BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,420,016	Δ1 bp	1.7%	coding (309/1644 nt)	RCAP_rcc01323 ←	IS66 family transposase

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,420,016	0	C→.	1.7%	3.8 ‑0.5 ‑0.0	237	coding (309/1644 nt)	RCAP_rcc01323	IS66 family transposase
Reads supporting (aligned to +/- strand): new base (3/1): ref base (131/102): total (134/103)
Fisher's exact test strand distribution p-value = 6.35e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.96e-01

Only 100 of 309 total aligned reads displayed.


CCCCGCAGGAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCAGAAAGTCTGAT  >  NC_014034/1419916‑1420116


   cGCAGGAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTTTGctcc                                                                                                   >  1:1958739/1‑101 (MQ=255)


   cGCAGGAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcc                                                                                                   >  2:2563686/1‑101 (MQ=255)


    gCAGGAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcct                                                                                                  >  1:657218/1‑101 (MQ=255)


      aGGAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcc                                                                                                >  2:2745061/1‑101 (MQ=255)


      aGGAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcc                                                                                                <  1:139224/101‑1 (MQ=255)


      aGGAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcc                                                                                                <  1:1643636/101‑1 (MQ=255)


      aGGAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcc                                                                                                >  2:2449674/1‑101 (MQ=255)


       ggAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcct                                                                                               <  1:77590/101‑1 (MQ=255)


        tcttccgatctttCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctc                                                                                              <  2:3289796/91‑1 (MQ=255)


        gAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctc                                                                                              >  2:4540803/1‑101 (MQ=255)


         aGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcc                                                                                             >  1:4251594/1‑101 (MQ=255)


          gCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcct                                                                                            >  1:3402439/1‑101 (MQ=255)


           cAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctc                                                                                           >  1:1667687/1‑101 (MQ=255)


           cAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctc                                                                                           >  1:956903/1‑101 (MQ=255)


           cAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctc                                                                                           <  2:3351836/101‑1 (MQ=255)


            aGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctcc                                                                                          >  2:4413480/1‑101 (MQ=255)


            aGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctcc                                                                                          >  2:2796282/1‑101 (MQ=255)


            aGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctcc                                                                                          >  2:2940747/1‑101 (MQ=255)


             gTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctcct                                                                                         <  1:4440246/101‑1 (MQ=255)


              tGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctcctc                                                                                        >  1:3296366/1‑101 (MQ=255)


                cGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctcctcct                                                                                      <  1:810085/101‑1 (MQ=255)


                 gTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctcctcctc                                                                                     <  2:1605807/101‑1 (MQ=255)


                 gTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctcctcctc                                                                                     >  1:2570387/1‑101 (MQ=255)


                   ttCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTgctcctcctcct.ctcctcctc                                                                                  >  2:3776397/1‑101 (MQ=255)


                    tCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTGTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGctcctcctcctcctcctcctc                                                                                  <  2:2904450/101‑1 (MQ=255)


                      cTCGGGGAAATGCTTGTACACCTCGGTCTTGATGATCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGa                                                                                >  2:4514277/1‑101 (MQ=255)


                        cGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACa                                                                              <  1:3650051/101‑1 (MQ=255)


                         ggggAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAt                                                                             >  1:1226363/1‑101 (MQ=255)


                         ggggAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAt                                                                             >  1:1179032/1‑101 (MQ=255)


                          gggAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtc                                                                            <  1:2936959/101‑1 (MQ=255)


                          gggAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtc                                                                            >  2:3574303/1‑101 (MQ=255)


                           ggAAATGCTTGTACTCCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtcg                                                                           <  2:702613/101‑1 (MQ=255)


                           ggAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtcg                                                                           >  1:420107/1‑101 (MQ=255)


                           ggAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtcg                                                                           <  2:4217254/101‑1 (MQ=255)


                            gAAATGCTTGTACACCTCGGTCTTTATGTTCTTTGGTTGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtcgt                                                                          <  1:3244742/101‑1 (MQ=255)


                              aaTGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtcgtcg                                                                        >  2:2991263/1‑101 (MQ=255)


                              aaTGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtcgtcg                                                                        >  2:1460647/1‑101 (MQ=255)


                               aTGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtcgtcgt                                                                       <  1:2128534/101‑1 (MQ=255)


                               aTGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtcgtcgt                                                                       >  1:619777/1‑101 (MQ=255)


                                tGCTTGTACGCCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACAtcgtcgtc                                                                      <  1:2289223/101‑1 (MQ=255)


                                    tGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGc                                                                  >  1:396108/1‑101 (MQ=255)


                                     gTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCa                                                                 >  2:1351467/1‑101 (MQ=255)


                                      tACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCAc                                                                >  2:3387767/1‑101 (MQ=255)


                                          ccTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCa                                                            >  2:582931/1‑101 (MQ=255)


                                           cTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCAt                                                           >  1:1124796/1‑101 (MQ=255)


                                             cGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATcc                                                         >  2:203826/1‑101 (MQ=255)


                                              ggTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCt                                                        <  1:2501974/101‑1 (MQ=255)


                                              ggTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCt                                                        >  2:1102562/1‑101 (MQ=255)


                                              ggTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCt                                                        >  2:2204179/1‑101 (MQ=255)


                                               gTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtc                                                       <  1:2775843/101‑1 (MQ=255)


                                               gTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtc                                                       >  1:3001250/1‑101 (MQ=255)


                                               gTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtc                                                       <  2:123648/101‑1 (MQ=255)


                                                tCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtcg                                                      <  2:951492/101‑1 (MQ=255)


