Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,193,628 | +GGG | 100% | intergenic (+93/‑158) | metK → / → trmB | methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,193,628 | 1 | .→G | 100.0% | 22.0 | 11 | intergenic (+93/‑158) | metK/trmB | methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase |
Reads supporting (aligned to +/- strand): new base (0/11): ref base (0/0): total (0/11) | ||||||||||
* | NC_014034 | 1,193,628 | 2 | .→G | 100.0% | 22.0 | 11 | intergenic (+93/‑158) | metK/trmB | methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase |
Reads supporting (aligned to +/- strand): new base (0/11): ref base (0/0): total (0/11) | ||||||||||
* | NC_014034 | 1,193,628 | 3 | .→G | 100.0% | 22.0 | 11 | intergenic (+93/‑158) | metK/trmB | methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase |
Reads supporting (aligned to +/- strand): new base (0/11): ref base (0/0): total (0/11) |
GGTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...GGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGCCAAGGAAAAGCGCAAGACCGGGAAGGGTCGC > NC_014034/1193529‑1193694
|||
ggTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCcgc...g < 1:4593993/101‑1 (MQ=255)
ggTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCcgc...g < 1:4450781/101‑1 (MQ=255)
tGAGCCGGTTTCAAAAGATCACGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCcgccgcgt > 2:4159425/1‑96 (MQ=255)
gAGCCGGTTTCAAAAGATCACGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...gggggg < 1:712576/101‑4 (MQ=255)
aGCCGGTTTCAAAAGATCAAGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCAGAGGCGACCcgcccgccgg > 1:4616966/1‑94 (MQ=38)
gCCGGTTGCAAAAGATCGCGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggggggct < 2:3968196/101‑6 (MQ=255)
ccGGTTTCAAAAGATCACGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggggggggc > 1:3980567/1‑95 (MQ=255)
ccGGTTTCAAAAGATCACGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggggggctc < 2:2480362/101‑7 (MQ=255)
cGGTTTCAAAAGATCAGGGGGAAGGGGG.CTT.GGGCCCCTTTTTTAATGCGTTGCAGGATTTTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggggggctcc < 1:1385114/101‑8 (MQ=25)
cGGTTAAAAAAGATCAGGGGGAGGGGGG.CTT.CGCCCCCTTTTTTCATGGGTTGCAGGATTTTTCGCCTGGGGCAACCCCGAGGCGACCCGC...ggggggctcc < 1:1577071/101‑8 (MQ=21)
tttCAAAAGATCAGGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggggggctccgcc < 1:2872118/101‑11 (MQ=37)
aTCACGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGCAcc < 2:2997864/101‑1 (MQ=21)
cagggggAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGCAcccc < 2:2264610/98‑1 (MQ=21)
cACGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGGGGCGACCCGCGGGGGGCTCCGCCCCCCGCAcccc < 2:3018585/101‑1 (MQ=21)
gggggAAAGGGC.CTTGCGCCCCCCTTTTCCCTGCGTTCGAGGATATTCCCCCCGGGGCAGCCCCGGGGCGCCCCGCGGGGGGCTCCGCCCCCCGCAccccc < 1:2351965/100‑1 (MQ=2)
ggggAGGGGGG.CTG.CGGCCCCCTTTTTCGTGCGTTGCAGGATATTTCGCCTCGGGCAGGCCCGAGGCGCCCCGCGGGGGGCTCCGCCCCCCGCACCCCCCg < 1:2098958/101‑1 (MQ=17)
ggAAGGGGGCCTT.CGCCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCCCGGGCAGGCCCGAGGCGCCCCGCGGGGGGCTCCGCCCCCCGCACCCCCCgg < 2:2124239/101‑1 (MQ=14)
cttttttCTTGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGCCCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGCCAAGGaaaa < 2:4616665/99‑1 (MQ=11)
tttttCATGGTTTGCAGGATTTTCCGCCTGGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGCCAAGGAAAAgc < 1:931851/101‑1 (MQ=11)
ctgggtttGCAGGATTTTCCGCCGCGGCCAGCCCCGAGGCGCCCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGCCAAGGAAAAGCGCAAg < 2:3202646/95‑1 (MQ=11)
tgaaGGATTTTTCGCCTGGGGCAGGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGCCAAGGAAAAGCGCAAGACCGGGa < 2:3733984/98‑1 (MQ=11)
tttgccccgcGGGCAAGCCCGAGGCGCCCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGCCAAGGAAAAGCGCAAGACCGGGAAGGGTcgc < 1:4159713/92‑1 (MQ=14)
|||
GGTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGG.CTT.CGGCCCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...GGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGCCAAGGAAAAGCGCAAGACCGGGAAGGGTCGC > NC_014034/1193529‑1193694
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 8 ≤
ATCG
< 19 ≤
ATCG
< 30 ≤
ATCG
< 39 ≤
ATCG
|