BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,395,804	T→C	5.4%	intergenic (+616/‑315)	RCAP_rcc01306 → / → RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,395,804	0	T→C	5.4%	16.2 0.0 ‑0.2	202	intergenic (+616/‑315)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
Reads supporting (aligned to +/- strand): new base (6/5): ref base (95/96): total (101/101)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.99e-01

Only 100 of 213 total aligned reads displayed.


TCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCT  >  NC_014034/1395704‑1395904


tCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGt                                                                                                         >  2:970944/1‑101 (MQ=255)


 ccccccGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTg                                                                                                        >  1:3013802/1‑101 (MQ=255)


  cccccGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGa                                                                                                       <  2:816463/101‑1 (MQ=255)


     ccGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGtt                                                                                                    >  1:3978081/1‑101 (MQ=255)


      cgcgGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTg                                                                                                   <  2:964791/101‑1 (MQ=255)


      cgcgGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTg                                                                                                   <  2:3055663/101‑1 (MQ=255)


       gcgGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGc                                                                                                  <  1:578812/101‑1 (MQ=255)


       gcgGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGc                                                                                                  >  1:2118968/1‑101 (MQ=255)


         gggggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCa                                                                                                <  1:1967890/101‑1 (MQ=255)


         gagggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAATTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCa                                                                                                <  1:187084/99‑1 (MQ=255)


          ggggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAg                                                                                               <  1:1430911/101‑1 (MQ=255)


           gggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCaag                                                                                              >  1:898502/1‑99 (MQ=255)


            ggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTg                                                                                             >  2:1230011/1‑101 (MQ=255)


            ggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTg                                                                                             >  2:2328922/1‑101 (MQ=255)


            ggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTg                                                                                             >  2:2973250/1‑101 (MQ=255)


            ggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTACG.GCGTGAGTTGCCAGTg                                                                                             <  1:2195379/101‑1 (MQ=255)


             gCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTGGCCAGTGa                                                                                            <  1:3414871/101‑1 (MQ=255)


              cGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGTTCGAAAC.CTGCG.GCGTGAGTTGCCAGGGAt                                                                                           >  1:1653899/1‑101 (MQ=255)


               gTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATa                                                                                          <  2:1613234/101‑1 (MQ=255)


                tGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAg                                                                                         <  1:2475855/101‑1 (MQ=255)


                  gATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.c                                                                                      >  1:2993949/1‑101 (MQ=255)


                   aTCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.g                                                                                    >  1:2725732/1‑101 (MQ=255)


                    tCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.Gc                                                                                   <  1:1892411/101‑1 (MQ=255)


                    tCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.Gc                                                                                   <  1:366117/101‑1 (MQ=255)


                     cGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCGCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.Gcc                                                                                  <  2:3114734/101‑1 (MQ=255)


                       aaaCTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGt                                                                                >  2:1083631/1‑101 (MQ=255)


                       aaaCTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGt                                                                                >  1:1717480/1‑101 (MQ=255)


                        gaCTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTg                                                                               >  2:1531239/2‑101 (MQ=255)


                          cTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGa                                                                             <  1:1757267/101‑1 (MQ=255)


                           tGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.c                                                                           >  1:3450447/1‑101 (MQ=255)


                           tGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.c                                                                           <  1:3200255/101‑1 (MQ=255)


                              tATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTc                                                                        <  2:890403/101‑1 (MQ=255)


                              tATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTc                                                                        <  1:2885532/101‑1 (MQ=255)


                              tATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTc                                                                        <  2:3468872/101‑1 (MQ=255)


                              tATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTc                                                                        <  2:2737455/101‑1 (MQ=255)


                               aTGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCg                                                                       >  1:1592404/1‑101 (MQ=255)


                               aTGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCg                                                                       <  2:275254/101‑1 (MQ=255)


                                  gATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTc                                                                    <  1:3742915/101‑1 (MQ=255)


                                   aTCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcc                                                                   >  1:1306466/1‑101 (MQ=255)


                                      tGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTccccc                                                                <  1:616763/101‑1 (MQ=255)


                                      tGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTccccc                                                                >  2:3401966/1‑101 (MQ=255)


                                       ggCGCAAACGGAAAGTCTGTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcccccc                                                               <  1:3389196/101‑1 (MQ=255)


                                           cAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgg                                                           >  2:3767055/1‑101 (MQ=255)


                                           cAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgg                                                           >  1:2032776/1‑101 (MQ=255)


                                           cAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgg                                                           >  2:2193587/1‑101 (MQ=255)


                                            aaaCGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCggg                                                          >  1:4081920/1‑101 (MQ=255)


                                             aaCGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgggg                                                         <  1:2236738/101‑1 (MQ=255)


                                               cGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGc                                                       >  1:358168/1‑101 (MQ=255)


                                               cGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGc                                                       <  1:2329090/101‑1 (MQ=255)


