| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 904,926 | Δ1 bp | 96.6% | intergenic (+30/‑166) | RCAP_rcc00821 → / → murB | hypothetical protein/UDP‑N‑acetylmuramate dehydrogenase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 904,926 | 0 | T→. | 96.6% | 4.0 0.0 ‑0.4 | 116 | intergenic (+30/‑166) | RCAP_rcc00821/murB | hypothetical protein/UDP‑N‑acetylmuramate dehydrogenase |
| Reads supporting (aligned to +/- strand): new base (64/48): ref base (1/1): total (66/50) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.61e-01 | ||||||||||
Only 100 of 144 total aligned reads displayed.
TGGCAGGCGGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCTTTTTG.GCT..GC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGC > NC_014034/904826‑905020
|
tGGCAGGCGGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCctct < 2:261440/101‑1 (MQ=255)
gccAGGCGGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCtt < 1:1086432/99‑1 (MQ=255)
gCAGGCGGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGGGCTGCCCCCCCCttt > 1:2023479/1‑101 (MQ=255)
gCAGGCGGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCttt < 2:1724527/101‑1 (MQ=255)
gCAGGCGGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCttt < 2:3499531/101‑1 (MQ=255)
cgggggggCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCtttt < 1:3333330/96‑1 (MQ=255)
cAGGCGGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCtttt < 1:2286923/101‑1 (MQ=255)
cAGGCGGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCtttt < 2:1125433/101‑1 (MQ=255)
gggggggCTGAGCGTGCTGCGCTGGCCGGGGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCttttg < 1:3269240/97‑2 (MQ=255)
aGGCGGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCttttg < 1:1637061/101‑2 (MQ=255)
aGGCGGGCGGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCttttg < 2:1376454/101‑2 (MQ=255)
ggCGGGCTGGGCGTGCTGCGCGGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCttttgg < 1:996369/101‑3 (MQ=255)
ggggTTGATCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGCCGCTGCCCCCCTCttttggct < 2:3366491/100‑5 (MQ=38)
gggCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.CTTTG.GCT..g > 1:1725835/1‑101 (MQ=255)
gCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTTTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGGGCGGCCGCCCTCTTTTGg.gtgcg > 1:2278930/1‑97 (MQ=255)
cTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCGGGCCCCCTCTTTTGg.gtgcgc > 2:1738570/1‑96 (MQ=255)
cTGAGCGTGCTGCGCTGGACGGTGCGGCGGCTCTTTGCCGGGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGGGCTGCCCCCCTCTTTTTgctgcgc > 2:3534609/1‑95 (MQ=38)
tGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGGTGCCCCCCTC.TTTTG.GCT..Gcgcc > 1:3692708/1‑98 (MQ=255)
tGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgcc > 2:3799087/1‑98 (MQ=255)
tGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCCGCCCCCCTC.TTTTG.GCT..Gcgcc < 2:4405218/101‑4 (MQ=255)
aGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCTTTTTgctgcgccga > 2:2158273/1‑92 (MQ=255)
gCGTGCTGCGCTGGCCGGTGCGGGCGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgccaaa < 1:4391059/101‑7 (MQ=25)
gCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgccaaa < 2:4298826/101‑7 (MQ=255)
cGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgccaaaa < 1:543397/101‑8 (MQ=37)
gTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..Gcgccaaaat < 1:2864022/101‑9 (MQ=37)
ctgcGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCa > 1:2996326/1‑101 (MQ=25)
ggcgcTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAc < 1:1592884/100‑1 (MQ=25)
cTGGCCGGTGCGGTGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAccccc > 1:3649430/1‑101 (MQ=21)
cTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAccccc > 2:116562/1‑101 (MQ=21)
tGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCAcccccc > 2:2118434/1‑101 (MQ=21)
gCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.gg > 1:1830108/1‑101 (MQ=21)
ccGGTGCGGCGGCTCTTTTCCGCGATGCTCCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCTTTTGG.CTTC.GC..CAAAATTCACCCCCC.GGc < 2:422682/101‑1 (MQ=18)
ggTGCGGCGGCGCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGt < 2:4606809/101‑1 (MQ=21)
ggcggcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTg < 1:1331149/101‑1 (MQ=21)
ggggtctTTGCCGCGATGCGCCGGCGCGGCGGAGGGCGGGGCAGGGGGGCGCGGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCa < 1:4541392/97‑1 (MQ=17)
gcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCAcc > 1:55546/1‑101 (MQ=21)
gcTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCAcc > 2:1479203/1‑101 (MQ=21)
ctTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAgg < 1:2501909/101‑1 (MQ=21)
ttGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGaa < 2:2882401/101‑1 (MQ=21)
tGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGaaa > 2:4529002/1‑101 (MQ=21)
cgATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGcc > 2:2801335/1‑101 (MQ=21)
cgATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGcc > 2:3971655/1‑101 (MQ=21)
gATGCCCCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGccc < 1:3283003/101‑1 (MQ=21)
aTGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCg > 1:2693186/1‑101 (MQ=21)
tGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCgg < 2:140051/101‑1 (MQ=21)
tGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCgg > 1:3447674/1‑101 (MQ=21)
tGCACCGGCGCGACTGAGGGCGGGGCAGAGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCgg > 1:2438607/1‑101 (MQ=21)
cccGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGt < 2:374482/100‑1 (MQ=21)
cgcgACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CGAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTc < 1:2113328/101‑1 (MQ=21)
gcgACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTcc > 2:1756770/1‑101 (MQ=21)
cgACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAATATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCt < 1:3948389/101‑1 (MQ=21)
cgACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.CGCGCATTTGCACCACGAAAAAGCCCGGCGTTTTTCCt > 1:7330/1‑101 (MQ=18)
cgACTGAGGGCGGCGCAGGAGGGCGCTGCCTCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCCTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCt < 1:440122/101‑1 (MQ=18)
gACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTg > 2:3213770/1‑101 (MQ=21)
gACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCACGGCGTTCTTCATg > 2:433502/1‑101 (MQ=18)
gACTGAGGGCGGGGCA.GGGGGCGCGGCCCCCCCCCTTTGG.CCTC.GC..CAAAAATTCCCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTgg < 2:2221254/101‑1 (MQ=25)
aCTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGGAAAACGCCGGCGTTTTTCCTgg > 2:740969/1‑101 (MQ=18)
tGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGGGC..CAAAATTCACCCCCC.GGCGTATTTGCACCACGAAAAAGCCCGGCGTTTTTCCTGGTc > 2:1522456/1‑101 (MQ=21)
tGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTc > 1:732878/1‑101 (MQ=21)
gAGGGCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCg > 1:1305927/1‑101 (MQ=21)
gggCGGGGCGGGGGGACGCTCCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGaa < 2:1446298/101‑1 (MQ=21)
gggCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGaa > 2:1875790/1‑101 (MQ=21)
gggCGGGGCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCT..GCGGCAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGaa < 2:1757080/101‑1 (MQ=21)
gCAGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGcc < 2:2071951/101‑1 (MQ=21)
cAGGGGGGCGCTTCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCg < 2:359727/101‑1 (MQ=21)
aGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgg > 2:2368886/1‑101 (MQ=25)
aGGGGGGCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgg > 1:2557930/1‑101 (MQ=25)
ggggggCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCggg > 2:4305059/1‑101 (MQ=25)
gggggCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgggg < 1:3349761/101‑1 (MQ=25)
gggggCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgggg > 1:3282318/1‑101 (MQ=25)
ggggCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACCCCggtcg > 1:2552987/1‑98 (MQ=21)
gggCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCgggggg < 1:2266876/101‑1 (MQ=25)
ggCGCTGCCCCCCTCTTTTGGCTCC..GC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGa < 1:3534867/101‑1 (MQ=25)
ggCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGa < 1:3868298/101‑1 (MQ=25)
ggCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGa < 1:3837191/101‑1 (MQ=25)
ggCGCTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGa > 1:3763516/1‑101 (MQ=25)
gcgcTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCCCCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAg < 1:1522565/101‑1 (MQ=25)
gcccTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTGCCCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAg < 1:4032029/98‑1 (MQ=21)
cgcTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGt > 2:110867/1‑101 (MQ=37)
cgcTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGt > 1:1726610/1‑101 (MQ=37)
cgcTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGt > 1:3426220/1‑101 (MQ=37)
gcTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTc > 1:140895/1‑101 (MQ=37)
cTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc > 1:1080083/1‑101 (MQ=37)
cTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc > 1:2123970/1‑101 (MQ=37)
cTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc > 2:2596578/1‑101 (MQ=37)
cTGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTcc < 2:1726491/101‑1 (MQ=37)
cTGCCCCCCT.ATTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCAACGGGAAAAAGAACGGCGTTNNNNNTGGTCGTAATACACCGGGGGGAggtc > 1:2393677/1‑98 (MQ=12)
tGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCg > 2:3719575/1‑101 (MQ=37)
tGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCg < 2:2692990/101‑1 (MQ=37)
tGCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCg > 1:39017/1‑101 (MQ=37)
gCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGc > 2:1924402/1‑101 (MQ=37)
gCCCCCCTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGCCAAAAAACGCCGGGGGGGGTCCGc > 1:4033166/1‑101 (MQ=25)
ccccccTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCt < 2:807826/101‑1 (MQ=37)
ccccccTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCt > 2:1549671/1‑101 (MQ=37)
cccccTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCtt < 1:694534/101‑1 (MQ=37)
cccccTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCtt < 1:4526498/101‑1 (MQ=37)
cccccTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCtt < 1:3799372/101‑1 (MQ=37)
ccccTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTg > 1:3595983/1‑101 (MQ=37)
ccccTC.TTTTG.GCTGCGC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGACCGCTTg < 2:444012/101‑1 (MQ=37)
ccttttttG.GCC..GCCGCAAAATTCCCCCCCCGGGCTTTTTTCCACAAGAAAAAACCCGGGCGTTTTCCCTGGCCAAAATCCGCCGGGGGGAGTCCGCTTGc < 2:1604907/98‑1 (MQ=255)
|
TGGCAGGCGGGCTGAGCGTGCTGCGCTGGCCGGTGCGGCGGCTCTTTGCCGCGATGCACCGGCGCGACTGAGGGCGGGGCAGGGGGGCGCTGCCCCCCTCTTTTTG.GCT..GC..CAAAATTCACCCCCC.GGCGTATTTGCACCAGGAAAAAGCCCGGCGTTTTTCCTGGTCGAAATACGCCGGGGGGAGTCCGCTTGC > NC_014034/904826‑905020
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 32 ≤
ATCG
< 39 ≤
ATCG
|