| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,613,975 | T→C | 3.8% | intergenic (+138/+89) | rnd2 → / ← uvrD | ribonuclease D/DNA helicase II |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,613,975 | 0 | T→C | 3.8% | 2.1 ‑0.6 ‑0.0 | 106 | intergenic (+138/+89) | rnd2/uvrD | ribonuclease D/DNA helicase II |
| Reads supporting (aligned to +/- strand): new base (0/4): ref base (30/72): total (30/76) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.75e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.64e-01 | ||||||||||
Only 100 of 132 total aligned reads displayed.
GCATTTCCCCCTGCCCGCCGAGGGCCCAAA.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCA > NC_014034/1613877‑1614074
|
gcttcccccccCGCCCGCCGAGGCCCAAAA.GC.CCCTCGCCCGGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTttg < 2:3610209/95‑1 (MQ=17)
atcccccccTGCCCGCGGAGGCCCCAAA.GG.CCCTGGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTttg.tt < 1:2772937/97‑1 (MQ=17)
ttccccccCGCCGGGCGGGGGCCAAAA.GA.CCCGGGGCGTGCGGCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTttg.ttg < 1:1126384/98‑1 (MQ=14)
ccTGCCCGCCGAGGGCCCAAA.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGCGTCGCG.CCGCCCGGGGGGGGGGCCGGGCCTTTT.TTGGGCtg > 1:4130850/1‑100 (MQ=2)
ccccGCCGGGCGCCCAAA.GC.CCCCGGCCCTGCCCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTgggg < 1:3279009/100‑1 (MQ=14)
cccGCCGGGGGCCAAAG.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.a < 1:1157078/101‑1 (MQ=255)
gccgGGGCCCCAAG.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAAc < 1:3532177/101‑1 (MQ=255)
ccgGGGGCCAAAG.GC.CCCGCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACg < 2:3923175/101‑1 (MQ=17)
ccgAGGGCCCAAA.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGGGTCGCGCCCC.CCGGGGGGGGGGGGGGGCCCTTG.TTG.GCTTggggggaag > 1:2658442/1‑96 (MQ=2)
ccgAGGGCCCAAA.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGCGTCGCG.CCGCCCGGGGGGGGGGGCGGGCCTTT..TTGGGCTTtggggggag > 1:1780573/1‑96 (MQ=2)
gggCCCAAG.GG.CCCCGGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCt < 1:3376818/101‑1 (MQ=255)
gggCCCAAA.GGCCCCTCGCCCGGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTc < 2:2899423/101‑1 (MQ=17)
gggCCAAAA.GG.CCCTGGGCCTGCCCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCt < 1:2024605/101‑1 (MQ=255)
gccccAAA.GG.CCCCCGCCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCtt < 2:3197684/99‑1 (MQ=255)
gCCCAAAGGG.CCCTGGGCCTGCCCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCtt < 2:3614989/101‑1 (MQ=17)
gCCCAAA.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGCACTCGCC.CCG.CCCGGGGGGGGGGGCGGCCCTTG.TTTCGCTCGGGG.GGACgggcgtt > 2:578258/1‑96 (MQ=2)
cAAA.GG.CCCTCGCCCTGCCCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCcg < 2:1170347/101‑1 (MQ=255)
aa.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGGCTTCGCG.CCGCCCGGGGGGGGGGCCGGGCCTTTT.TTG.GCCTGGGG.GAAAGGGCTTGCctcg > 2:1256094/1‑101 (MQ=2)
aaggccccCCGGCCTCCCCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCcgc < 2:1660556/96‑1 (MQ=17)
aagcccccCCGCCCGGCCCCCGCCCCGCCATCGGCGGGCGCAGTCGCG.CCG.CCGGGGCGGAGCGCAGGCCTCTG.TTGTGCTTGGGGCAGGCGGTCGTGCcg < 2:1078438/96‑1 (MQ=17)
ccccgcccggcgcCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGt < 2:25545/92‑1 (MQ=255)
cgcccTGCCCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGc < 1:3150677/98‑1 (MQ=255)
ggCCTGCGCCCGCCCCGCCATCGGCGGGTGGGTTCGCG.CGG.CCGGGGCGGGGGGCCGGGCGTTGTTTTCGTTTTGGG..GAGGGTCTTGTCGCGGGTGTTgtg > 1:2715634/1‑99 (MQ=2)
ggCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCg < 1:194023/101‑1 (MQ=255)
ggCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCg < 1:3475220/101‑1 (MQ=255)
ccggcccccgccccgcCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.At < 1:1283370/95‑1 (MQ=255)
