BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,040,448	Δ1 bp	100%	intergenic (‑196/‑192)	RCAP_rcc01888 ← / → RCAP_rcc01889	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,040,448	0	C→.	100.0%	858.4	193	intergenic (‑196/‑192)	RCAP_rcc01888/RCAP_rcc01889	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): new base (86/107): ref base (0/0): total (86/107)

Only 100 of 219 total aligned reads displayed.


GAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGG.C.GCGCC..ATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGAGTCGCGCCA  >  NC_014034/2040348‑2040545


 aaGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCAcc                                                                                                  >  1:1887946/1‑101 (MQ=255)


 aaGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCAcc                                                                                                  >  2:2056093/1‑101 (MQ=255)


  aGGTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCAccg                                                                                                 <  1:2765255/101‑2 (MQ=255)


   ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATTGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCAccgg                                                                                                <  1:4021196/101‑3 (MQ=255)


   ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCAccgg                                                                                                <  1:2392898/101‑3 (MQ=255)


   ggTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCAccgg                                                                                                <  1:1706514/101‑3 (MQ=255)


    gTCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCAccggt                                                                                               <  2:182099/101‑4 (MQ=255)


     tCAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCAccggtt                                                                                              <  2:4129906/101‑5 (MQ=255)


      cAGACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTc                                                                                            <  1:1031136/101‑1 (MQ=255)


        gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCgg                                                                                          >  2:3429405/1‑101 (MQ=255)


        gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCgg                                                                                          <  1:3366920/101‑1 (MQ=255)


        gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCgg                                                                                          <  1:1539205/101‑1 (MQ=255)


        gACGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCgg                                                                                          >  1:1591345/1‑101 (MQ=255)


         aCGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGa                                                                                         <  2:3671284/101‑1 (MQ=255)


          cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAg                                                                                        <  1:1976423/101‑1 (MQ=255)


          cGTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAg                                                                                        <  2:4530675/101‑1 (MQ=255)


           gTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAgg                                                                                       >  1:692799/1‑101 (MQ=255)


           gTTGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGGGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAgg                                                                                       <  2:574212/101‑1 (MQ=255)


            ttGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAggt                                                                                      >  1:2956119/1‑100 (MQ=255)


            ttGTGCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGAGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAggt                                                                                      <  1:2307715/101‑2 (MQ=255)


             tgtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAggtt                                                                                     <  2:2985818/101‑3 (MQ=255)


              gtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAggttg                                                                                    <  2:3488367/101‑4 (MQ=255)


              gtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAggttg                                                                                    >  1:21309/1‑98 (MQ=255)


              gtgCAAAAGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAggttg                                                                                    <  2:3613391/101‑4 (MQ=255)


                   aaaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGAGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGAGGTTTgatgc                                                                               >  1:2288158/1‑97 (MQ=255)


                    aaggcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGc                                                                              >  1:2665182/7‑101 (MQ=255)


                    aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGNTTCGGA.GGTTGGATGCa                                                                             >  2:124206/1‑101 (MQ=255)


                    aaGCA.CCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCa                                                                             >  2:3845596/1‑101 (MQ=255)


                      agcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCAt                                                                            >  1:3158010/5‑101 (MQ=255)


                      agcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCAt                                                                            >  2:2125524/5‑101 (MQ=255)


                       gcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.TGTTGGATGCATa                                                                           <  1:2525796/98‑1 (MQ=255)


                       gcaccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATa                                                                           <  1:3944257/98‑1 (MQ=255)


                        caccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATaa                                                                          <  2:545894/99‑1 (MQ=255)


                        caccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATaa                                                                          <  1:4283886/99‑1 (MQ=255)


                         accGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATaaa                                                                         <  2:1071987/100‑1 (MQ=255)


                          ccGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTTGATGCATAAAt                                                                        <  2:2287996/101‑1 (MQ=255)


                               gCGGATGGCTTACGGGGTATGGCGCGTGCCAAAGACGGCGACCGCAAATG.CTGCGCC..ATAAGTGAGACCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCa                                                                   <  1:4647850/101‑1 (MQ=255)


                                cGGATGGCTTACGGGGGATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCAt                                                                  <  2:2507547/101‑1 (MQ=255)


                                cGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCAt                                                                  <  1:1132781/101‑1 (MQ=255)


                                 ggATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATg                                                                 <  2:241483/101‑1 (MQ=255)


                                 ggATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATg                                                                 >  2:1740068/1‑101 (MQ=255)


                                   aTGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGAt                                                               >  2:1552198/1‑101 (MQ=255)


                                    tGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATc                                                              >  1:3585651/1‑101 (MQ=255)


                                    tGGCGTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATc                                                              <  1:1772243/101‑1 (MQ=255)


                                     ggCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATcc                                                             >  1:2918528/1‑101 (MQ=255)


                                     ggCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATcc                                                             <  2:2565396/101‑1 (MQ=255)


                                      gCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCg                                                            >  1:387863/1‑101 (MQ=255)


                                       cTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGc                                                           <  1:3656642/101‑1 (MQ=255)


                                         tACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGccc                                                         >  2:2868759/1‑101 (MQ=255)


                                           cgcgGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGccctc                                                       <  2:2222038/101‑1 (MQ=255)


                                           cgcgGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGccctc                                                       >  2:4482168/1‑101 (MQ=255)


                                           cgcgGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGccctc                                                       >  1:4415415/1‑101 (MQ=255)


