| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,333 | G→C | 3.4% | intergenic (‑129/‑176) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,333 | 0 | G→C | 3.4% | 6.0 0.0 0.0 | 187 | intergenic (‑129/‑176) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (4/3): ref base (93/86): total (97/90) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 205 total aligned reads displayed.
TGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.CCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCG > NC_014034/2249234‑2249432
|
tGCACAGATACCGCAGCTTGGGCACCCGGGGCATGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...gggg..gg < 1:3660888/101‑1 (MQ=255)
caGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCttt > 2:2944183/1‑101 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTc < 2:3572785/101‑1 (MQ=255)
aGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTc < 2:2682658/101‑1 (MQ=255)
gATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCa < 2:3723645/101‑1 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt < 2:2541887/101‑1 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt > 2:484617/1‑101 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt < 2:3361288/101‑1 (MQ=255)
aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATCAA...GGGG..GGCTTTCATCt > 1:289967/1‑101 (MQ=255)
ccGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCtt < 1:2985079/101‑1 (MQ=255)
gCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGc < 2:34017/101‑1 (MQ=255)
gCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAC...GGGG..GGCTTTCATCTTGCCGa < 1:2398280/101‑1 (MQ=255)
gCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGa > 2:329499/1‑101 (MQ=255)
cTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaa < 1:2730742/101‑1 (MQ=255)
ttGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaa < 2:641662/101‑1 (MQ=255)
tGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaaa > 1:1777245/1‑101 (MQ=255)
gggGACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat < 1:3101496/101‑1 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat < 1:1160251/101‑1 (MQ=255)
gggCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat < 1:2869083/101‑1 (MQ=255)
cACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATc < 2:3329254/101‑1 (MQ=255)
cACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATc < 1:1510934/101‑1 (MQ=255)
cACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATc < 1:137626/101‑1 (MQ=255)
cccGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATccc > 1:3493532/1‑101 (MQ=255)
cccGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATccc < 2:1371457/101‑1 (MQ=255)
ccGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCg < 1:472521/101‑1 (MQ=255)
ccGGGGCAAGAAGGGGGCCCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCg < 2:1997830/101‑1 (MQ=255)
cGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgg > 2:2229856/1‑101 (MQ=255)
gCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgggggg < 2:1527196/101‑1 (MQ=255)
cAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggggggg > 1:24659/1‑100 (MQ=255)
cAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGt > 1:602512/1‑101 (MQ=255)
aagaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg < 2:3511322/101‑1 (MQ=255)
gaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaa < 2:911974/101‑1 (MQ=255)
agGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.Tg > 2:1251327/1‑101 (MQ=255)
agGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.Tg < 1:2616160/101‑1 (MQ=255)
gggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc.g > 2:208618/1‑101 (MQ=255)
gggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc.g < 1:2264758/101‑1 (MQ=255)
gggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc.g > 1:2206728/1‑101 (MQ=255)
ggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc.gc < 2:1721042/101‑1 (MQ=255)
gCTCTGCCCCCGTCCCTTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCa < 2:1105257/101‑1 (MQ=255)
ctctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..g < 1:106933/101‑1 (MQ=255)
ctctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..g < 1:1238753/101‑1 (MQ=255)
ctgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..Gcc < 1:1853884/97‑1 (MQ=255)
tgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCa > 1:3225845/4‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCag > 1:3162421/3‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGC.GCA..GCCag > 1:2243123/3‑101 (MQ=255)
cccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAg.g > 1:4129767/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAg.ggg > 2:3683041/1‑101 (MQ=255)
ccgatctcGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGc < 2:425147/94‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGc > 2:3872364/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAg < 2:24645/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAg > 1:84139/1‑101 (MQ=255)
cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC.GAA..GCCAGAg.gggg > 2:2990221/8‑101 (MQ=18)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAg.c > 2:4053323/1‑101 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAg.c < 1:1001720/101‑1 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAg.c > 2:1123088/1‑101 (MQ=255)
gcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC.GAA..GCCAGAg.ggggg > 1:144992/7‑101 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAg.cg.c > 1:3537406/1‑101 (MQ=255)
cGGGACT.CCTCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.ccc < 2:459552/101‑1 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.ccc > 1:1918090/1‑101 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.ccc > 1:995632/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.cccc > 1:1616232/1‑101 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.TGGGGCAG.CG.cccccct < 2:4129505/101‑3 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.cccccctt > 1:3144277/1‑98 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.ccccccttc > 1:1710117/1‑97 (MQ=255)
ccccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.ccccccttc < 2:2892488/100‑5 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.ccccccttcg < 2:3959378/101‑6 (MQ=255)
cccccGGGATATTTGAGGCAAGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.ccccccttcg < 2:450745/101‑6 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTcgc < 1:811842/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTcgc < 2:1633285/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTcgc > 1:2354331/1‑101 (MQ=255)
cccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTcgcg < 2:3190971/101‑1 (MQ=255)
cccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAAGATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTcgcg > 1:3579042/1‑101 (MQ=255)
ccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCgcgg > 1:82437/1‑101 (MQ=255)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGAGAAT.TGGC.CAAAGGCCAAGA.GGGGGCAG.CG.CCCCCtgacc > 2:1879142/1‑97 (MQ=2)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGC.CAAAGGCCAAGA.GGGGGCAG.CG.CCCCCtgccc > 2:1663196/1‑97 (MQ=0)
cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCgcggg > 1:636164/1‑101 (MQ=255)
cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCgcggg > 1:433227/1‑101 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCGGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCgcgggc < 2:2916758/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCgcgggc < 2:410638/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCgcgggc > 2:3783320/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCgcgtgcg > 1:1361193/1‑101 (MQ=255)
gaatatTGGAAGAAAGATGAG...GGGG..TTTTTTCCTCGTGCAAAAAATCTCCGGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAGCCC.CCCCCTTCgcgggcg < 1:762483/99‑1 (MQ=255)
tatTTGCGGAAAGAGGAA...GGGGCATGTTTTCATCTTGCCCAAAATATCCC.GGGGGTGAATTGGCAAAA..GGCAAAGAGGGGGCAG.CG.CCCCCtgccccgccg < 2:3139117/101‑10 (MQ=9)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGcc > 2:1689121/1‑101 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCcg > 1:3698587/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..GTCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAc < 2:1972989/101‑1 (MQ=255)
ggCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAcgc > 1:910587/1‑101 (MQ=255)
ggCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAcgc > 2:370932/1‑101 (MQ=255)
gCAAGGTGGA...GGGG..GGCTCTCATCGTGCCGAAAATGCCCCGGGGGGTGAA.TGGC.GCA..GCCAGGG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAcgcg < 1:1681655/101‑1 (MQ=25)
cAAGATGAA...GGGG..GGCTTTCATCTTGCCGAGAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAcgcgc > 1:3765924/1‑101 (MQ=255)
aaGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGAcgcgcg > 2:1837501/1‑101 (MQ=255)
aGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACgcgcgc > 2:1588134/1‑101 (MQ=255)
aGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACgcgcgc > 1:4232831/1‑101 (MQ=255)
aTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGcgccg > 2:3618452/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:2262820/101‑1 (MQ=255)
gggg..ggTTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 2:899651/101‑1 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 2:1269296/1‑101 (MQ=255)
ggg..ggCTTTCATCTTGCCGAAAATATCCGGGGGGGTGAA.TGGC.TCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg < 1:382674/101‑1 (MQ=37)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCCACAg > 2:1053412/1‑101 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc > 2:2568943/1‑101 (MQ=255)
|
TGCACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGC.GCA..GCCAGAG.GGGGGCAG.CG.CCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCG > NC_014034/2249234‑2249432
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|