| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,820,393 | +C | 2.3% | intergenic (+84/‑102) | RCAP_rcc01683 → / → RCAP_rcc01684 | terminase‑like family protein/HK97 family phage portal protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,820,393 | 2 | .→C | 2.3% | 2.3 ‑4.5 ‑0.1 | 132 | intergenic (+84/‑102) | RCAP_rcc01683/RCAP_rcc01684 | terminase‑like family protein/HK97 family phage portal protein |
| Reads supporting (aligned to +/- strand): new base (0/3): ref base (102/27): total (102/30) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.08e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.56e-01 | ||||||||||
Only 100 of 163 total aligned reads displayed.
AGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACGG > NC_014034/1820293‑1820493
|
aGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGGGTGaaa > 1:4077496/1‑101 (MQ=255)
ggTGCGCGGGCTTTGAGCGCGCAAGGGCGTACTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..c > 1:4130809/1‑101 (MQ=255)
gTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..cc > 2:638404/1‑101 (MQ=255)
gTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..cc > 1:4157130/1‑101 (MQ=255)
gTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..cc > 1:809859/1‑101 (MQ=255)
tGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTTCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..ccc < 2:3108460/101‑1 (MQ=255)
gcgGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCg > 2:2613064/1‑101 (MQ=255)
cgGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGc > 1:2251519/1‑101 (MQ=255)
cgGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..AGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGc > 2:3260670/1‑101 (MQ=255)
gggCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCt > 1:1385695/1‑101 (MQ=255)
gggCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCt > 2:3182940/1‑101 (MQ=255)
ggCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCtt < 2:3800063/101‑1 (MQ=255)
gCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTc < 1:2097880/101‑1 (MQ=255)
cTTTGAGCGCGCAAGGGCTTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTAAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCt < 2:2239545/101‑1 (MQ=255)
ttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGc > 1:2811991/1‑101 (MQ=255)
ttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGc > 2:1830340/1‑101 (MQ=255)
tGAGCGCGCAAGGCCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGTGGGGGTTAAA..CCCCCGCTTCtctc > 1:2271538/1‑98 (MQ=25)
ggggcgcgaAGGGGCTTTTTGGGACAAGAAAAAAGCTGCTTTTTTTTTTTTGGTAAAAATC..CGCCCCGGGGGTGCGGGGGTGTGAAC..CCCCCGCTTCTGcc < 1:465094/98‑1 (MQ=16)
cgcgcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCgg > 2:1363600/1‑101 (MQ=255)
gcgcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGa > 1:2344980/1‑101 (MQ=255)
cgcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGaa > 2:2248411/1‑101 (MQ=255)
cgcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCACCGCTTCTGCCGCGGaa > 2:4244487/1‑101 (MQ=255)
cAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAAt > 1:3545823/1‑101 (MQ=255)
ggCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTgg > 2:2364894/1‑101 (MQ=255)
gCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGt > 2:2051022/1‑101 (MQ=255)
tATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGa > 1:2293479/1‑101 (MQ=255)
tATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGa > 2:4441939/1‑101 (MQ=255)
aTTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGaa > 2:2820404/1‑101 (MQ=255)
tttGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGaaa > 1:2995348/1‑101 (MQ=255)
ttGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAg > 2:534461/1‑101 (MQ=255)
tGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAgg > 2:749556/1‑101 (MQ=255)
tGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAgg > 1:1718424/1‑101 (MQ=255)
tGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAgg > 1:1320600/1‑101 (MQ=255)
ggACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAggg > 1:3124103/1‑101 (MQ=255)
ggACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAggg > 1:1556623/1‑101 (MQ=255)
gACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGt > 1:2979629/1‑101 (MQ=255)
aCCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTc > 2:3393794/1‑101 (MQ=255)
aCCAGGAAAAAGCTGCGTGTTTTTTCTGGGTGAAAATA..CGCCAGGGGGGTGCGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTc < 1:1376436/101‑1 (MQ=255)
cAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCgg > 1:4099535/1‑101 (MQ=255)
aaGGAAAAAGTGGGTTTTTTTTTATGGGAAAAAAGA..CGCCGGGGGGGGGCGGGGGGGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCgg < 1:1868429/100‑1 (MQ=255)
aGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCggg > 2:2510090/1‑101 (MQ=255)
ggAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCgggg > 2:3226615/1‑101 (MQ=255)
aaaaaGGTGCGTGTTTTTTCTTGGTGAAAATA..CGCCGGGGGGTTGGGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGtt < 1:1455453/101‑1 (MQ=37)
aaaaGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGttt > 1:1771610/1‑101 (MQ=255)
aaaGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGtttt > 1:382563/1‑101 (MQ=255)
aaacgttgttttttttTTTTGGGAAAAAA..CGCGCCGGGGGGGGGGGGGGGGGAAACCCCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGttt < 1:149212/91‑1 (MQ=255)
atgttggttttttttTTTTGGGAAAAAA..CGGGCGGGGGGGGGGGGGGGGTGAAACCCCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGtttt < 2:4067135/92‑1 (MQ=255)
aGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTcc > 1:3496111/1‑101 (MQ=255)