                                             cgGTATGGCGCGTGCCAAAGACGGCGG.CGCAAAAG.C.CCGCCCAAAAAGTGA.CCCAACCGGTT.GGGGGGTGGGTTGCTTAAATGGACATAATCGCccccccc                                                     >  1:1825742/1‑101 (MQ=255)


                                              ggTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGccctccct                                                    <  1:4192333/101‑1 (MQ=255)


                                               gTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTg                                                   >  2:2165888/1‑101 (MQ=255)


                                                 aTGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTc                                                 >  2:1093424/1‑101 (MQ=255)


                                                  tGGCGCGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCt                                                >  1:2041978/1‑101 (MQ=255)


                                                    gcgcGTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGa                                              <  1:2630954/101‑1 (MQ=255)


                                                     cgcgTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGCTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGaa                                             >  1:1330995/1‑101 (MQ=255)


                                                       cgTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAAtt                                           <  1:2427820/101‑1 (MQ=255)


                                                        gTGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTg                                          >  2:1606025/1‑101 (MQ=255)


                                                         tGCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGc                                         >  2:3546921/1‑101 (MQ=255)


                                                          gCCAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGcc                                        <  1:3813923/101‑1 (MQ=255)


                                                           ccAAAGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCg                                       <  2:2314115/101‑1 (MQ=255)


                                                             aaaGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGa                                     >  2:4425010/1‑101 (MQ=255)


                                                              aaGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGAt                                    >  1:1505191/1‑101 (MQ=255)


                                                              aaGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGAt                                    <  2:1433068/101‑1 (MQ=255)


                                                              aaGACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGAt                                    >  2:1046997/1‑101 (MQ=255)


                                                                gACGGCGGCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGc                                  <  1:3696110/101‑1 (MQ=255)


                                                                  cggcggCCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCgg                                <  1:1401438/101‑1 (MQ=255)


                                                                   ggcggcCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCggg                               >  2:1344462/1‑101 (MQ=255)


                                                                      ggcCGCAAAGGCC.GGCCC..ATAAGTGAGCCCA.CCGGTGCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCCGATCCGGGCaa                            <  2:3098209/101‑1 (MQ=255)


                                                                      ggcCGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCaa                            >  2:1676809/1‑101 (MQ=255)


                                                                        ccGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCaaaa                          <  2:872169/101‑1 (MQ=255)


                                                                         cGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAAt                         >  2:4669265/1‑101 (MQ=255)


                                                                         cGCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAAt                         <  1:3224654/101‑1 (MQ=255)


                                                                          gCAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATg                        <  1:960445/101‑1 (MQ=255)


                                                                           cAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGc                       >  2:2678026/1‑101 (MQ=255)


                                                                           cAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGc                       <  2:673355/101‑1 (MQ=255)


                                                                           cAAAGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGc                       <  2:4339384/101‑1 (MQ=255)


                                                                            aaaGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCa                      <  1:637827/101‑1 (MQ=255)


                                                                            aaaGGCC.GCGCC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCa                      <  1:1730661/101‑1 (MQ=255)


                                                                             aaggcc.gcgcC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCAc                     >  2:1418546/6‑101 (MQ=255)


                                                                             aaggcc.gcgcC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCAc                     >  2:4283422/6‑101 (MQ=255)


                                                                              aggcc.gcgcC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCAcg                    <  1:353288/97‑1 (MQ=255)


                                                                                 cc.gcgcC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCACAATGCACgcgc                 >  2:1994740/2‑101 (MQ=255)


                                                                                 cc.gcgcC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACgcgc                 <  2:4157614/100‑1 (MQ=255)


                                                                                 cc.gcgcC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACgcgc                 >  2:2114360/2‑101 (MQ=255)


                                                                                  c.gcgcC..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGcc                >  2:4320317/1‑101 (MQ=255)


                                                                                       cc..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCg            <  1:2249665/101‑1 (MQ=255)


                                                                                        c..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGa           >  1:235065/1‑101 (MQ=255)


                                                                                        c..ATAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGa           >  1:1214163/1‑101 (MQ=255)


                                                                                           aTAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGAg          >  1:4109869/1‑101 (MQ=255)


                                                                                           aTAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGAg          <  1:4328317/101‑1 (MQ=255)


                                                                                            tAAGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGAGt         >  2:1227345/1‑101 (MQ=255)


                                                                                             aaGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGAGTc        <  1:1552303/101‑1 (MQ=255)


                                                                                             aaGTGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGAGTc        <  2:2918299/101‑1 (MQ=255)


                                                                                                tGAGCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGAGTcgcg     <  2:3970519/101‑1 (MQ=255)


                                                                                                   gCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGAGTCGCGCCa  <  1:4482463/101‑1 (MQ=255)


                                                                                                   gCCCA.CCGGTTCGGA.GGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGAGTCGCGCCa  <  2:914201/101‑1 (MQ=255)


GAAGGTCAGACGTTGTGCAAAAGCACCCGGGGCGGATGGCTTACGCGGTATGGCGCGTGCCAAAGACGGCGGCCGCAAAGG.C.GCGCC..ATAAGTGAGCCCACCCGGTTCGGAGGGTTGGATGCATAAATCGTCATGATCCGCCCTCCCTGTCTGAATTGCCGGATGCGGGCAAAATGCACGCGCCCCCGAGTCGCGCCA  >  NC_014034/2040348‑2040545

Base quality scores:


ATCG

< 3 ≤


ATCG

< 23 ≤


ATCG

< 30 ≤


ATCG

< 34 ≤


ATCG

< 40 ≤


ATCG