Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 448,780 | A→C | 4.3% | intergenic (+73/+147) | RCAP_rcc00419 → / ← pykA1 | NADH:flavin oxidoreductase/NADH oxidase/pyruvate kinase |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 448,780 | 0 | A→C | 4.3% | 5.0 ‑0.4 ‑0.7 | 97 | intergenic (+73/+147) | RCAP_rcc00419/pykA1 | NADH:flavin oxidoreductase/NADH oxidase/pyruvate kinase |
Reads supporting (aligned to +/- strand): new base (4/1): ref base (56/36): total (60/37) | ||||||||||
Fisher's exact test strand distribution p-value = 6.46e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.79e-01 |
Only 100 of 139 total aligned reads displayed.
TGCGCTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCAGGCGGTCGTGCCG > NC_014034/448680‑448874
|
ttggcTGCGGGTGGTGAAGGACGTTTGAGGCTTACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.Ca < 1:1234386/98‑1 (MQ=38)
gcgcTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CAc < 2:3567571/101‑1 (MQ=255)
gcTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTc > 2:1657066/1‑101 (MQ=255)
cTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCg < 2:2392599/101‑1 (MQ=255)
tGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCgg > 2:2725462/1‑101 (MQ=255)
tGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCgg < 2:777101/101‑1 (MQ=255)
cGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.cc > 2:63829/1‑101 (MQ=255)
cGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.cc < 1:1490525/101‑1 (MQ=255)
cGGCTAATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.cc < 2:110670/101‑1 (MQ=255)
ggCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCt > 2:4056636/1‑101 (MQ=255)
gCTGATGAAGGCCGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTg < 2:884883/101‑1 (MQ=255)
gCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTg < 1:3251722/101‑1 (MQ=255)
gCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTg < 2:840609/101‑1 (MQ=255)
cTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGGGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTgc < 1:868274/101‑1 (MQ=255)
cTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTgc < 2:3744501/101‑1 (MQ=255)
tgatgaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTgcg < 1:3097246/101‑1 (MQ=255)
gatgaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTgcgc > 2:938548/1‑101 (MQ=255)
atgaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGcgcc < 1:4100939/101‑1 (MQ=255)
atgaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATAGCAACAGAGGTACTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.ccgaaacc > 1:1169554/1‑95 (MQ=38)
tgaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGcgccc > 2:1160921/1‑101 (MQ=255)
gaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGcgcccg < 1:1632013/101‑1 (MQ=255)
gaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGcgcccg < 2:3400326/101‑1 (MQ=255)
gaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGcgcccg > 1:4144913/1‑101 (MQ=255)
ggACGTTGGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCgcccgccc < 2:2199512/101‑1 (MQ=255)
gccGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGcccgcccc < 1:3692845/99‑1 (MQ=255)
gACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGcccgcccc > 1:1078532/1‑101 (MQ=255)
gACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGcccgcccc > 1:3377567/1‑101 (MQ=255)
aggTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGcccgccccg < 2:4166093/99‑1 (MQ=255)
cGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGcccgccccgc < 2:2654325/101‑1 (MQ=255)
cGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGcccgcccccc > 2:945760/1‑99 (MQ=255)
gTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCccgccccgcc > 2:1953455/1‑101 (MQ=255)
gTTTGAGGCTGACTTGCCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCccgccccgcc < 2:3976850/101‑1 (MQ=255)
tttGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGCCCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCa < 1:1561817/101‑1 (MQ=255)
tttGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCa > 1:2454037/1‑101 (MQ=255)
ttGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCAt > 2:1314652/1‑101 (MQ=255)
ttGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCAt > 2:416467/1‑101 (MQ=255)
tGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATc < 2:79136/101‑1 (MQ=255)
tGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATc < 2:68796/101‑1 (MQ=255)
aGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATcgg > 1:2344726/1‑101 (MQ=255)
aGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATcgg > 1:2097003/1‑101 (MQ=255)
gCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATcggcg > 1:3696866/1‑101 (MQ=255)
tGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCggcggg > 1:982153/1‑101 (MQ=255)
gACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCggcgggg > 1:2978436/1‑100 (MQ=255)
ctggcccTCGGCCATTGCCGAGCCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGCCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGgcgc < 2:1995102/96‑1 (MQ=255)
cTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCCTCggcgggggg > 2:1973642/1‑98 (MQ=255)
ttGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCTGgggcc > 2:1744074/1‑100 (MQ=255)
ttGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGGCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCCCCCGCCCCGCCATCggccggccgc > 2:1372932/1‑98 (MQ=25)
tgggCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGCCCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCa < 1:1769026/99‑1 (MQ=255)
tgggCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCa < 2:3633192/99‑1 (MQ=255)
tggcccccGGCCTTGGCGGGGGCCAACCGCAACGGAGGTCTGGTGCCCGCCGGGGGCCCAAG.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCa < 1:2256554/94‑1 (MQ=9)
tGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCggcgggggggg > 1:1062596/1‑96 (MQ=255)
tGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCaa > 1:3002705/1‑100 (MQ=255)
ggCCTCGGCCATTGCCGGGGCCAATCGCAACAGAGGTCCTGTGCCCGCCGGGGGCCCAAA.GG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGt < 1:3059284/101‑1 (MQ=18)
gcccgggCCTTTGCCGAGCCCAACCCAAACGGGGGTCCTGTGCCCGCCGAGGGCCCAAA.GG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTc < 2:1663265/96‑1 (MQ=14)
gCCTCGGCCATTGCCGAGGCAAATCGCAACGGGGTTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTc < 2:3358773/101‑1 (MQ=21)
ccccGGCCTTTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCAAAA.GG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTc.g < 1:757588/98‑1 (MQ=18)
ccccGGCCATTGCCGAGCCAAATCGCAACAGAGGTCCTGTGCCCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTc.g < 2:829803/98‑1 (MQ=21)
ccTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCggcggggggggggg > 1:3213369/1‑93 (MQ=255)
ccTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGgggcgggcg > 1:359755/1‑96 (MQ=255)
cTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCggcggggggccgggc > 1:709535/1‑92 (MQ=255)
tCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCggcggggggcggggcg > 2:2999835/1‑91 (MQ=255)
cGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGgggcgggggggc > 1:1785582/1‑93 (MQ=255)
cGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGGAGGC.gc.gc > 2:2327657/1‑101 (MQ=255)
gCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.Gc.gccg < 2:2518402/101‑1 (MQ=255)
ccATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGGGGGC.Gc.gccgc > 2:2873342/1‑101 (MQ=25)
ccGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGGGGGC.GC.GCCGCCcgggg > 1:3709648/1‑100 (MQ=21)
cGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGGGGGC.GC.gcccccccgggg > 1:3006396/1‑95 (MQ=18)
ggggCCAACCGCAACGGGGGTCCTGTGCCCGCGGGGGGCCCAAG.GG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCgg < 1:3359733/99‑1 (MQ=14)
gAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCGGGC.GC.gcccccccggggg > 2:4038686/1‑94 (MQ=21)
aGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGGGGGG.GC.CCCGCCCGGGCggg > 1:1235503/1‑100 (MQ=18)
ggCAAATGGCAACAGGGGTCCGGGGACCGCCGAGGCCCCAAG.GG.CACTCGC.CCTGCCCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAg < 1:1575132/101‑1 (MQ=17)
gCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCCGGCGGC.GCCCCCggggggcgg > 1:2228573/1‑96 (MQ=18)
ccAACCGCAACAGGGGTCCTGTGCCCCCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAgcg < 1:1984440/101‑1 (MQ=17)
ccAACCGAAACGGGGGTCCTGTGCCCGCCGAGGCCCCAAA.GC.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAgcg < 2:2920060/101‑1 (MQ=14)
cAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCAGGC.GC.GCCCCCCGGGGGGGgcgc > 1:1705751/1‑101 (MQ=18)
ccGCAACGGAGGTCCGGTGCCCGCCGAGGGCCCAAA.GG.CACGCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAgg < 1:3780677/100‑1 (MQ=17)
caagcgggggTCGTGTGCCCGCCGAGGCCCCAAA.GG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGcc < 2:1687442/93‑1 (MQ=11)
aaaCAGAGGCCGTGTGCCCGCCG.GGGCCCAAAGGG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCct < 2:2892451/100‑1 (MQ=14)
accgggggTCCTGGGCCCGCCGGGGGCCAAAG.GC.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCctc < 1:434935/95‑1 (MQ=14)
cggggtcccTGTGCCCGCCGAGGGCCAAAA.GG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCCTCtg < 2:3682363/94‑1 (MQ=11)
aggggTCGTGTGCCCGCGGGGGGCCCAAG.GC.CATTGGG.CGTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCCTCtgt < 1:1400201/98‑1 (MQ=14)
agaaGTCCCGTGACCGCCGGGGGCCCAAA.GG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCGGAG.GCGGCCCCCGGGCCGGGgcggcgggcccgc > 2:2115876/1‑91 (MQ=14)
ggccTGGGCCCCCCGGGGGCCCCAA.GG.CCCCCGGCCCGGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCCTCtgttgt < 1:2910055/99‑1 (MQ=11)
tCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCACCCGCCCCGCCATCGGCGGGGGCGGGG.GCGGCCGCCGGGGGGGGGGGCGGGccccgtttttc > 2:1055170/1‑92 (MQ=9)
tgtgACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGGAGGC.GC.GCCGCCCGGGGGGGGGGCCGGCCCCCGTTGGGCTTg > 1:564101/1‑101 (MQ=14)
tgtgACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCGGGC.GG.GCCCCCGGGGGGGGGGGCAGGGCCCCGTTGTGTTTg > 2:452996/1‑101 (MQ=14)
gACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGGCGGC.GC.GCCGCCCCGGGGGGGGGGGGGGCCCCGTTGTGGTTgggg > 2:1396/1‑101 (MQ=2)
gACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCCGGC.GC.GCCCCCCGGGGGGGGGGGGGGCCCCCGTTGTGCTTtggg > 1:2040424/1‑101 (MQ=9)
cccgccgAGGGCCCAAG.GG.CACCCGG.CCTGCCCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGc < 1:1055264/100‑1 (MQ=255)
cccgcgggggCCCAAAGGG.CACCCGC.CCGGCCCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGc < 1:3876431/94‑1 (MQ=14)
ccagcgAGGGCAGAAA.GG.CAGTGGG.CCGGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCa < 2:3308583/97‑1 (MQ=14)
ggcgAGGGCCCAAA.GG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCCGTC.GC.GCCGCCCGGGGGGGGGGCGGGGCCCTGGTCTGCTTtgggggac > 1:2836779/3‑97 (MQ=2)
cccgGGGGCCCAAA.GGCCCCCCGG.CCTGCCCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCAg < 1:3000057/100‑1 (MQ=11)
ccgAGGGCCCAAA.GG.CCCTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCAATC.CG.GCCGCCCGCGCGGGGGGGCCGCCTCTTTTGTGCCTcggggtgga > 1:4156085/1‑96 (MQ=2)
ccgAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGGCGGC.GC.GCCCCCCGGGGGGGGGGCCGGGCCCCGTTGTTCTTTGGGGAggg > 2:3717344/1‑100 (MQ=9)
cgAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCGGGC.GC.GCCGCCGGGGCGGGGGGCCGGGCCCTGTTGTGGTTtggggggggg > 1:3273965/1‑95 (MQ=11)
aGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCCGGC.GC.CCCCCCCGGGGGGGGGGCCGGGCCCCCTTTTGCTTgggggggggggg > 1:3957797/1‑93 (MQ=2)
gggCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGCAGGC.GC.CGCCCCCGGGCGGGGGGCGGGGCCCCGTTCTTCTTGTGGCAggggcgc > 1:3859423/1‑96 (MQ=9)
ggccccAAG.GG.CGCCCGG.CGCGCCCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCAGGCGGTc < 1:1361768/98‑1 (MQ=17)
aaa.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGGGGCGGC.GC.GCCCCCCGGGGGGGGGGGGGGCCCCCGCTGTGGTTTGGGGGGGCggggggggcg > 1:2403168/1‑93 (MQ=2)
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TGCGCTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCCAATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGG.CCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTC.GC.GCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCAGGCGGTCGTGCCG > NC_014034/448680‑448874
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|