                                                tCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtcg                                                      <  2:3898708/101‑1 (MQ=255)


                                                tCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtcg                                                      >  1:2607243/1‑101 (MQ=255)


                                                 cTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtcgt                                                     >  1:2043823/1‑101 (MQ=255)


                                                  ttGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtcgtc                                                    >  1:3693790/1‑101 (MQ=255)


                                                  ttGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtcgtc                                                    >  2:1692459/1‑101 (MQ=255)


                                                   tGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtcgtcg                                                   >  2:1564705/1‑101 (MQ=255)


                                                     aTGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtcgtcgtc                                                 >  2:2847449/1‑101 (MQ=255)


                                                      tGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCtcgtcgtcg                                                <  1:3519902/101‑1 (MQ=255)


                                                       gTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTcgtcgtcgt                                               >  1:980227/1‑101 (MQ=255)


                                                        ttCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCgtcgtcgtc                                              >  2:3513397/1‑101 (MQ=255)


                                                        ttCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCgtcgtcgtc                                              <  1:2674301/101‑1 (MQ=255)


                                                        ttCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCgtcgtcgtc                                              >  1:1786578/1‑101 (MQ=255)


                                                         tCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTcc                                             <  1:4526779/101‑1 (MQ=255)


                                                         tCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTcc                                             <  2:3085033/101‑1 (MQ=255)


                                                         tCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTcc                                             <  1:2844855/101‑1 (MQ=255)


                                                         tCTTTGGTCGCTTCTGTTTCTGCTTCCCTTGCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTcc                                             >  1:4150791/1‑101 (MQ=255)


                                                          cTTGGGTCATTTCTGTTTCGGCTTCCCTTGCCGGGGCTTCTGCTCCTCTTCCTCTTCCTCCTCGGCATCTTCCTCGGCCACGTCTTCCTCgtccccgtcag                                            >  2:4578329/1‑99 (MQ=255)


                                                           tttGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGTCCTCCTGCTCCTCCTCCTCCTCCACCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGc                                           <  1:3991374/101‑1 (MQ=255)


                                                           tttGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGc                                           >  1:4553410/1‑101 (MQ=255)


                                                            ttGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCt                                          >  2:4344067/1‑101 (MQ=255)


                                                             tGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTc                                         >  2:517580/1‑101 (MQ=255)


                                                                tCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCa                                      <  1:4054786/101‑1 (MQ=255)


                                                                     tCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGaaa                                 <  1:1981683/101‑1 (MQ=255)


                                                                      ttGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAAt                                <  2:4013203/100‑1 (MQ=255)


                                                                        gTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAAttg                              >  2:4124474/1‑101 (MQ=255)


                                                                         tttCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAAttgt                             >  2:1178165/1‑101 (MQ=255)


                                                                          ttCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAAttgtt                            >  2:1886991/1‑101 (MQ=255)


                                                                           tCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAAttgttg                           <  1:528354/101‑1 (MQ=255)


                                                                           tCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAAttgttg                           >  1:2726475/1‑101 (MQ=255)


                                                                           tCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGGCCGCTCCCAGGAAAttgttg                           >  1:2204301/1‑101 (MQ=255)


                                                                            cTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATtgttgt                          >  2:3637493/1‑101 (MQ=255)


                                                                             tGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGCAATTGTTGTc                         >  2:2682374/1‑101 (MQ=255)


                                                                               cTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCgg                       >  1:3803227/1‑101 (MQ=255)


                                                                               cTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCgg                       <  1:4301577/101‑1 (MQ=255)


                                                                                ttCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGa                      <  1:1241428/101‑1 (MQ=255)


                                                                                    cTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTg                  >  1:710598/1‑101 (MQ=255)


                                                                                      ttCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGcc                >  1:3508496/1‑101 (MQ=255)


                                                                                         cGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCa             >  2:450182/1‑101 (MQ=255)


                                                                                             gCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCAGaaa         <  1:3062158/101‑1 (MQ=255)


                                                                                             gCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCAGaaa         <  2:1807968/101‑1 (MQ=255)


                                                                                             gCTTCTGCCCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCCCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCAGaaa         <  1:4508003/101‑1 (MQ=255)


                                                                                              cTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCAGAAAg        <  2:762356/101‑1 (MQ=255)


                                                                                               ttCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCAGAAAgc       >  1:1196048/1‑100 (MQ=255)


                                                                                               ttCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCAGAAAGt       <  1:572492/101‑1 (MQ=255)


                                                                                               ttCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCAGAAAGt       >  2:3057945/1‑101 (MQ=255)


                                                                                                tCTGCTCCTCCTCCTCCTCCTCCACGACATCGTCGTGGGGCACGTCATCCTCGTCGTCCTCTGCTCCCAGAAAATTGTTGTCGCAGCTGCAGAAAAAAgga      >  2:2657371/1‑99 (MQ=255)


                                                                                                tCTGCCCCCCCCCCT.CTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCAGAAAGTCt     <  1:3776672/101‑1 (MQ=255)


CCCCGCAGGAGCAGTGCGTTTCCTCGGGGAAATGCTTGTACACCTCGGTCTTGATGTTCTTTGGTCGCTTCTGTTTCTGCTTCCCTTTCCGGGGCTTCTGCTCCTCCTCCTCCTCCTCCTCGACATCGTCGTCGGGCACGTCATCCTCGTCGTCGTCCGCTCCCAGGAAATTGTTGTCGGAGCTGCCGCAGAAAGTCTGAT  >  NC_014034/1419916‑1420116

Base quality scores:


ATCG

< 3 ≤


ATCG

< 22 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG