| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,828 | G→C | 5.3% | intergenic (+640/‑291) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,828 | 0 | G→C | 5.3% | 16.5 ‑0.3 ‑1.0 | 188 | intergenic (+640/‑291) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (6/4): ref base (91/87): total (97/91) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.48e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.90e-02 | ||||||||||
Only 100 of 196 total aligned reads displayed.
AACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGA > NC_014034/1395728‑1395927
|
gaCTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTg > 2:1531239/2‑101 (MQ=255)
cTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGa > 2:3422542/1‑101 (MQ=255)
cTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGa < 1:22412/101‑1 (MQ=255)
cTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGa < 1:1757267/101‑1 (MQ=255)
tGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.c < 2:2741296/101‑1 (MQ=255)
tATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTc < 2:890403/101‑1 (MQ=255)
aTGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCg > 1:1592404/1‑101 (MQ=255)
aTGGATCTGGCGCAAACGGAAAGGCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGCGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCg > 2:298696/1‑101 (MQ=255)
tGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGc < 2:965906/101‑1 (MQ=255)
ggATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCt < 1:2084822/101‑1 (MQ=255)
gATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTc < 1:303490/101‑1 (MQ=255)
aTCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcc > 2:1937197/1‑101 (MQ=255)
cTGGCGCAAACGGAAAGTCTGTCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcccc < 1:1424778/101‑1 (MQ=255)
ggCGCAAACGGAAAGTCTGTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcccccc < 1:3389196/101‑1 (MQ=255)
gcAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCcgcg > 1:3468910/1‑101 (MQ=255)
gcAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCcgcg > 2:1799412/1‑101 (MQ=255)
cAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgg < 1:599329/101‑1 (MQ=255)
cAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgg > 1:2032776/1‑101 (MQ=255)
cAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgg > 2:3023044/1‑101 (MQ=255)
cAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgg > 2:3767055/1‑101 (MQ=255)
aaaCGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCggg > 1:4081920/1‑101 (MQ=255)
cGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGc < 1:2329090/101‑1 (MQ=255)
cGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGc > 1:2588767/1‑101 (MQ=255)
gAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCgg > 2:691232/1‑100 (MQ=255)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt > 2:1325824/10‑101 (MQ=0)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt > 2:3633167/10‑101 (MQ=0)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt > 1:1044080/10‑101 (MQ=0)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt < 1:1912590/92‑1 (MQ=0)
aaaGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTg < 2:919787/101‑1 (MQ=255)
gacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTg < 1:3922852/93‑1 (MQ=0)
aaGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTgg < 1:298741/101‑1 (MQ=255)
aaGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTgg > 2:2266842/1‑101 (MQ=255)
aGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGa > 1:1807410/1‑101 (MQ=255)
gTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:3853416/1‑101 (MQ=255)
tCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATc > 1:3213383/1‑101 (MQ=255)
cTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:3122353/1‑101 (MQ=255)
tGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:7077/101‑1 (MQ=255)
tGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:1345908/101‑1 (MQ=255)
gtcgtcGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:3329074/101‑1 (MQ=255)
ggcgtcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:1159112/99‑1 (MQ=255)
tcgtcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:2453383/1‑101 (MQ=255)
cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:14730/101‑1 (MQ=255)
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt < 1:3429159/101‑1 (MQ=255)
tcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg > 1:3410438/1‑101 (MQ=255)
tcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg > 1:2397009/1‑101 (MQ=255)
cgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgc > 2:4061945/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACAATGCG.GCGCGA...GCCTATGGCTGA.CGGACCCGCC.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgcgtgcg < 1:3571313/101‑5 (MQ=2)
cccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCt > 2:1256389/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTCAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCt < 2:1107604/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTa > 1:2000319/1‑101 (MQ=255)
ccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTa > 1:928397/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCg > 1:1239995/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCg > 2:4024202/1‑101 (MQ=255)
ggggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGcc > 1:2700882/1‑100 (MQ=255)
gggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCAt > 1:2542545/1‑101 (MQ=255)
gggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCAt > 2:479063/1‑101 (MQ=255)
gggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCAt > 2:3288612/1‑101 (MQ=255)
ggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATc > 1:1457696/1‑101 (MQ=255)
ggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATc < 2:2549645/101‑1 (MQ=255)
gTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCgg > 2:2396631/1‑101 (MQ=255)
gTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCgg < 1:1643469/101‑1 (MQ=255)
tGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTAtagatcggaag > 2:3091886/1‑91 (MQ=255)
tGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGt > 1:510830/1‑101 (MQ=255)
tGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGt > 1:1266308/1‑101 (MQ=255)
aTCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGa > 2:2725884/1‑101 (MQ=255)
tCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAg < 2:2415952/101‑1 (MQ=255)
gAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAgcg > 2:1632337/1‑101 (MQ=255)
aaaC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAgcgc > 2:1770907/1‑101 (MQ=255)
aaC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGcgcc < 2:2364187/101‑1 (MQ=255)
aC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGcgccg < 2:2612379/101‑1 (MQ=255)
gcg.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCa < 2:1406628/101‑1 (MQ=255)
cg.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAg < 1:536646/101‑1 (MQ=255)
cg.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAg < 1:2204414/101‑1 (MQ=255)
g.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGt > 2:927227/1‑101 (MQ=255)
gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGGCGCTCCCCCCGCGGGGGCGTGAATCGAAACTGCGCCGCCTTTCGCATCCGGTCGAGCGCCGCGCAGTc < 2:3848802/101‑1 (MQ=255)
cgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCg > 1:1466493/1‑101 (MQ=255)
gTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGc < 1:3251076/101‑1 (MQ=255)
tGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGcc > 2:2183684/1‑100 (MQ=255)
tGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCt < 1:1531343/101‑1 (MQ=255)
gAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTc < 2:2966121/101‑1 (MQ=255)
aGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTcc < 1:896238/101‑1 (MQ=255)
ttGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTcccc > 1:1105340/1‑101 (MQ=255)
ttGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTcccc > 2:560565/1‑101 (MQ=255)
ttGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGATcccc > 2:1357098/1‑101 (MQ=255)
gtGCCAGTGATAGA.C.GCCGTGGG.CGTCGCTGCCCCCGCGGGCGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTcccc < 2:323376/100‑1 (MQ=255)
gCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTcccccc < 2:631459/101‑1 (MQ=255)
cAGTGATAGA.C.GCCGGGGA.CGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCcgc < 1:3174793/101‑1 (MQ=255)
aGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCcgcg < 1:1937323/101‑1 (MQ=255)
gTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCgg > 2:3587048/1‑101 (MQ=255)
tAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGc > 1:3736246/1‑101 (MQ=255)
tAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGc > 2:2841934/1‑101 (MQ=255)
aGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGCg > 2:39093/1‑101 (MQ=255)
aGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGCg > 2:77838/1‑101 (MQ=255)
a.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGCGTg < 2:1807291/101‑1 (MQ=255)
a.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGCGTg > 1:2334848/1‑101 (MQ=255)
ccGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:736236/101‑1 (MQ=255)
ccGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:2788548/101‑1 (MQ=255)
cGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:3001493/101‑1 (MQ=255)
gTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:2813890/1‑101 (MQ=255)
gTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGACGCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:3631782/1‑101 (MQ=255)
|
AACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGA > NC_014034/1395728‑1395927
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|