| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,687 | G→C | 6.2% | intergenic (+499/‑432) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,687 | 0 | G→C | 6.2% | 17.3 ‑0.3 ‑0.2 | 179 | intergenic (+499/‑432) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (7/4): ref base (94/73): total (101/78) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.59e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.83e-01 | ||||||||||
Only 100 of 201 total aligned reads displayed.
TGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTG > NC_014034/1395588‑1395786
|
tGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGt < 1:3496503/101‑1 (MQ=255)
tGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGt < 2:2642983/101‑1 (MQ=255)
ggATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGtt > 2:4113940/1‑101 (MQ=255)
ggATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGtt > 1:890488/1‑101 (MQ=255)
gATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTc < 1:3322825/101‑1 (MQ=255)
tCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGa < 1:548626/101‑1 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.Gc > 1:2611421/1‑101 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.Gc < 2:1936796/101‑1 (MQ=255)
gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.Gc > 1:2389132/1‑101 (MQ=255)
aaaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.Gcc > 1:636931/1‑101 (MQ=255)
aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCg > 2:2698740/1‑101 (MQ=255)
aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCg < 1:1037329/101‑1 (MQ=255)
aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCg > 1:2944103/1‑101 (MQ=255)
cccccTTGCGGATTGTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.Ca < 1:3983094/98‑1 (MQ=255)
ccaccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.Ca > 2:3412179/1‑101 (MQ=255)
accTTGCGGATTGTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGt < 2:440112/101‑1 (MQ=255)
ccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTc > 1:479137/1‑101 (MQ=255)
tGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCt < 1:1699823/101‑1 (MQ=255)
ggCGGATTGCCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCt < 2:3358922/100‑1 (MQ=255)
ggggATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTc < 2:660294/99‑1 (MQ=255)
cGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcc > 1:1327968/1‑101 (MQ=255)
cGGATTCTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAACCATCTGCATGTAGTCGG.CGG.GCAGTTCGC.GCCG.CAGTCGCTcc > 2:578748/1‑101 (MQ=255)
gATTGTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcccc < 1:664524/101‑1 (MQ=255)
gATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcccc < 2:174846/101‑1 (MQ=255)
aTTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTccccc > 1:591557/1‑101 (MQ=255)
aTTGTCACTTTCGCGGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTccccc < 2:3389022/101‑1 (MQ=255)
ttGTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcccccc < 1:2132095/101‑1 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcccccc < 2:2154351/101‑1 (MQ=255)
ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTcccccc < 1:1592225/101‑1 (MQ=255)
tGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCcg > 2:2614954/1‑101 (MQ=255)
tCACTTTCGCGGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCcgcg < 2:2943881/101‑1 (MQ=255)
tttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCggggg > 2:429380/1‑101 (MQ=255)
ttCGCGGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGc < 2:48514/101‑1 (MQ=255)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTg > 2:3429367/10‑101 (MQ=2)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTg > 1:3257903/10‑101 (MQ=2)
ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTg > 1:2920285/10‑101 (MQ=2)
cgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTgg > 2:599265/1‑101 (MQ=255)
ggggCGAAGCGTCGCTCCCCCGGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGa > 1:3114965/1‑101 (MQ=255)
ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGa > 2:3654634/1‑101 (MQ=255)
ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGa > 1:2549836/1‑101 (MQ=255)
ggCGAAGCGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGGATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2794140/101‑1 (MQ=255)
gccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTGGAt < 1:3901565/95‑1 (MQ=2)
catcGTCGCTCCCCCCGCGGGGACGTGGATCGAATCCTATGAGGGCTGGCGGCCCG.GTCGTTGAT.CCCGCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 2:3165394/98‑1 (MQ=0)
aGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:4028785/1‑101 (MQ=255)
gCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt > 1:2687011/1‑101 (MQ=255)
ggccGCGCCCCCGGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg < 1:598615/98‑1 (MQ=37)
cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG.CGGCGAACACCGATACCG.C.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaaaa > 2:3298710/1‑99 (MQ=2)
cGTCGCCCCCCCCGCGGGGGCGGGTATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTCCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg < 2:2250636/101‑1 (MQ=37)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGt < 1:2778662/101‑1 (MQ=255)
ccGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGt < 1:1816451/100‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTa > 1:3056867/1‑101 (MQ=255)
cttcccccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGGAACTGGTATg > 2:875290/4‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATgg > 2:1172760/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATgg > 1:2966343/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATgg > 2:1603454/1‑101 (MQ=255)
cccccccGGGGGGGGGGGGATCAAAACACCTGCTTGTAGTGGG.CGG.GCGGTCGGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATgg < 1:3873470/100‑1 (MQ=21)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCt < 2:3153209/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCt < 1:4199048/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTgg < 2:2499199/101‑1 (MQ=255)
ggggggcCGTGAATCGAAACATCTGGTTGTGGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgc < 2:1048267/99‑1 (MQ=37)
gcgGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgc > 1:1403156/1‑101 (MQ=255)
gcgGGGGCGTGGACCGAAACATCGGCGGGGAGTCGG.CGG.GCAGTTGGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgc < 2:4017738/101‑1 (MQ=37)
gggggCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGgcgc > 2:3200016/1‑101 (MQ=255)
ggggCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCa > 2:2084684/1‑101 (MQ=255)
gCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAAc > 1:2737661/1‑101 (MQ=255)
cGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACg > 2:3742661/1‑101 (MQ=255)
gggATCGAACCATCTGCACGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGa < 2:1913152/100‑1 (MQ=255)
gggtCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa > 1:2416128/4‑101 (MQ=255)
ggATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa < 1:3194024/101‑1 (MQ=255)
ggATCGAAACATCTGCAGGTGGTCGG.CGG.GCAGTGCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGaa < 2:1818926/101‑1 (MQ=255)
gATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAATGGTATCGGTCTGGCGCAAACGGaag > 2:3092418/1‑100 (MQ=255)
gAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCt < 2:2609382/101‑1 (MQ=255)
gAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCt > 1:2364363/1‑101 (MQ=255)
gAAACACCGGCAGGTAGGCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCt < 2:3901031/101‑1 (MQ=37)
aaCATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgt < 2:1270110/101‑1 (MQ=255)
aaCATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgt < 1:2043358/101‑1 (MQ=255)
cATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcg > 2:2236579/1‑101 (MQ=255)
aTCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgt > 1:3550556/1‑101 (MQ=255)
tCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgtc > 2:1643354/1‑101 (MQ=255)
tCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTgtcgtc > 2:3507926/1‑101 (MQ=255)
tCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTggcgtc > 1:919872/1‑101 (MQ=255)
cTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGtcgtcg < 1:4113891/101‑1 (MQ=255)
gCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCt > 2:1465308/1‑101 (MQ=255)
gCATGTAGCCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCt < 2:1876006/101‑1 (MQ=255)
aggTAGTCGG.GGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 1:979659/99‑1 (MQ=255)
aggTAGTCGG.GGG.GCAGTGCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcc < 1:1494179/99‑1 (MQ=255)
gTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTcccc > 1:179460/1‑101 (MQ=255)
tAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTccccc > 2:129530/1‑101 (MQ=255)
gTCGG.CGG.GCAGTCCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCcg < 2:4030918/101‑1 (MQ=255)
gcgg.cgg.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCcgc < 2:3620668/100‑1 (MQ=255)
cgg.cgg.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCcgcg > 2:736160/1‑101 (MQ=255)
gg.cgg.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCgg > 2:303445/1‑101 (MQ=255)
gg.cgg.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCgg > 1:336526/1‑101 (MQ=255)
g.cgg.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCggg > 1:3469124/1‑101 (MQ=255)
ggg.gCGGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCgggg < 1:1172854/100‑1 (MQ=255)
gg.gCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCggggg > 2:1402118/1‑101 (MQ=255)
gg.gCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCggggg < 1:4122783/101‑1 (MQ=255)
cAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGTTATTGATCTGGCGCAAACGGAAAGTCTGCCGTCGCTCCCCCCGCGGGGGCGt > 2:536582/1‑101 (MQ=255)
aGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTg > 1:816544/1‑101 (MQ=255)
aGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTg < 1:1015688/101‑1 (MQ=255)
|
TGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGG.CGG.GCAGTTCGA.GCCG.CAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTG > NC_014034/1395588‑1395786
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|