gttGCGTTTTTTTTCTTGTGGAAAATA..CGCCAGGGGGGTGGGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTccc < 1:1927889/99‑1 (MQ=255)
gctggttgtTTTTTCTTGGTGAAAACC..CGCCGGGGGGGGGGGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTccc < 1:2911593/95‑1 (MQ=255)
cTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCg > 2:3906365/1‑101 (MQ=255)
agttgtgtTTTTTTTTTGGGAAAAAAGCCCCCAGGGGGGGGGGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTcc < 1:444423/97‑1 (MQ=255)
cGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGcc > 1:434345/1‑101 (MQ=255)
tgtTTTTTCTTGTTGAAAACC..CGCGACGGGGGTGCGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGTAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCt < 2:4577863/101‑1 (MQ=38)
tgtTTTTTCTTGGTGAAAATC..CGCCAGGGGGGTGCGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCt < 2:2976543/101‑1 (MQ=255)
gtTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtt > 2:3530491/1‑101 (MQ=255)
gtTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtt > 2:848678/1‑101 (MQ=255)
ttttttTTTGGTAAAAATG..CGCCACGGGGGTGCGGGGGTTTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCttt < 2:4524087/101‑1 (MQ=38)
ttttttCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCttt > 1:2678759/1‑101 (MQ=255)
tttttCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt > 1:1078508/1‑101 (MQ=255)
tttttCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt > 2:790496/1‑101 (MQ=255)
tttttCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt > 1:1202023/1‑101 (MQ=255)
ttttttggAAAAAA..CGCCCCGGGGGGGGGGGGGGTTGCAACCCCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTc < 1:1078602/94‑1 (MQ=255)
ttcgtaaaaaTA..CGCCACGGGGGTGGGGGCGTGTAAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTg < 2:773520/95‑1 (MQ=38)
tGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGCCGGGGTTTTCCCGGCCCTTTTTCTTTgg > 2:487504/1‑101 (MQ=255)
taaaaaTC..CGCCGGGGGGGTGGGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCg < 2:2293317/99‑1 (MQ=255)
gAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCgg > 1:91121/1‑101 (MQ=255)
aaaTA..CGCCACGGGGGTTCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGACgggg > 1:721412/1‑101 (MQ=255)
aaTA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGTCCCAAAGGGCCGGGCTTTTCCGGGCCTTTTTTCTTTGG.CGGGGcc > 2:4575271/1‑101 (MQ=25)
aaTA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGc < 1:2135860/101‑1 (MQ=255)
aaTA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGc > 2:4633758/1‑101 (MQ=255)
tA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCt > 2:1423183/1‑101 (MQ=255)
tA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCt > 1:2458485/1‑101 (MQ=255)
aaaacccccggggggggggggggggTGAAACCCCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCggg < 1:230370/91‑1 (MQ=255)
atgcGCCACGGGGGTCCNGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGcc < 2:2102234/98‑1 (MQ=255)
a..CGCCACGGGGGTGGGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCtt < 2:1433183/101‑1 (MQ=255)
tgcgcccggggggggggggggttTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCt < 1:638465/93‑1 (MQ=255)
ggcggggggggggggggggggtgCCACC..CCCGCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCt < 1:3183183/93‑1 (MQ=255)
gcGCCAGGGGGGTGCGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCtt < 2:809785/100‑1 (MQ=255)
gcggggggggtggggggttgTGACC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgg < 2:2344818/96‑1 (MQ=255)
caggggggtgcgggggtgTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggc < 2:2811775/98‑1 (MQ=255)
cagcggggtgcgggggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggc < 2:3111590/97‑1 (MQ=255)
aCGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGGTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggcc > 2:104571/1‑101 (MQ=255)
ggggggtgcgggggtgGGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccg < 2:3636831/100‑1 (MQ=255)
cgggggtgcgggggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccg > 2:205629/1‑101 (MQ=255)
gggggtgcgggggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccgg > 2:1557650/1‑101 (MQ=255)
gggggtgcgggggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccgg > 1:1914719/1‑101 (MQ=255)
gcgggggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCcgcg > 1:4195125/1‑101 (MQ=255)
gggggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGcgac > 2:1912765/1‑101 (MQ=255)
gggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCTTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGcgacga > 1:1982176/1‑101 (MQ=255)
ggtgTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgag < 2:3076218/101‑1 (MQ=255)
tgtgAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgagga > 1:3689129/1‑101 (MQ=255)
gtgAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgaggag > 2:4262917/1‑101 (MQ=255)
tgAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGgaga > 1:1264856/1‑101 (MQ=255)
gAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAGAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGaa > 1:4641763/1‑101 (MQ=255)
gAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGaa > 2:2941244/1‑101 (MQ=255)
gAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGaa > 2:4478137/1‑101 (MQ=255)
aa..CCCCCGCTTCTGCCGCGGAAATCTGGTCGCAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACg > 1:4176008/1‑101 (MQ=255)
aa..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACg > 2:4395052/1‑101 (MQ=255)
a..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACgg > 2:2231069/1‑101 (MQ=255)
|
AGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACGG > NC_014034/1820293‑1820493
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|