| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,209,679 | 1 bp→GG | 100% | intergenic (+11/‑260) | cobO → / → cobQ1 | cob(I)yrinic acid a,c‑diamide adenosyltransferase/cobyric acid synthase CobQ |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,209,678 | 1 | .→G | 100.0% | 156.8 | 168 | intergenic (+10/‑261) | cobO/cobQ1 | cob(I)yrinic acid a,c‑diamide adenosyltransferase/cobyric acid synthase CobQ |
| Reads supporting (aligned to +/- strand): new base (32/91): ref base (23/22): total (55/113) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.96e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.69e-01 | ||||||||||
| * | NC_014034 | 2,209,679 | 0 | C→G | 100.0% | 115.9 | 168 | intergenic (+11/‑260) | cobO/cobQ1 | cob(I)yrinic acid a,c‑diamide adenosyltransferase/cobyric acid synthase CobQ |
| Reads supporting (aligned to +/- strand): new base (32/93): ref base (23/20): total (55/113) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.24e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.81e-01 | ||||||||||
Only 100 of 195 total aligned reads displayed.
ATCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAAGGC.C..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACAGGGA > NC_014034/2209579‑2209780
||||
aTCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..g > 2:983916/1‑101 (MQ=255)
aTCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..g < 1:1109642/101‑1 (MQ=255)
aTCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..g < 1:3196282/101‑1 (MQ=255)
tCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..gg < 2:2040983/101‑1 (MQ=255)
tCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..gg < 1:2515611/101‑1 (MQ=255)
cGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCC.C..gg > 1:179292/1‑101 (MQ=255)
cGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTCCTGATCTC.AAGGC.C..ggg > 2:3803056/1‑101 (MQ=255)
gAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..gggg > 2:2825330/1‑100 (MQ=255)
gAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..gggg < 2:3033731/101‑2 (MQ=255)
ggcggcCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..GGgggc < 1:366962/101‑1 (MQ=255)
ggcggcCGATCAAGTGACCGAGATGGGTCANTTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..GGgggc < 1:662836/101‑1 (MQ=255)
ggcCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..gggggggct > 2:1859007/1‑95 (MQ=255)
gcCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..gggggggggg > 2:2994868/1‑94 (MQ=255)
cGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..GGgggcgctgcc < 1:1590883/101‑7 (MQ=255)
cGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..GGgggcgctgcc < 2:2242895/101‑7 (MQ=255)
gATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGc.cc > 2:3423477/1‑101 (MQ=255)
gATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.C..GGgggcgcgcgcc > 2:39902/1‑94 (MQ=255)
tCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGc.cccc > 1:1405025/1‑101 (MQ=255)
tCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGc.cccc > 2:1801717/1‑101 (MQ=255)
tCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.CGGGGGCGCTGc.cccc < 1:1058664/101‑1 (MQ=255)
tCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.CGGGGGCGCTGc.cccc < 2:1705952/101‑1 (MQ=255)
cTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCg > 2:2533287/1‑101 (MQ=255)
cTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCg > 1:2379256/1‑101 (MQ=255)
cTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.CGGGGGCGCTGC.CCCCg < 2:2465617/101‑1 (MQ=255)
tAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.CGGGGGCGCTGC.CCCCgg < 1:1350096/101‑1 (MQ=255)
tGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGAcc > 1:1297425/1‑101 (MQ=255)
tGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.CGGGGGCGCTGC.CCCCGGAcc < 2:4208403/101‑1 (MQ=255)
gACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.CGGGGGCGCTGC.CCCCGGAccc < 1:2792734/101‑1 (MQ=255)
aCCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.CGGGGGCGCTGC.CCCCGGAcccc < 1:206580/101‑1 (MQ=255)
ccGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGAccccc < 1:3552908/101‑1 (MQ=38)
ccGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGAccccc < 2:3831136/101‑1 (MQ=38)
gagaTGGGTCAGGTGAAGCGCCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCgg < 1:4086549/101‑1 (MQ=38)
gagaTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGGGCTGC.CCCCCGACCCCCgg > 1:3321387/1‑101 (MQ=255)
gagaTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCgg > 2:3362928/1‑101 (MQ=38)
agaTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCggg > 2:606764/1‑101 (MQ=38)
agaTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCggg > 1:2673428/1‑101 (MQ=38)
gaTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGa < 2:2687348/101‑1 (MQ=38)
aTGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGat < 1:2600575/101‑1 (MQ=38)
tGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGata > 2:433168/1‑101 (MQ=38)
tGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGata < 1:2995090/101‑1 (MQ=38)
ggTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATAtt > 2:412672/1‑101 (MQ=38)
ggTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATAtt < 2:2409563/101‑1 (MQ=38)
ggTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATAtt > 1:1922993/1‑101 (MQ=38)
tCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTtg < 2:2700743/101‑1 (MQ=37)
cAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTtgt < 2:2859474/101‑1 (MQ=37)
ggTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTgg < 2:1081468/101‑1 (MQ=37)
gTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGc < 1:1874437/101‑1 (MQ=37)
tGAAGCCCCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCa < 2:4104028/101‑1 (MQ=25)
tGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCa < 1:216122/101‑1 (MQ=37)
tGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCa < 1:2633094/101‑1 (MQ=37)
tGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCa < 1:3803313/101‑1 (MQ=37)
aaGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAg < 2:74983/101‑1 (MQ=25)
aaGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAg < 2:259871/101‑1 (MQ=25)
aaGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAg < 2:571198/101‑1 (MQ=25)
aGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGa < 1:852365/101‑1 (MQ=25)
aGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGa < 2:373735/101‑1 (MQ=25)
gCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGAt < 1:3454090/101‑1 (MQ=25)
aCCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCACGATGa > 2:531327/1‑101 (MQ=25)
aCCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGa > 2:1918427/1‑101 (MQ=25)
cGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAAc < 2:1277562/101‑1 (MQ=25)
gTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGACGG..GGGGGGTGCACCCCGGCCCCCCGGATAATTTGTGGCaaaagaaaaa > 1:4092268/1‑93 (MQ=255)
tCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACaga < 1:2886273/101‑1 (MQ=25)
tCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACaga < 1:750155/101‑1 (MQ=25)
cGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGc < 2:3556104/101‑1 (MQ=25)
cGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCC.CGGGGGGGCGGC.CCCCGGCCCCCCGGGGAATTTTTGGCAAAAGGaaaagaag > 1:3785806/1‑96 (MQ=255)
gggCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGGGCTGC.CCCCGGGCCCCCCGGATATTTGTGGGAAGATGAAACagaggg > 1:3469470/1‑99 (MQ=25)
ggcaggcaTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGGGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.Gt > 2:1938589/1‑101 (MQ=25)
caggcaTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTa < 2:114596/101‑1 (MQ=25)
ggcaTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAgg < 1:1164002/101‑1 (MQ=25)
aTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGGGCTGC.CCCCGGACCCCCCGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGAt > 2:1001901/1‑101 (MQ=25)
aTCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCCGACCCCCGGGATATTTGTGGCAAGATGAAAAAGAGC.CGTAggggt > 2:1149381/1‑99 (MQ=18)
aGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTgg < 2:883780/101‑1 (MQ=25)
nnnnnnnnnnggggTCGNGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGt < 2:617117/91‑1 (MQ=18)
ggCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTa < 1:169210/101‑1 (MQ=25)
ggCCAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.CGGGGGGGCCGC.CCCCCGGCCCCCCGGGGATTTGTGGCCAGAAGAAACAGAGC.GGTAGGGGttttgga > 1:413487/1‑97 (MQ=255)
gCCAGCCGGGGGTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTaa < 2:1959642/101‑1 (MQ=25)
cAGCCGGGGGTCGAGTTCTGATCTC.AAGGC.CGGGGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAAcc > 2:3168301/1‑101 (MQ=25)
gggggTCGAGTTCTGATCTC.AAGGC.CGGGGGGGCTGC.CCCCGGGCCCCCCGGGTATTTGTGGGAAGATGAAACAGAGC.GTTAGGGGTTTGGGAACCATGAt > 1:474814/1‑101 (MQ=21)
ggggTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATc < 2:830607/101‑1 (MQ=25)
gggTCGAGTTCTGATCTC.AAGGC.CGGGGGGGGCGC.CCCCCGGCCCCCCGGGTATTTTTGGGAAGATGAAAAAGAGCGGTTGGGGATTTGG.AAACATGAttg > 2:1770582/1‑99 (MQ=255)
ggTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCgg < 2:3728632/101‑1 (MQ=25)
gTCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCggg < 1:1039616/101‑1 (MQ=25)
tCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGc < 2:3709666/101‑1 (MQ=25)
tCGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGc < 1:3043531/101‑1 (MQ=25)
cGAGTTCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCa < 1:606828/101‑1 (MQ=25)
cGAGTTCTGATCTC.AAGGC.CGGGGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCa > 2:4170324/1‑101 (MQ=25)
gAGTTCTGATCTC.AAGGC.CGGGGGGGCCGC.CCCCCGGCCCCCCGGGTATTTTTGGGAAGATGAAAAAGAGG.GGTAGGGGGTTTGGAAACATGATCGGGGaa > 1:3717245/1‑101 (MQ=255)
aGTTCTGATCTC.AAGGC.CGGGGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAg > 2:2844692/1‑101 (MQ=25)
ttCTGATCTCGATGCC.GG.GGGCGCTGC.CCCAGGACACCAGGGCTATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATTGGGCAAGCt < 2:1669894/101‑1 (MQ=21)
ttCTGATCTCAAGGCCGG..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCt < 2:1308789/101‑1 (MQ=25)
tcaaggccgggggCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAacac < 1:2756402/91‑1 (MQ=255)
caaggccgggggCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACg > 2:739926/10‑101 (MQ=255)
aggccgggggCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGt < 1:1338851/94‑1 (MQ=255)
aggccgggggCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGt < 1:433225/94‑1 (MQ=255)
aggccgggggCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGt < 2:1555484/94‑1 (MQ=255)
ccgggggCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACa < 1:887848/97‑1 (MQ=255)
gggggCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACagg > 1:2604407/3‑101 (MQ=255)
ggggCGCTGC.CCCCGAACCCCAAGGATATTTGTGGCAAGATGAAGCAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACTCGGTACaggg < 2:3928770/100‑1 (MQ=38)
gggCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACaggga > 1:2697328/1‑101 (MQ=255)
gggCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACaggga < 2:3047919/101‑1 (MQ=255)
||||
ATCGAGGCGGCCGATCTAGTGACCGAGATGGGTCAGGTGAAGCACCCGTTCCGGGCAGGCATCAAGGGCCAGCCGGGGGTCGAGTTCTGATCTCAAAGGC.C..GGGCGCTGC.CCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGC.GTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACAGGGA > NC_014034/2209579‑2209780
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 28 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|