ccTGCGCCCGCCCCGCCATCGGCGGGGGGATTCGCG.CCG.CCCGGGGGGGGGGCAGGGCCTTT.TTTCGCTTGGGG.GGAAGGGCTTGCCGCGGCCGGTGCggg > 1:2644888/1‑99 (MQ=9)
ccTGCGCCCGCCCCGCCATCGGCGGGGGCCCTCGCG.CCC.CCCCGGGGGGGCGCGGGCCCTTT.TTTTGCTTTGGG.GGAGGGGGTTGCCGCGGCGGtggtgcg > 1:881233/1‑95 (MQ=2)
tGCGCCCTCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.gc < 2:3404137/101‑1 (MQ=255)
cccccgccccgcCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.gcgg < 1:2524393/99‑1 (MQ=255)
cccgccccgcCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.gcgggc < 2:1153094/101‑1 (MQ=255)
cgccccgccATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.gcgggcgg < 2:4131134/101‑1 (MQ=255)
ccccgccATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCgggg < 1:1701793/101‑1 (MQ=255)
cATGGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGc < 1:2872640/101‑1 (MQ=255)
ggcgggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGGAGTg > 2:1477158/1‑101 (MQ=255)
ggcgggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTg < 2:136521/101‑1 (MQ=255)
gcgggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGc < 1:3236022/101‑1 (MQ=255)
cgggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGcc > 2:1148540/1‑101 (MQ=255)
gggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGccc < 1:3937747/101‑1 (MQ=255)
ggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCt > 2:3918595/1‑101 (MQ=255)
gcgcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCtt < 2:2277145/101‑1 (MQ=255)
gcATTGGCG.CCG.CCGGGGCGGGACGCAGGTCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc < 2:1483956/101‑1 (MQ=255)
gcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc > 1:2378943/1‑101 (MQ=255)
gcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc > 2:2142513/1‑101 (MQ=255)
gcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc > 2:3021192/1‑101 (MQ=255)
gcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc < 1:3606783/101‑1 (MQ=255)
gcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc < 1:365695/101‑1 (MQ=255)
cATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCt < 2:1953881/101‑1 (MQ=255)
cATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCt < 1:495670/101‑1 (MQ=255)
cATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCt < 2:4072670/101‑1 (MQ=255)
cATTCGAG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGCGG.AAACGGTCTTCCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCt < 2:495044/101‑1 (MQ=255)
aTTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAGGGCAGTGCCCTTCCTg < 2:1067604/101‑1 (MQ=255)
aTTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTg > 2:636214/1‑101 (MQ=255)
aTTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTg < 2:536324/101‑1 (MQ=255)
aTTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTg < 1:3435426/101‑1 (MQ=255)
aTTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTg < 1:148577/101‑1 (MQ=255)
aTTCGCG.CCG.CCGGGGCGGGACGCAGGCATTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTg < 2:1226955/101‑1 (MQ=255)
tCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGAt < 1:3727770/101‑1 (MQ=255)
cgcg.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATc < 2:422964/101‑1 (MQ=255)
cgcg.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATc < 1:3918855/101‑1 (MQ=255)
gcgcggcgggggggGGGGACGAAGGCCTCTG.TCGTGCTTGGGG.AAACGGTCTTGGCACAGGTGATGCGCCA.GCGGGCGGGGAAAGGCAGTGCCTTTCCCGa < 2:2936998/91‑1 (MQ=21)
gcg.cCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATcc > 1:924237/1‑101 (MQ=255)
cccgcggggggggCGGGCCAAAGGCCTCTG.TCGTGCTTGGGG.AAACGGTCTTGGCACAGGTGATGCG.CCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGAt < 2:2467004/92‑1 (MQ=25)
