‑101 (MQ=255)
gggCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCaa > 1:3001028/1‑101 (MQ=255)
ggCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCaaa < 2:433997/101‑1 (MQ=255)
gCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAAc > 1:2737661/1‑101 (MQ=255)
tGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGa > 1:3518232/1‑101 (MQ=255)
gggATCGAACCATCTGCACGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGa < 2:1913152/100‑1 (MQ=255)
gggtCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa > 1:2416128/4‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa < 1:3069006/101‑1 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa < 1:3194024/101‑1 (MQ=255)
ggATCGAAACAGCTGCATGTAGGCGG.GGG.CCAGTGCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa < 2:2476630/101‑1 (MQ=37)
gATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaaa > 2:1187649/1‑101 (MQ=255)
gATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaaa < 2:3930694/101‑1 (MQ=255)
gATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAATGGTATCGGTCTGGCGCAAACGGaag > 2:3092418/1‑100 (MQ=255)
gAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCt < 2:4028524/101‑1 (MQ=255)
gAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCt < 2:2609382/101‑1 (MQ=255)
cATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcg > 2:2236579/1‑101 (MQ=255)
aTCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgt > 1:3550556/1‑101 (MQ=255)
tCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgtc > 2:1643354/1‑101 (MQ=255)
cTGCATGTAGGGGG.CGG.GCAGTTCGA.GCCG.CAGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGtcgtcg < 1:2951518/101‑1 (MQ=255)
gCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCt > 2:1465308/1‑101 (MQ=255)
cATGGAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTc < 1:4114201/101‑1 (MQ=255)
gtGTGGTCGG.GGG.GGAGTGGGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 1:2382559/100‑1 (MQ=37)
aggTAGTCGG.GGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 1:979659/99‑1 (MQ=255)
aggTAGTCGG.GGG.GCAGTGCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 1:1494179/99‑1 (MQ=255)
aTGTAGTCGG.CGG.GCATTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 1:3710154/101‑1 (MQ=255)
aTGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc > 2:1290095/1‑101 (MQ=255)
aTGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 2:2686805/101‑1 (MQ=255)
|
CCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCC > NC_014034/1395573‑1395773
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|