| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,640,191 | G→C | 15.0% | intergenic (‑167/+109) | thrS ← / ← RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,640,191 | 0 | G→C | 15.0% | 43.1 ‑3.5 0.0 | 131 | intergenic (‑167/+109) | thrS/RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (14/6): ref base (48/63): total (62/69) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.11e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 141 total aligned reads displayed.
ACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGG.CTT.CGGCCAATT.CGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGC > NC_014034/2640092‑2640291
|
aCGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTgg < 2:2249054/101‑1 (MQ=255)
cgcgGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGa < 1:3522607/101‑1 (MQ=255)
gcggcgGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CGCCCCCCGAGGTATTTGGag < 1:1966406/101‑2 (MQ=255)
cggcggCAGGCGTGTCAACCGGGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGagc < 1:758480/101‑3 (MQ=25)
ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCa < 2:816660/101‑1 (MQ=37)
ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCa < 2:2035462/101‑1 (MQ=37)
ggcggcAGGCGTGTCAACCGTGGCGCTTTTGCGAAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCa < 1:3662671/101‑1 (MQ=25)
ggcAGGCGTGTCAACCGTGGCGCTTTGGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGa < 2:694869/101‑1 (MQ=25)
gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCCGCCCCCCCC.CTTC.CTTCCTGCCAATC.CTCCCCCCCCGCGATTTGGAGCaaaaa > 1:1838174/1‑98 (MQ=255)
cAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATg < 2:2116866/101‑1 (MQ=37)
aGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CCCCCCCCGAGGTATTTGGAGCAATATGa < 2:4096019/101‑1 (MQ=25)
ggggttccacccGTGGCACTTTTGCCAAGGC.AAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaa < 2:3804816/91‑1 (MQ=17)
ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaa < 1:1203772/101‑1 (MQ=25)
gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaa < 2:3662876/101‑1 (MQ=25)
aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg < 2:2487968/101‑1 (MQ=21)
aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg < 1:3137833/101‑1 (MQ=25)
ccGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATggg < 1:1451997/101‑1 (MQ=25)
gcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCt < 1:2672922/101‑1 (MQ=25)
cTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCtt < 1:3089224/101‑1 (MQ=21)
ttttGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTg < 2:3042280/101‑1 (MQ=25)
tGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCt < 1:3837973/101‑1 (MQ=21)
gcgcAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc < 1:251102/101‑1 (MQ=25)
cgcAGGCAAAAGGGGGGGGCGGCCCCCCCCTTTGGCCTT.CGGCCAATTACCCCCCCCGGGGT.TTTGG.GGAAGAAGAAAAAACAAGGGGTT.ATCTTTCCTCa > 2:1067304/1‑101 (MQ=255)
cgcAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCa < 1:925952/101‑1 (MQ=25)
cAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaaa < 2:1433926/101‑1 (MQ=25)
cccgaaaAGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat < 1:536724/97‑1 (MQ=17)
cccgaaaAGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGACATTTGCGGCAAGGTGAAAGGA..TGGGGCTTATCTTGCCCCAAatat > 2:1809181/5‑101 (MQ=9)
gCAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat < 2:1115952/101‑1 (MQ=25)
cAAAAGGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATc > 2:3948178/1‑101 (MQ=21)
gaaaAGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc < 2:1086767/100‑1 (MQ=17)
gaaaAGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc < 2:2171381/100‑1 (MQ=17)
aaaAGGGGGCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGGGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATCCCg > 1:131524/1‑101 (MQ=17)
ggggggCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg > 1:1356940/1‑101 (MQ=21)
ggggggCCCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg < 2:2338473/101‑1 (MQ=25)
agggggCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg > 2:4098878/2‑101 (MQ=18)
agggggCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg > 1:529732/2‑101 (MQ=18)
gggggCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg > 2:1643891/1‑101 (MQ=18)
gggggCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggg < 2:1443836/101‑1 (MQ=25)
ggggCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg > 2:4027452/1‑101 (MQ=18)
ggggCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg > 2:2878552/1‑101 (MQ=18)
gggCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATCCCgggggtg > 1:4120356/1‑99 (MQ=18)
gggCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg < 1:3920565/101‑1 (MQ=25)
ggCGCTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa < 2:2075963/101‑1 (MQ=25)
gcgcTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag < 2:3270389/101‑5 (MQ=21)
gcgcTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAg < 2:3909766/101‑1 (MQ=25)
cgcTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGt < 2:3468420/101‑1 (MQ=25)
gcTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc > 2:3670734/1‑95 (MQ=21)
gcTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGNGNGtn > 1:1363739/1‑100 (MQ=25)
cTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGGGAAATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggcg > 1:960724/1‑94 (MQ=25)
cTGCCCCCCTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTcc > 2:236615/1‑101 (MQ=25)
gCCCCCCTC..TGG.CTT.C..CCCATT.CCCCCCCCGGGGTATTTCGGGCAAGATGAAAGGCATCCGGTTTCATCTTGCTGCAAATATCCCGGGGGGAGTccgcttg < 1:3647441/101‑6 (MQ=17)
cccccTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa < 1:14955/101‑1 (MQ=25)
cccccTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaa > 2:3092790/1‑101 (MQ=37)
ccccTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa < 1:3978114/101‑1 (MQ=37)
tcttc.tTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg < 1:337064/98‑1 (MQ=25)
cccTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg > 1:1352283/1‑101 (MQ=37)
cccTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg > 1:1208728/1‑101 (MQ=37)
ccTC.TTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg > 2:2793688/1‑101 (MQ=37)
ctc.tTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa > 1:336164/1‑101 (MQ=37)
tc.tTGGCCTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc > 1:2479405/1‑101 (MQ=37)
tc.tTGGCCTT.CGGCCAATT.CAACCCCCGAGGAATTTGGAGCAAGATG.AAAGACCATGGGTTAATCTTGAATCAAATATCCCGGGGGGAGTCCTGAAAgaga > 2:337013/1‑98 (MQ=25)
ttggccTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg > 1:144686/6‑101 (MQ=37)
tggccTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 1:3496281/5‑101 (MQ=37)
tggccTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGAAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 1:4197583/5‑101 (MQ=37)
ggccTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggg > 1:2898838/4‑101 (MQ=37)
ggccTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggg < 1:1280080/98‑1 (MQ=37)
ccTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggggg > 2:468205/2‑101 (MQ=37)
cTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc > 2:1764107/1‑101 (MQ=37)
cTT.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc > 1:824355/1‑101 (MQ=37)
tt.CGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCa > 2:4017796/1‑101 (MQ=37)
ctgcGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCGTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc < 1:886318/98‑1 (MQ=37)
cGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga > 2:3534400/1‑101 (MQ=255)
cGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga > 1:3003586/1‑101 (MQ=255)
ggCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag < 1:3158304/101‑1 (MQ=255)
gCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGc > 2:490034/1‑101 (MQ=37)
gCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGc > 1:1952819/1‑101 (MQ=37)
cAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc > 1:3660143/1‑101 (MQ=37)
aaTT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc > 2:3597345/1‑101 (MQ=37)
aaTT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc < 2:67344/101‑1 (MQ=255)
aTT.CGCCCCCCGAGGTATTTGGAGCAAGATG.AAAGCCCATGGGGTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc < 2:463192/101‑1 (MQ=25)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 2:4042349/3‑101 (MQ=255)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 2:1520481/3‑101 (MQ=255)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGAGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 1:1174196/3‑101 (MQ=37)
accccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc > 1:4120075/2‑101 (MQ=255)
ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc > 1:2928867/1‑101 (MQ=255)
ccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCgg < 1:3093020/101‑1 (MQ=255)
ccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCgg < 1:1709259/101‑1 (MQ=255)
cccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCggg > 2:2605875/1‑101 (MQ=255)
cGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTc < 1:3948438/101‑1 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt > 1:2761305/1‑101 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt > 2:1804722/1‑101 (MQ=255)
gAGGTAGTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt < 1:2254934/101‑1 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt < 1:2793907/101‑1 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt > 1:2040531/1‑101 (MQ=255)
ggTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCttt < 2:2878654/101‑1 (MQ=255)
gTATTTGGAGCAAGATG.AAAGACCATGCGTTCATCTGGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc < 1:1785083/101‑1 (MQ=25)
tttGGAGCACGATG.AAAGACCATGGGATCATCTTGCCTCAAATAGCCCGGGGGAAGTCCTGAAAGGACGCGGTGCTGACCCCCCCACCCCACTCTTTTTCa > 2:752225/1‑101 (MQ=16)
ttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa > 1:3191625/1‑101 (MQ=255)
tGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAg < 1:2451474/101‑1 (MQ=255)
ggAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc > 1:1490583/1‑101 (MQ=255)
|
ACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGG.CTT.CGGCCAATT.CGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGC > NC_014034/2640092‑2640291
Base quality scores:
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|