| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,734,855 | Δ1 bp | 4.1% | intergenic (‑108/+85) | RCAP_rcc01603 ← / ← RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,734,855 | 0 | G→. | 4.1% | 15.5 ‑0.8 0.0 | 196 | intergenic (‑108/+85) | RCAP_rcc01603/RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/3): ref base (84/104): total (89/107) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.72e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 203 total aligned reads displayed.
CCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTG.CCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGAC > NC_014034/1734756‑1734954
|
ggggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGAc > 2:1021212/1‑101 (MQ=255)
ggggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGAc < 2:4610887/101‑1 (MQ=255)
ggggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGAc < 2:2230495/101‑1 (MQ=255)
gAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTcc > 1:410136/1‑101 (MQ=255)
aaTGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTccc < 2:4511714/101‑1 (MQ=255)
tGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTccccc > 2:1207352/1‑101 (MQ=255)
ggCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTcccccc > 1:2553774/1‑101 (MQ=255)
ggCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTcccccc < 2:4404005/101‑1 (MQ=255)
gcgcCTCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCg < 1:3933111/101‑1 (MQ=255)
cgcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCgg > 1:1070417/1‑101 (MQ=255)
gcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCggg < 2:3905654/101‑1 (MQ=255)
cATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCCGGa > 2:422033/1‑101 (MQ=255)
aTCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGat > 2:910333/1‑101 (MQ=255)
ccTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGatat > 1:808884/1‑101 (MQ=255)
ccTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGatat < 1:2148178/101‑1 (MQ=255)
tAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATAttt > 2:197665/1‑101 (MQ=255)
caggcgcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCCTCCGCCGGCGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATAttt < 2:616689/96‑1 (MQ=18)
gcagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTAt < 1:2365798/101‑1 (MQ=255)
gcagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTAt > 1:416197/1‑101 (MQ=255)
cagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATg < 1:4425695/101‑1 (MQ=255)
cagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATg < 2:779069/101‑1 (MQ=255)
cagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATg > 2:3530466/1‑101 (MQ=255)
agcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATgg < 2:1078495/101‑1 (MQ=255)
agcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATgg < 1:117366/101‑1 (MQ=255)
gcCGGGGCGGGCAAGCCAAGGGCTGACGCTGGGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGc < 1:2462901/101‑1 (MQ=21)
gcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGc < 2:1882044/101‑1 (MQ=255)
cGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.aa < 2:1629925/101‑1 (MQ=255)
gggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.a < 1:2419850/101‑1 (MQ=255)
gggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.a < 1:1627934/101‑1 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGG.AAG.At > 1:1163249/1‑101 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTG.CCCTCCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.At < 2:752858/101‑1 (MQ=255)
gcgggcTAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATg < 1:765635/101‑1 (MQ=255)
gggcAAGCCAAAGGCTGTCGGTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGaa < 1:1971221/101‑1 (MQ=18)
gggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGaa < 1:3776779/101‑1 (MQ=255)
gggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGaa < 1:3516714/101‑1 (MQ=255)
gggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGaa > 2:1971383/1‑101 (MQ=255)
ggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGaaa < 1:3150948/101‑1 (MQ=255)
ggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGaaa > 2:681505/1‑101 (MQ=255)
aaGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTg > 2:3435053/1‑101 (MQ=255)
aGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATTTTTATGGC.AAG.ATGAAACTGc < 1:2644089/101‑1 (MQ=255)
gCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCATGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.g < 1:1763434/101‑1 (MQ=255)
gCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.g < 1:1580250/101‑1 (MQ=255)
ccAATGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.gg < 2:2930853/101‑1 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGcc > 2:2059384/1‑101 (MQ=255)
ggCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCCGGGCAATTATGGC.AAGAATAAAATGGC.GGCCtc > 1:5823/1‑100 (MQ=17)
gCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCa < 1:2282492/101‑1 (MQ=255)
cTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCAt < 2:2530820/101‑1 (MQ=255)
tGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCCTCAtt > 1:40369/1‑100 (MQ=255)
gcGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCtt < 2:3512624/100‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.TTGAAACTGC.GGCCTTCATCtt < 2:4459524/101‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCtt < 1:971746/101‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCtt < 2:3722210/101‑1 (MQ=255)
cGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTg > 1:712115/1‑101 (MQ=255)
cGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTg < 2:2338294/101‑1 (MQ=255)
gCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGc < 1:3065265/101‑1 (MQ=255)
gCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGc < 2:1366481/101‑1 (MQ=255)
cTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGcc > 1:662959/1‑101 (MQ=255)
tGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCTGGATTTTTATGGCTAAC.AGAAAACTCC.GCCCTTCACCtcaca > 1:3283882/1‑97 (MQ=9)
gCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCAt < 1:1548212/101‑1 (MQ=255)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGTGAAATTTATGGC.AAG.ATGAAACTGC.GACCTTCATCTTGCCATa > 1:436418/1‑101 (MQ=17)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATa < 2:3397376/101‑1 (MQ=255)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATa > 1:474469/1‑101 (MQ=255)
gTCAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATaa > 2:1097034/1‑101 (MQ=255)
cAGCCGTCGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAat < 2:3681062/101‑1 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAat < 1:3849642/101‑1 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAat < 2:4051915/101‑1 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAata > 2:1428254/1‑101 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAata > 2:2922739/1‑101 (MQ=255)
gACGGGCCGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTCCATCTTGCCATAAATATccc > 1:295962/1‑101 (MQ=255)
gcgggccgggcAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.g < 2:557275/100‑1 (MQ=255)
aCGGGCAGGGCAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.g < 1:1657182/101‑1 (MQ=255)
cgggccgggcAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.gg > 1:2105841/1‑101 (MQ=255)
ggccgggcAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATACC.gggg > 2:1448584/1‑101 (MQ=255)
tgacggacggggggCTCTG.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGC.AAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTg > 1:2761741/9‑101 (MQ=2)
tgacggacggggggCTCTG.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGC.AAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTg > 2:18019/9‑101 (MQ=2)
gccgggcAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 2:3253867/101‑1 (MQ=255)
gccgggcAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 2:416160/101‑1 (MQ=255)
ccgggcAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGG.AAG.ATGAAACTGC.GGGCTTCATCTTGCCCTAAATATCCC.cggggg > 1:1745823/1‑99 (MQ=14)
ccgggcAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg < 2:3784874/101‑1 (MQ=255)
ccgggcAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg < 1:1378546/101‑1 (MQ=255)
acggacggggggCTCTG.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGC.AAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa > 2:4309734/7‑99 (MQ=2)
acggacggggggCTCTG.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGC.AAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa > 1:4440965/7‑99 (MQ=2)
acggacggggggCTCTG.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGC.AAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa > 2:923127/7‑99 (MQ=2)
ggggAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg < 2:3648148/101‑1 (MQ=255)
gcAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCggg < 2:3891332/101‑1 (MQ=255)
gacggggggCGCTG.CCC.CCCGGCTTCG..CTCCCCCCGGGATATTTGCGGC.AAG.ATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaattg < 1:3012753/98‑6 (MQ=9)
cAGGGGGGCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCgggg > 1:4273313/1‑101 (MQ=255)
ggggggCGCTGCCCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCa < 2:1070328/101‑1 (MQ=255)
cctccccc.ccGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAACCTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGcccc < 1:2334251/96‑1 (MQ=255)
ctgcccc.ccGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCg < 1:1207444/97‑1 (MQ=255)
tgcccc.ccGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.GTGAAAATGC.GGCCTTCATCTTTCCATAAATATCCC.GGGGTGCGGGGGAGAGCCCCGc > 1:1105222/4‑101 (MQ=18)
gcccc.ccGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCt < 1:1021295/99‑1 (MQ=255)
cc.ccGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCaa > 2:4560387/1‑101 (MQ=255)
c.ccGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAc > 2:159375/1‑101 (MQ=255)
ccGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAcc > 1:3580067/1‑101 (MQ=255)
ccTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAg > 2:2004868/1‑101 (MQ=255)
cTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGa > 2:2702641/1‑101 (MQ=255)
cTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGa < 1:1192006/101‑1 (MQ=255)
tGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGAt < 2:2105691/101‑1 (MQ=255)
tGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGAt < 2:1745704/101‑1 (MQ=255)
|
CCGGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTG.CCC.CCGTCCTGCGGACTCCCCCCGGGATATTTATGGC.AAG.ATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGAC > NC_014034/1734756‑1734954
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|