Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 2,494,003 | A→G | 7.2% | intergenic (+51/‑191) | RCAP_rcc02319 → / → RCAP_rcc02320 | hypothetical protein/hypothetical protein |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 2,494,003 | 0 | A→G | 7.2% | 17.5 ‑1.1 ‑0.0 | 139 | intergenic (+51/‑191) | RCAP_rcc02319/RCAP_rcc02320 | hypothetical protein/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (6/4): ref base (52/77): total (58/81) | ||||||||||
Fisher's exact test strand distribution p-value = 3.20e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.81e-01 |
Only 100 of 165 total aligned reads displayed.
GCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAA..GGGG.GGG.CGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.AGCAGAAGGGGGGCAAGCG.CCCCCTGCCCCGGCGGTCCGTG > NC_014034/2493904‑2494102
|
gcgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgca < 1:2111405/101‑1 (MQ=25)
cgTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcag < 1:3663506/101‑1 (MQ=25)
gTCTGGCCAAGCAGCGCGGCGGGCGCGCGGGGCGACAGCCTGAGTAA..GGGGTGGG.CGATGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcagc < 2:2670810/101‑1 (MQ=17)
tCTTGCCCAGCGCCGCGGCGGGCGCGCGGCCCGACAGGCCGAGTAA..GGGG.GGGTCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcagca < 2:4078883/101‑1 (MQ=21)
tCTGGCCCAGCGGCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.GGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGGTATTTgccgca > 1:2298543/1‑101 (MQ=21)
tCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcagca > 2:87518/1‑101 (MQ=25)
tCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTgcagca < 1:3974864/101‑1 (MQ=25)
tGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAg < 1:2475969/101‑1 (MQ=21)
tGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAg < 1:1563538/101‑1 (MQ=21)
ggCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCCAGCGGACTCCCCCCGGGATATTTGCAGCAAGa > 1:1784659/1‑101 (MQ=21)
ggCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGGTATTTTCAGCAAGa > 1:3680077/1‑101 (MQ=21)
cccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATg < 2:573109/101‑1 (MQ=21)
cccAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATg < 2:4193359/101‑1 (MQ=21)
cAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGaa < 1:450733/101‑1 (MQ=21)
cAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACGCCCCCCGGGATATTTGCACCAAGATGaa > 2:547352/1‑101 (MQ=18)
gcgcCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAc < 2:3840071/101‑1 (MQ=21)
gccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg < 2:2745107/101‑1 (MQ=21)
gccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg > 2:2630897/1‑101 (MQ=21)
gccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg < 2:2226720/101‑1 (MQ=21)
ccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCgg < 1:93742/101‑1 (MQ=21)
cgcgGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGa < 1:3543301/101‑1 (MQ=21)
ggcgggcgCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.GGCTGCCCCCCGTCCGCCAGCGGGCTCCCCCCGGGATATTTTCAGCAAGATGAAACCGGATGc > 2:2461382/1‑101 (MQ=18)
ggcgggcgCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGc < 1:2661231/101‑1 (MQ=21)
cgggcgCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCt > 2:1314684/1‑101 (MQ=21)
gggcgCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCCGGCTCCCCCCGGGATATTTGCAGCAAGAGGAAACCGGATGCCtt > 2:1852319/1‑101 (MQ=21)
ggcgCGCGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCttt < 2:3798128/101‑1 (MQ=21)
gcgcgcGGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc > 1:2611616/1‑101 (MQ=21)
gcgcgcGGCACGACAGGCCGAGGAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc < 2:1972186/101‑1 (MQ=18)
ggcgcgGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa < 2:1565830/100‑1 (MQ=18)
cgcgcgGCACGACAGGCCGAGTAAGGGGGG.GGG.CGCTGCCCCCCGCCCGCAAGCGGACTCCCCCCGGGAATTTTGCAGCAAAATGAAACCGGAGGCCTTTc > 1:1059554/1‑101 (MQ=18)
cgcgcgGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa < 1:3896555/101‑1 (MQ=21)
cgcgcgGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa < 1:337161/101‑1 (MQ=21)
cccgcgGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa < 1:1388558/99‑1 (MQ=18)
gcgcgGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGACTTTCAt > 2:734027/1‑101 (MQ=18)
gcgGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCt > 1:3138380/1‑101 (MQ=21)
gcgGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCt < 2:1549294/101‑1 (MQ=21)
cgGCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt < 1:134877/101‑1 (MQ=21)
gCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGc < 1:3274269/101‑1 (MQ=21)
gCACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGc > 2:1165122/1‑101 (MQ=21)
cACGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGcc > 1:1014986/1‑101 (MQ=21)
aCGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGccc < 2:2354520/101‑1 (MQ=21)
cGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCg > 1:1888872/1‑101 (MQ=21)
cGACAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGAGATTTGCAGCAAGATGAAACCGGACGCCTTTCATCTTGCCCg > 1:1524658/1‑101 (MQ=18)
cAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGaaa < 2:3183986/101‑1 (MQ=21)
cAGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCCGGGCATTTGCAGAAAGATGAAAACGGATGCCTTTTATCTTGTCCGaca > 1:833567/1‑99 (MQ=17)
aGGCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAat < 1:2461566/101‑1 (MQ=21)
ggCCGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata < 1:3201927/101‑1 (MQ=21)
cGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc < 1:3496873/101‑1 (MQ=21)
cGAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc > 1:1615732/1‑101 (MQ=18)
gAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc < 1:2594615/101‑1 (MQ=18)
gAGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc < 1:275202/101‑1 (MQ=18)
aGTAAG.GGGG.GGG.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCg < 1:1137456/101‑1 (MQ=18)
aggaaggggg.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCg < 2:177793/95‑1 (MQ=18)
gtaaggggg.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgg < 1:41580/96‑1 (MQ=255)
taaggggg.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGAGATTTGCAGCACGATGAAACCGGATGCCTTTCATATTGCCCGCAATATCCCcgg > 2:2879137/5‑101 (MQ=18)
aaggggg.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggg < 1:2488527/98‑1 (MQ=255)
aggggg.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg < 2:2205881/99‑1 (MQ=255)
aggggg.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg < 1:2500196/99‑1 (MQ=255)
gggg.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGCAATATCCCggggggg > 2:1224466/1‑100 (MQ=255)
gggg.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGt > 1:1407280/1‑101 (MQ=255)
gggg.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGt < 2:3679823/101‑1 (MQ=255)
gg.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGa > 1:2113492/1‑101 (MQ=255)
g.ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGaa < 1:3964032/101‑1 (MQ=255)
ggg.CGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.t > 1:2855095/1‑101 (MQ=255)
cTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.a > 2:3680676/1‑101 (MQ=255)
tGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGGGAA.TGGC..G.aa > 1:3321008/1‑100 (MQ=255)
gCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aag < 2:4031543/101‑3 (MQ=255)
gCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aag > 1:301015/1‑99 (MQ=255)
cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATCCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGGC.TGGC..G.aagcc > 2:2595949/1‑97 (MQ=18)
cccccCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagc < 2:1014895/101‑4 (MQ=255)
cccgtCCGCAATCTGACTCCCCCCGTGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccag < 1:713144/97‑7 (MQ=18)
cccgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccag < 1:1478641/97‑7 (MQ=255)
cgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccagag < 1:4031167/99‑9 (MQ=255)
gtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccagagg < 2:4026053/100‑10 (MQ=255)
aaGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCa < 1:1217599/101‑1 (MQ=18)
cGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCagcg > 1:262851/1‑98 (MQ=18)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAGGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCaccgc > 1:1861491/1‑97 (MQ=17)
gACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cc > 2:3495375/1‑101 (MQ=17)
aCTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.ccc > 2:181846/1‑101 (MQ=17)
cTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cccc < 2:1471921/101‑1 (MQ=17)
tCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.ccccc > 2:633975/1‑101 (MQ=17)
tCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.ccccc > 2:321368/1‑101 (MQ=18)
cccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cccccct < 2:936538/101‑3 (MQ=17)
cccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cccccct < 1:4113550/101‑3 (MQ=17)
cccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cccccct > 2:3155734/1‑99 (MQ=17)
cccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.acccccg > 2:2285455/1‑99 (MQ=17)
cccGGGATAGTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCG.cccccctgc < 2:2113354/101‑5 (MQ=17)
cGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGA..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGccc < 1:3748899/101‑1 (MQ=17)
ggATATTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCCAAGAGGGGGCAGCG.CCCCCTGCCCcg > 1:176553/1‑101 (MQ=2)
ggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCcg < 2:1524554/101‑1 (MQ=17)
gATATTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCCAAGAGGGGGCAGCG.CCCCCTGCCCcgc < 1:76569/101‑2 (MQ=0)
gATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCcgg > 2:3035939/1‑101 (MQ=18)
atatTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCCAAGAGGGGGCAGCG.CCCCCTGCCCcgcc > 2:2911175/1‑99 (MQ=2)
atatTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGGGAA.TGGC..GAAGCCAGAGGGGGGC.CGCGCCCCCCCGCCCcggc > 1:1983187/1‑101 (MQ=14)
atTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCcggcgg > 1:3984679/1‑101 (MQ=17)
atTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCcggcgg > 2:3916301/1‑101 (MQ=18)
ttGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCCAAGAGGGGGCAGCG.CCCCCTGCCCcgccggat < 1:582313/101‑3 (MQ=2)
gcagcaAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGCATCCC.CCCCCTGCCCCGGCGGTCCg < 2:3138149/101‑1 (MQ=18)
agcaAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTCCGTg < 2:1717607/101‑1 (MQ=17)
agcaAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATAGCCCGGGGGGTGAA.TGGC..GAAGCCAGAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTCCGTg < 1:181884/101‑1 (MQ=17)
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GCGTCTGGCCCAGCGCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAA..GGGG.GGG.CGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.AGCAGAAGGGGGGCAAGCG.CCCCCTGCCCCGGCGGTCCGTG > NC_014034/2493904‑2494102
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|