| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,577 | C→T | 5.8% | intergenic (+49/+145) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,577 | 0 | C→T | 5.8% | 11.7 ‑1.6 ‑0.1 | 121 | intergenic (+49/+145) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (4/3): ref base (32/82): total (36/85) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.94e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.20e-01 | ||||||||||
Only 100 of 146 total aligned reads displayed.
CTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGG.GGCGCTGCCCCC.CTC.CT..G..CTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGAAGCGC > NC_014034/2566480‑2566677
|
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.cccccc < 2:702261/101‑1 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCg < 1:2181231/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCgg < 1:503621/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCgg < 1:1099121/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCgg < 1:2944444/101‑1 (MQ=25)
gCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGTGGGGCTGCCCCC.CTC.TT..GGCCCTCCGCC.AATTCA.CCCCCCcgg > 2:3490303/1‑101 (MQ=25)
cccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGa < 1:1829286/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCCGCCCCC.CCCTTT..GC.CTTCGGCC.AAATCA.CCCCCCcggga > 1:1978096/1‑99 (MQ=255)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGat < 2:2168907/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGat < 2:4180170/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGat < 1:3194193/101‑1 (MQ=25)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCTGCCCCC.CCC.TT..GGCCTTCCGCC.AAATCC.CCCCCCCGGgta > 2:3168341/1‑101 (MQ=255)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGata < 2:1018617/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCCGGatat > 1:2119448/1‑101 (MQ=25)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATAttt < 1:1697153/101‑1 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATAttt < 2:77585/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGc < 1:1268244/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCCGCCCCC.CTC.TTTGG..CCTCGGCCAAATCCA.CCCCCCcggtacttttggg > 2:3685661/1‑91 (MQ=255)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCa < 2:2900729/101‑1 (MQ=21)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCCGGCTATTTCGGGCa > 2:861613/1‑101 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAGCGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCaa < 1:473092/101‑1 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CCC.TT..GGCCTTCGGCC.AATTCA.CCCCCCCGGAGAtttttggcca > 2:3957956/1‑94 (MQ=18)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCTGGCCCC.CTC.TT..GGCCTTTCGCC.AATTCA.CCCCCCCGGACATTTCGGGCAAGaa > 1:3980246/1‑100 (MQ=255)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:1620144/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:2060072/101‑1 (MQ=21)
cgccgcGACATCGGCGGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:523134/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATa < 2:3108432/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.CATTCA.CCCCCCCGGATATTTCGGGCAAGATaaa > 1:3906941/1‑101 (MQ=21)
gcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAaag < 1:430223/101‑1 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAaaga > 2:3176725/1‑101 (MQ=21)
tCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTc > 1:3848117/1‑101 (MQ=21)
tCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTc < 1:3471783/101‑1 (MQ=21)
ggCTGGGGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:3073594/101‑1 (MQ=21)
ggCTGGCGCGCCCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:1943026/101‑1 (MQ=21)
gCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCttt < 2:1078597/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 1:2327547/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc < 1:3248456/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc > 2:1009588/1‑101 (MQ=21)
gcgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:3376059/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:2512408/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:1830164/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:2428260/101‑1 (MQ=21)
gcgcTCTGAGGCGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa < 1:2096435/101‑1 (MQ=21)
cgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt < 1:4145111/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:31132/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:22833/101‑1 (MQ=21)
tctGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 1:298907/101‑1 (MQ=21)
ctGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg < 1:569431/101‑1 (MQ=21)
tGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTGTTTTTTTTTCTTCTTGc > 2:853783/1‑101 (MQ=18)
tGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGc > 2:2272230/1‑101 (MQ=21)
gagaCGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc > 1:1222553/1‑101 (MQ=21)
gagaCGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc > 2:1826958/1‑101 (MQ=21)
agaCGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGccc < 2:236725/101‑1 (MQ=21)
aCGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGa > 1:1787489/1‑101 (MQ=21)
cGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa > 2:3077751/1‑101 (MQ=21)
gAAACGGGG.GGCGCTGCTCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:3806296/101‑1 (MQ=21)
gAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:1593263/101‑1 (MQ=21)
gAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:2702264/101‑1 (MQ=21)
aacgggg.ggCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCACCCCCCCGGGAAATTT.GGGCCAGAAAAAGAAAGGCTTTTTCTTTCATCTTTcccccaaaa > 1:2185736/5‑95 (MQ=2)
aacgggg.ggCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata < 1:3581109/97‑1 (MQ=25)
acgggg.ggCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAatat < 2:4156408/98‑1 (MQ=25)
cgggg.ggCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 2:1120311/99‑1 (MQ=25)
cgggg.ggCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 2:4015211/99‑1 (MQ=25)
gggg.ggCGCTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc < 2:1571825/100‑1 (MQ=25)
aggg.ggCGCTG.CCCC.CTC.TT..GGCCTTTGGCC.AATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg > 1:4076720/2‑101 (MQ=0)
gg.ggCGCTGCCCCCTCTT.GG..C..CTTTGGCC.AATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggga < 1:3959563/101‑3 (MQ=2)
g.ggCGCTG.CCCC.CTC.TT..GGCCTTTGGCC.AATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 1:1254032/1‑98 (MQ=2)
ggCGCTGCCCCCTCTT.GG..C..CTTTGGCC.AATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggagc < 1:1048067/101‑5 (MQ=2)
cgcTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCCAAATATCCCggggg > 2:3022218/1‑101 (MQ=25)
gcTGCCCCC.CTC.TT..GGCCTTCGGCC.AATTCT.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGa < 1:2866857/101‑1 (MQ=37)
ccgCCCCC.CTC.TT..GGCCTTCGGCC.AAGTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAg < 2:3568447/99‑1 (MQ=37)
ccctcttggccTTCGGCC.AATTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCt < 1:1052427/91‑1 (MQ=38)
ccctcttggccTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCt < 1:93659/91‑1 (MQ=255)
ctcttggccTTCGGCC.AATTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTg < 2:2117738/93‑1 (MQ=255)
cttggccTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcg > 2:3746717/7‑101 (MQ=255)
ttggccTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcgg < 2:2553261/96‑1 (MQ=255)
ttggccTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcgg < 1:3070202/96‑1 (MQ=255)
ggccTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcgggc > 1:1210820/4‑101 (MQ=255)
ggccTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcgggc > 1:721715/4‑101 (MQ=255)
ggccTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTCATCTTGCCCGAAAGATCCCGGGGGACCCCGCCTgggggc > 1:3885267/4‑101 (MQ=25)
ccTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTgcgggcag > 2:1717474/2‑99 (MQ=255)
cTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGcgggcggg > 2:2407805/1‑101 (MQ=255)
cGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGc < 2:2144179/101‑1 (MQ=255)
ggCC.AATTCA.CCCCCCGGGATATTTTGGGCGAGATAAAGAAGGGGTTTTTCTTTTCTCTTTCCCGAAAAATCACGGGGGGGGCCGCCTCGTGGCggggggg > 2:756706/1‑99 (MQ=16)
gCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAg < 1:3377084/101‑1 (MQ=255)
c.AAGTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAgcg < 1:1876199/101‑1 (MQ=255)
aaTTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAgcgc > 2:1742483/1‑101 (MQ=255)
aTTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGcc > 1:3091680/1‑101 (MQ=255)
aTTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGcc > 1:2704649/1‑101 (MQ=255)
ttCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGccc > 1:652542/1‑101 (MQ=255)
tCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCAGGGGAGCCCGCTTGCGGGGGGGGGGAGCGcccc > 2:1633744/1‑101 (MQ=255)
cA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGccccc < 1:2029001/101‑1 (MQ=255)
a.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCg > 1:584338/1‑101 (MQ=255)
cccccGAGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGaa < 2:2040485/101‑1 (MQ=255)
cccGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGAAgc < 1:88752/101‑1 (MQ=255)
cccGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGAAgc < 1:1742602/101‑1 (MQ=255)
ccGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGAAgcg < 1:3962109/101‑1 (MQ=255)
ccGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGAAgcg > 2:1190061/1‑101 (MQ=255)
cGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGAAgcgc > 1:946245/1‑101 (MQ=255)
cGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGAAgcgc > 1:1676698/1‑101 (MQ=255)
|
CTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGG.GGCGCTGCCCCC.CTC.CT..G..CTTCGGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCTTGCGGGCGGGGGCAGCGCCCCCGAAGCGC > NC_014034/2566480‑2566677
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|