                                               cGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGc                                                       >  1:2588767/1‑101 (MQ=255)


                                                ggAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCg                                                      <  2:1783277/101‑1 (MQ=255)


                                                ggAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCg                                                      >  1:3215379/1‑101 (MQ=255)


                                                 gAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCgg                                                     >  2:691232/1‑100 (MQ=255)


                                                  ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt                                                     >  2:3633167/10‑101 (MQ=0)


                                                  ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt                                                     >  2:1325824/10‑101 (MQ=0)


                                                  ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt                                                     >  2:1918783/10‑101 (MQ=0)


                                                  ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt                                                     >  1:1044080/10‑101 (MQ=0)


                                                  ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt                                                     <  1:1912590/92‑1 (MQ=0)


                                                   gacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTg                                                    <  2:2139912/93‑1 (MQ=0)


                                                    aGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCCTGGa                                                  >  1:2335903/1‑101 (MQ=255)


                                                     cccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGCGGCGTggc                                                  >  2:2853126/7‑100 (MQ=0)


                                                         gtcgtcGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                             >  1:3900193/1‑101 (MQ=255)


                                                         gtcgtcGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                             <  1:3329074/101‑1 (MQ=255)


                                                         ggcgtcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                             <  1:1159112/99‑1 (MQ=255)


                                                          tcgtcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                            >  2:2453383/1‑101 (MQ=255)


                                                           cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                           <  2:772701/101‑1 (MQ=255)


                                                            gtcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt                                          <  1:3429159/101‑1 (MQ=255)


                                                             tcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg                                         >  1:2397009/1‑101 (MQ=255)


                                                               gCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgcg                                       <  1:3508179/101‑1 (MQ=255)


                                                                  ccccccGCGGGGGCGTGGATCGAAACAATGCG.GCGCGA...GCCTATGGCTGA.CGGACCCGCC.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgcgtgcg                                   <  1:3571313/101‑5 (MQ=2)


                                                                   cccccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGC.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGcgccgc                                   <  1:722057/101‑1 (MQ=255)


                                                                     cccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCt                                 >  2:1256389/1‑101 (MQ=255)


                                                                      ccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTa                                >  1:928397/1‑101 (MQ=255)


                                                                      ccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTa                                >  1:2000319/1‑101 (MQ=255)


                                                                       cttccgatcttGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTAt                               <  1:3092116/91‑1 (MQ=255)


                                                                         cgGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCg                             >  1:1239995/1‑101 (MQ=255)


                                                                            gggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCAt                          >  2:479063/1‑101 (MQ=255)


                                                                            gggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCAt                          >  2:3288612/1‑101 (MQ=255)


                                                                             ggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATc                         >  1:1457696/1‑101 (MQ=255)


                                                                             ggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATc                         <  2:2549645/101‑1 (MQ=255)


                                                                              gCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATcc                        >  2:3153011/1‑101 (MQ=255)


                                                                                gTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCgg                      >  2:2396631/1‑101 (MQ=255)


                                                                                gTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCgg                      >  2:92040/1‑101 (MQ=255)


                                                                                gTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCgg                      <  1:1643469/101‑1 (MQ=255)


                                                                                 tGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTAtagatcggaag                     >  2:3091886/1‑91 (MQ=255)


                                                                                 tGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGt                     >  1:1266308/1‑101 (MQ=255)


                                                                                 tGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGt                     >  1:510830/1‑101 (MQ=255)


                                                                                     tCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAg                 <  2:2415952/101‑1 (MQ=255)


                                                                                        aaaC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAgcgc              >  1:1354526/1‑101 (MQ=255)


                                                                                         aaC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGcgcc             >  2:403740/1‑101 (MQ=255)


                                                                                              tGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCgcgc         <  2:2993727/101‑1 (MQ=255)


                                                                                              tGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCgcgc         <  2:1645035/101‑1 (MQ=255)


                                                                                               gcg.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCa        <  2:1406628/101‑1 (MQ=255)


                                                                                               gcg.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCa        <  2:2700676/101‑1 (MQ=255)


                                                                                                cg.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAg       <  1:536646/101‑1 (MQ=255)


                                                                                                   gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTc     <  2:3977821/101‑1 (MQ=255)


                                                                                                   gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGGCGCTCCCCCCGCGGGGGCGTGAATCGAAACTGCGCCGCCTTTCGCATCCGGTCGAGCGCCGCGCAGTc     <  2:3848802/101‑1 (MQ=255)


                                                                                                    cgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCg    >  1:1466493/1‑101 (MQ=255)


                                                                                                     gTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCAAGcgccttagatcgga   >  1:2539662/1‑91 (MQ=37)


                                                                                                      tGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCt  <  1:1531343/101‑1 (MQ=255)


TCCCCCCGCGGGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCT  >  NC_014034/1395704‑1395904

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 40 ≤


ATCG