| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,494,016 | C→G | 6.9% | intergenic (+64/‑178) | RCAP_rcc02319 → / → RCAP_rcc02320 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,494,016 | 0 | C→G | 6.9% | 17.8 ‑1.1 ‑0.5 | 144 | intergenic (+64/‑178) | RCAP_rcc02319/RCAP_rcc02320 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (6/4): ref base (59/75): total (65/79) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.47e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.89e-01 | ||||||||||
Only 100 of 155 total aligned reads displayed.
GCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAA..GGGGGGGCGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.AGCAG..AAGGGGGGCAAGCG.CCCCCTGCCCCGGCGGTCCGTGGCGGCGCCTTGAC > NC_014034/2493918‑2494115
|
gccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg < 2:2745107/101‑1 (MQ=21)
gccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg > 2:2630897/1‑101 (MQ=21)
gccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCg < 2:2226720/101‑1 (MQ=21)
ccgcGGCGGGCGCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCgg < 1:93742/101‑1 (MQ=21)
gcggcgGGCGCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAt < 1:3278494/101‑1 (MQ=21)
cggcggGCGCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATg < 2:1528402/101‑1 (MQ=21)
ggcgggcgCGCGGCACGACAGGCCGAGTAAG.GGGGGGGGGCTGCCCCCCGTCCGCCAGCGGGCTCCCCCCGGGATATTTTCAGCAAGATGAAACCGGATGc > 2:2461382/1‑101 (MQ=18)
ggcgggcgCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGc < 1:2661231/101‑1 (MQ=21)
cgggcgCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCt > 2:1314684/1‑101 (MQ=21)
gggcgCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCtt > 2:1217505/1‑101 (MQ=21)
gggcgCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCCGGCTCCCCCCGGGATATTTGCAGCAAGAGGAAACCGGATGCCtt > 2:1852319/1‑101 (MQ=21)
ggcgCGCGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCttt < 2:3798128/101‑1 (MQ=21)
gcgcgcGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc < 2:1834049/101‑1 (MQ=21)
gcgcgcGGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTc > 1:2611616/1‑101 (MQ=21)
ggcgcgGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa < 2:1565830/100‑1 (MQ=18)
cgcgcgGCACGACAGGCCGAGTAAGGGGGGGGGCGCTGCCCCCCGCCCGCAAGCGGACTCCCCCCGGGAATTTTGCAGCAAAATGAAACCGGAGGCCTTTc > 1:1059554/1‑101 (MQ=18)
cgcgcgGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCa < 1:337161/101‑1 (MQ=21)
gcgcgGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGACTTTCAt > 2:734027/1‑101 (MQ=18)
gcgGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCt > 1:3138380/1‑101 (MQ=21)
cggccggACAGGCCGAGTAAG.GGGGGGGCCCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt < 1:2413190/95‑1 (MQ=18)
cgGCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCtt < 1:134877/101‑1 (MQ=21)
ggCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTg < 1:1480471/101‑1 (MQ=21)
gCACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGc > 2:1165122/1‑101 (MQ=21)
cACGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGcc > 1:1014986/1‑101 (MQ=21)
aCGACAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGGCTTTCATCTTGccc > 2:3040367/1‑101 (MQ=18)
cAGGCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCCGGGCATTTGCAGAAAGATGAAAACGGATGCCTTTTATCTTGTCCGaca > 1:833567/1‑99 (MQ=17)
ggCCGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAata < 1:3201927/101‑1 (MQ=21)
cGAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATcc < 1:746828/101‑1 (MQ=21)
gAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc < 1:275202/101‑1 (MQ=18)
gAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATccc > 2:3928627/1‑101 (MQ=18)
gAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCCTGCCCGAAATATccc > 2:4030906/1‑101 (MQ=18)
gAGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAAACGGATGCCTTTCATCTTGCCCGAAATATccc > 1:3947124/1‑101 (MQ=18)
aGTAAG.GGGGGGGCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCg < 1:1137456/101‑1 (MQ=18)
aggaaggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCg < 2:177793/95‑1 (MQ=18)
gtaaggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgg < 1:41580/96‑1 (MQ=255)
taaggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggg > 1:1814213/5‑101 (MQ=255)
taaggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGAGATTTGCAGCACGATGAAACCGGATGCCTTTCATATTGCCCGCAATATCCCcgg > 2:2879137/5‑101 (MQ=18)
taaggggggggCCCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGCGATATTTGCAGCAAGATGAAACCCGATGCCTGTCATCTTTGCCGAAACATCCCcgg > 2:2503285/5‑101 (MQ=14)
aagggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggg < 1:3531791/97‑1 (MQ=255)
aaggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggg < 1:2488527/98‑1 (MQ=255)
aggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg < 2:2205881/99‑1 (MQ=255)
aggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggg > 2:1781926/3‑101 (MQ=255)
ggggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCgggggg > 1:2602730/2‑101 (MQ=255)
gggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCggggggg > 1:2476508/1‑100 (MQ=255)
gggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGt < 2:3679823/101‑1 (MQ=255)
gggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGt > 1:1407280/1‑101 (MQ=255)
ggggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCcgggggcg > 1:4000270/1‑99 (MQ=255)
gggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGa > 1:2113492/1‑101 (MQ=255)
ggggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGaa < 1:3964032/101‑1 (MQ=255)
gggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.t > 1:2855095/1‑101 (MQ=255)
ggCGCTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.Tg > 1:1980829/1‑101 (MQ=255)
cgcTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGc < 1:4123983/101‑1 (MQ=255)
cTGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.a > 2:3680676/1‑101 (MQ=255)
tccccccCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aa < 1:1852439/99‑2 (MQ=255)
tGCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGGGAA.TGGC..G.aa > 1:3321008/1‑100 (MQ=255)
gCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aag > 1:301015/1‑99 (MQ=255)
gCCCCCCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aag < 2:4031543/101‑3 (MQ=255)
cccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagcc < 1:157847/101‑5 (MQ=255)
cccccCGTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagc < 2:1014895/101‑4 (MQ=255)
ccccG.TCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGGGAA.TGGC..G.aagcca > 1:3490525/1‑96 (MQ=18)
cccgtCCGCAATCTGACTCCCCCCGTGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccag < 1:713144/97‑7 (MQ=18)
cccgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccag < 1:1478641/97‑7 (MQ=255)
cccgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccag < 1:2631089/97‑7 (MQ=255)
ccgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccaga > 2:3182049/4‑94 (MQ=255)
cgtCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.aagccagag < 1:4031167/99‑9 (MQ=255)
caGCGGTCTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGCa < 2:1690685/100‑1 (MQ=18)
aaGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGCa < 1:1217599/101‑1 (MQ=18)
aaGCGCACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGCa < 1:2125088/101‑1 (MQ=18)
aGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGCag < 2:1980703/101‑2 (MQ=18)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAGGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGCaccgc > 1:1861491/1‑97 (MQ=17)
cTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCG.cccc < 2:1471921/101‑1 (MQ=17)
cTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCG.cccc < 1:2553565/101‑1 (MQ=17)
cTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCG.cccc > 2:231394/1‑101 (MQ=18)
tCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCG.ccccc > 2:633975/1‑101 (MQ=17)
tCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCG.ccccc > 2:321368/1‑101 (MQ=18)
cccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCG.cccccct > 2:3155734/1‑99 (MQ=17)
cccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCG.cccccct < 2:936538/101‑3 (MQ=17)
cccccGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCG.acccccg > 2:2285455/1‑99 (MQ=17)
cGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGA..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGccc < 1:3748899/101‑1 (MQ=17)
gggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGcccc < 2:3255155/101‑1 (MQ=17)
ggATATTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCC..AAGAGGGGGCAGCG.CCCCCTGCCCcg > 1:176553/1‑101 (MQ=2)
ggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCcg < 2:1524554/101‑1 (MQ=17)
ggATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCcg > 1:1411281/1‑101 (MQ=17)
gATATTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCC..AAGAGGGGGCAGCG.CCCCCTGCCCcgc > 1:1383546/1‑100 (MQ=0)
gATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCcgg > 2:3035939/1‑101 (MQ=18)
atatTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCC..AAGAGGGGGCAGCG.CCCCCTGCCCcgcc > 2:2911175/1‑99 (MQ=2)
atatTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCcggc > 2:2615727/1‑101 (MQ=18)
atatTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGGGAA.TGGC..GAAGCCA..GAGGGGGGC.CGCGCCCCCCCGCCCcggc > 1:1983187/1‑101 (MQ=14)
atTTGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGC..C.AAACGCCAAGAGGGGGAAGCG.CCCCCTGCCCcgccgg > 1:3675887/1‑101 (MQ=2)
atTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCcggcgg > 2:3916301/1‑101 (MQ=18)
ttGCGGCAAGATGAAGGGGCATG.ATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAA.AGGCC..AAGAGGGGGCAGCG.CCCCCTGCCCcgccggat < 1:582313/101‑3 (MQ=2)
tGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTcc > 1:3235319/1‑101 (MQ=17)
gcagcaAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTCCg < 1:3695775/101‑1 (MQ=17)
aGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTCCGTggcgg < 1:2538613/101‑1 (MQ=17)
aGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTCCGTggcgg > 2:625069/1‑101 (MQ=18)
gAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTCCGTGGGGGCGcc > 2:1265273/1‑101 (MQ=17)
aaaCCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTCCGTGGCGGGGCCt > 2:911065/1‑101 (MQ=17)
ccGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTCCGTGGCGGCGCCTTGa > 1:2841566/1‑101 (MQ=17)
cGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..GAAGCCA..GAGGGGGGC.AGCGCCCCCCTGCCCCGGCGGTCCGTGGCGGCGCCTTGAc < 1:882183/101‑1 (MQ=17)
cGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGGGAA.TGGC..GAAGCCA..GAGGGGGGCAGGGC.CCCCCTGCCCCGGCGGGCCGCGGCGGCGCCCTGAc > 1:3622924/1‑101 (MQ=17)
|
GCCGCGGCGGGCGCGCGGCACGACAGGCCGAGTAA..GGGGGGGCGCTGCCCCCGTTCCGCAAGCGGACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGATGCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGC..G.AGCAG..AAGGGGGGCAAGCG.CCCCCTGCCCCGGCGGTCCGTGGCGGCGCCTTGAC > NC_014034/2493918‑2494115
Base quality scores:
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|