| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,734,856 | Δ1 bp | 4.1% | intergenic (‑109/+84) | RCAP_rcc01603 ← / ← RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,734,856 | 0 | A→. | 4.1% | 15.5 ‑0.7 ‑0.1 | 197 | intergenic (‑109/+84) | RCAP_rcc01603/RCAP_rcc01604 | hemolysin‑III family protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (5/3): ref base (85/102): total (90/107) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.75e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.37e-01 | ||||||||||
Only 100 of 204 total aligned reads displayed.
GGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAA > NC_014034/1734758‑1734956
|
ggggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGAc < 2:4610887/101‑1 (MQ=255)
ggggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGAc < 2:2230495/101‑1 (MQ=255)
gggAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACt > 1:2346611/1‑101 (MQ=255)
aaTGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.ccc < 2:4511714/101‑1 (MQ=255)
tGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.ccccc > 2:1207352/1‑101 (MQ=255)
ggCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.cccccc < 2:4404005/101‑1 (MQ=255)
gcgcCTCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCg < 1:3933111/101‑1 (MQ=255)
cgcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCgg > 1:1070417/1‑101 (MQ=255)
gcATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCggg < 2:3905654/101‑1 (MQ=255)
cATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCCGGa > 2:422033/1‑101 (MQ=255)
aTCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGat > 2:910333/1‑101 (MQ=255)
tCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGata < 1:3574375/101‑1 (MQ=255)
tCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGata > 1:80430/1‑101 (MQ=255)
tAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGGTAttt > 2:3520758/1‑101 (MQ=255)
tAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATAttt > 2:197665/1‑101 (MQ=255)
tAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATAttt < 2:3580478/101‑1 (MQ=255)
caggcgcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCCTCCGCCGGCGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATAttt < 2:616689/96‑1 (MQ=18)
cagcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATg < 2:779069/101‑1 (MQ=255)
agcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATgg < 1:117366/101‑1 (MQ=255)
agcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATgg < 2:1078495/101‑1 (MQ=255)
gcCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGc < 2:1882044/101‑1 (MQ=255)
cGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCaa < 2:1629925/101‑1 (MQ=255)
ggggCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAg > 1:2277184/1‑101 (MQ=255)
ggggCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAg > 1:4111430/1‑101 (MQ=255)
gggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGa < 1:2761632/101‑1 (MQ=255)
gggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGa < 1:1627934/101‑1 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGGAAGAt > 1:1163249/1‑101 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGAt > 1:4334206/1‑101 (MQ=255)
ggcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCCTCCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGAt < 2:752858/101‑1 (MQ=255)
gcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATg < 1:3516638/101‑1 (MQ=255)
gcgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCCGGCTATTTTTTGGAAGATg > 1:56399/1‑101 (MQ=21)
cgggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGa < 1:2511831/101‑1 (MQ=255)
gggcAAGCCAAAGGCTGTCGGTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGaa < 1:1971221/101‑1 (MQ=18)
gggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGaa > 2:1971383/1‑101 (MQ=255)
ggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGaaa < 1:3150948/101‑1 (MQ=255)
ggcAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGaaa > 2:681505/1‑101 (MQ=255)
aGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGc < 1:3790451/101‑1 (MQ=255)
gCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCATGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.g < 1:1763434/101‑1 (MQ=255)
gCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.g < 1:1580250/101‑1 (MQ=255)
ccAATGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.gg < 2:2930853/101‑1 (MQ=255)
ccAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.gg > 1:66097/1‑101 (MQ=255)
aaaGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGcc > 1:4395081/1‑101 (MQ=255)
cTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCAt < 2:2530820/101‑1 (MQ=255)
tGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACTCCCCCCCGGGAAATTTTTGGCAAAAAGAAAACGC.GGCCTTCAt > 1:2399213/1‑101 (MQ=17)
gACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCt < 1:732751/101‑1 (MQ=255)
gACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAAAAGAAACTGC.GGGCTTCATCt > 1:2616302/1‑101 (MQ=18)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCTCC.CCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCtt < 1:3938117/101‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGTTGAAACTGC.GGCCTTCATCtt < 2:4459524/101‑1 (MQ=255)
aCGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCtt < 2:3722210/101‑1 (MQ=255)
cGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTg < 2:2338294/101‑1 (MQ=255)
cGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTg < 1:4629208/101‑1 (MQ=255)
gCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGc < 2:1366481/101‑1 (MQ=255)
gCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGc < 1:3065265/101‑1 (MQ=255)
gCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCAt < 1:1548212/101‑1 (MQ=255)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATa > 1:2294734/1‑101 (MQ=255)
cGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATa < 2:3397376/101‑1 (MQ=255)
gTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATaa > 2:1097034/1‑101 (MQ=255)
gTCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATaa < 1:4223937/101‑1 (MQ=255)
tCAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATaaa > 1:3719863/1‑101 (MQ=255)
cAGCCGTCGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAat < 2:3681062/101‑1 (MQ=255)
cAGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAat < 2:4051915/101‑1 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAata > 2:1428254/1‑101 (MQ=255)
aGCCGACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAata > 2:2922739/1‑101 (MQ=255)
gACGGGCCGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTCCATCTTGCCATAAATATccc > 1:295962/1‑101 (MQ=255)
gcgggccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.g < 2:557275/100‑1 (MQ=255)
aCGGGCAGGGCAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.g < 1:1657182/101‑1 (MQ=255)
gggccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATTCC.ggg > 2:35097/1‑101 (MQ=255)
ggccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATACC.gggg > 2:1448584/1‑101 (MQ=255)
tgacggacggggggCTCT.G.CCC.CCCGGCTTCG..CT.CCCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTg > 2:18019/9‑101 (MQ=2)
gccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 2:3253867/101‑1 (MQ=255)
gccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 2:416160/101‑1 (MQ=255)
gccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 1:848624/101‑1 (MQ=255)
gccgggcAGGAGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt < 2:2077344/101‑1 (MQ=255)
ccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGGAAGATGAAACTGC.GGGCTTCATCTTGCCCTAAATATCCC.cggggg > 1:1745823/1‑99 (MQ=14)
ccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg < 1:1378546/101‑1 (MQ=255)
ccgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg < 2:3784874/101‑1 (MQ=255)
cgggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGc > 1:663736/1‑101 (MQ=255)
acggacggggggCTCT.G.CCC.CCCGGCTTCG..CT.CCCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa > 2:4309734/7‑99 (MQ=2)
acggacggggggCTCT.G.CCC.CCCGGCTTCG..CT.CCCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa > 2:923127/7‑99 (MQ=2)
ggggAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg < 2:3648148/101‑1 (MQ=255)
gggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg > 2:2106101/1‑101 (MQ=255)
gggcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg < 1:3864913/101‑1 (MQ=255)
gcAGGGGGGCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCggg < 2:3891332/101‑1 (MQ=255)
gacggggggCGCT.G.CCC.CCCGGCTTCG..CT.CCCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaattg < 1:3012753/98‑6 (MQ=9)
ggggggCGCT.GCCCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCa < 2:1070328/101‑1 (MQ=255)
ctgcccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCg < 1:1207444/97‑1 (MQ=255)
tgcccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGGTGAAAATGC.GGCCTTCATCTTTCCATAAATATCCC.GGGGTGCGGGGGAGAGCCCCGc > 1:1105222/4‑101 (MQ=18)
tgcccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGc > 1:4439373/4‑101 (MQ=255)
gcccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCt < 1:1021295/99‑1 (MQ=255)
cccc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTc > 1:2136297/2‑101 (MQ=255)
cc.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCaa > 2:4560387/1‑101 (MQ=255)
cc.ccGGCCTGCGGGCT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCaa < 1:2431716/101‑1 (MQ=255)
c.ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAc > 2:159375/1‑101 (MQ=255)
ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAAcc < 1:4078692/101‑1 (MQ=255)
ccGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGGGCGGGGCAGAGCCCCGCTCAAcc > 2:1020723/1‑101 (MQ=255)
ccTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAg > 2:2004868/1‑101 (MQ=255)
cTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGa > 2:2702641/1‑101 (MQ=255)
cTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGa < 1:1192006/101‑1 (MQ=255)
tGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGAt < 2:1745704/101‑1 (MQ=255)
aCT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACaa < 1:2077801/101‑1 (MQ=255)
|
GGGGAATGGCGCATCCTAGCAGCCGGGGCGGGCAAGCCAAAGGCTGACGCTGCGTCAGCCGACGGGCCGGGCAGGGGGGCGCT.G.CCC.CCGTCCTGCGGACT.CCCCCCGGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGAGCCCCGCTCAACCGAAGATGACAA > NC_014034/1734758‑1734956
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|