g.ccg.ccGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGc > 1:1870179/1‑101 (MQ=255)
cgcggggggggCGGGCCAAAGGCCTCTG.TCGTGCTTGGGG.AAACGGTCTTGGCACAGGTGATGCGCCA.GCGGGCGGGGAAAGGCAGTGCCTTTCCCGATcc < 2:3571034/94‑1 (MQ=25)
cg.ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGccc > 2:3031439/1‑101 (MQ=255)
cg.ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGccc > 1:2551912/1‑101 (MQ=255)
cg.ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGccc < 1:2362563/101‑1 (MQ=255)
cg.ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGccc < 2:2715428/101‑1 (MQ=255)
g.ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCg > 1:3870495/1‑101 (MQ=255)
g.ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCg < 1:2878381/101‑1 (MQ=255)
cggcgGGGCGGGACGCAGGGCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGccc < 1:3401838/98‑1 (MQ=255)
ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGa > 1:876499/1‑101 (MQ=255)
ggggCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAAc < 2:598086/101‑1 (MQ=255)
ggggCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAAc > 2:3285994/1‑101 (MQ=255)
gggCGGGACGCAGGTCTTTG.TTGCGCTGGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAAcc < 2:4235511/101‑1 (MQ=255)
gggCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAAcc < 2:1780454/101‑1 (MQ=255)
ggCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCg > 1:1682719/1‑101 (MQ=255)
cGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCggg < 1:1250866/101‑1 (MQ=255)
cGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCggg > 2:3539298/1‑101 (MQ=255)
gggACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCgggg > 2:4213828/1‑101 (MQ=255)
ggACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGc < 2:762325/101‑1 (MQ=255)
cGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCa < 1:809052/101‑1 (MQ=255)
cGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCa < 2:3323981/101‑1 (MQ=255)
cGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGAG.AT.GCGGGCGGGGTAAGGCAGTGTCCCTCCTGATTCGCCCTAACCTGGGCTCa > 2:705465/1‑101 (MQ=21)
gccggCGTTTG.TTGCGCTTGAGA.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCGGCCCGAACCGGGGCTCAg < 2:3573578/98‑1 (MQ=18)
gCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAg > 1:2884441/1‑101 (MQ=255)
gCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAg > 2:3374061/1‑101 (MQ=255)
cAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGa > 2:1481005/1‑101 (MQ=255)
cAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACAGGGGCTCAGa > 2:3592363/1‑101 (MQ=255)
aGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGaa > 1:569917/1‑101 (MQ=255)
aGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGaa > 1:2196991/1‑101 (MQ=255)
aGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGaa > 2:1732131/1‑101 (MQ=255)
ggCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAAc > 1:2921339/1‑101 (MQ=255)
gCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACg < 1:3567847/101‑1 (MQ=255)
ccTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGACCCGGGGCTCAGAACgg > 1:1909566/1‑101 (MQ=255)
ccTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACgg < 2:3918938/101‑1 (MQ=255)
ccTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAACGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACgg < 2:2163169/101‑1 (MQ=255)
cTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGc < 2:1168388/101‑1 (MQ=255)
tttG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCa > 1:1500723/1‑101 (MQ=255)
|
GCATTTCCCCCTGCCCGCCGAGGGCCCAAA.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGG.AAACGGTCTTGCCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCA > NC_014034/1613877‑1614074
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|