| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,391 | +C | 90.3% | intergenic (‑187/‑118) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,391 | 1 | .→C | 90.3% | 38.6 ‑1.8 ‑1.3 | 144 | intergenic (‑187/‑118) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (75/55): ref base (5/9): total (80/64) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.58e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.74e-02 | ||||||||||
Only 100 of 187 total aligned reads displayed.
TGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.G..CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCCGAACC > NC_014034/2249291‑2249491
|
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.c.g..c > 1:3413164/1‑101 (MQ=255)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.c.g..c > 2:594752/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.G..cc.cc < 2:4247913/101‑1 (MQ=255)
cggccT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.G..cc.cc < 2:3154963/97‑1 (MQ=255)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.c.g..c < 1:2451327/101‑1 (MQ=17)
gactccccccGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAG.C.C..cc < 1:3450227/96‑1 (MQ=17)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.G..cc.cccct > 1:3062505/1‑99 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.G..cc.ccccttc > 2:157834/1‑97 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.G..cc.ccccttc < 1:1780179/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.G..cc.ccccttc < 2:741661/101‑5 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.G..cc.ccccttcg < 2:1288833/101‑6 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGGGCA..GCCAGAGGGGGGCAG.C.G..cc.ccccttcg > 2:3336467/1‑96 (MQ=255)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.C.G..CC.CCCtgc > 2:1905000/1‑99 (MQ=0)
cccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTcgcg > 2:4227192/1‑101 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCgcgggc > 1:1799212/1‑101 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCgcgggc > 1:3520456/1‑101 (MQ=255)
ggATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.C.G..CC.CCCtgccccg < 2:3054626/101‑7 (MQ=0)
ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCgcgggcg > 1:2624461/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGggcggc < 2:1624353/101‑1 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGcc > 2:4603816/1‑101 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCcg > 1:4445668/1‑101 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCcg > 1:3942320/1‑101 (MQ=255)
ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCcgcg > 2:3916653/1‑101 (MQ=255)
ttaGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGa < 2:2773756/99‑1 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGa < 2:3821064/101‑1 (MQ=255)
gAGACAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGAc < 2:4170505/101‑1 (MQ=255)
ggCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGAcgc < 1:1910438/101‑1 (MQ=255)
aaGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGAcgcgcc > 1:516387/1‑100 (MQ=255)
aGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACgcgcgc > 1:3308320/1‑101 (MQ=255)
aGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACgcgcgc < 1:6732/101‑1 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGcgcc > 2:1985429/1‑101 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGcgcc < 1:2975977/101‑1 (MQ=255)
tGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGcgccgc > 2:1996427/1‑101 (MQ=255)
tGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCC.GGGGGTGAA.AGGCGCA..GCCAGAAGGGGGGAG.CGG..CC.CCCCTCGCCGGCGGCCGCGGCGCGCGCCGCa > 2:4505292/1‑101 (MQ=25)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGAGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:3556136/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGAAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:4115703/101‑1 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATATCCGGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:3371318/101‑1 (MQ=37)
gggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAG.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 1:4271465/1‑101 (MQ=255)
gggg..ggCTTTCATCTTGCCGAAAATAGCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:4622264/101‑1 (MQ=255)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 1:200484/1‑101 (MQ=255)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg < 2:2208392/101‑1 (MQ=255)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 1:124686/1‑101 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGt < 1:3767092/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 1:321237/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 2:112372/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:2049931/1‑101 (MQ=255)
ttCATCTTGCCGAAAATATCCCGGGTGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGGCGTGc > 1:2608560/1‑101 (MQ=37)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc > 1:1385125/1‑101 (MQ=255)
ttCATCATGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc < 1:768392/101‑1 (MQ=255)
cATCTTGCCGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc < 1:4206859/101‑1 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc > 1:2855236/1‑101 (MQ=255)
aTCTTGCCGAAAATATCCGGGGGGGTGAA.TGGCTCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACATGTCGTGcccc < 1:4032399/101‑1 (MQ=37)
aTCTTGCCGAAAATATCCCGGGGGGGGAA.TGGGGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGGCGGGcccc > 2:1368781/1‑101 (MQ=25)
cTTGGCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCATAGGGTGGCAG.C.GC.CC.CCCTGCGCGGGCGGCCGCGACTCTCGCCGCACCAGGTCGTGCCCCtt < 2:2329171/101‑1 (MQ=21)
cTTGCGGAAAATATCCGGGGGGGTGAA.GGGCGCA..GCCGGGGGGGGGCAGCC.C..CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt < 1:997103/101‑1 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 1:379997/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:2626868/1‑101 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 1:3628035/101‑1 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt > 2:2635338/1‑101 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa < 2:3694959/101‑1 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa > 1:1066059/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt < 1:2321959/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 2:2994249/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 1:2161595/1‑101 (MQ=255)
aaaTATCGCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 2:2461328/101‑1 (MQ=255)
aagcccgtggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:594813/93‑1 (MQ=38)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt > 1:445804/1‑101 (MQ=255)
atatCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGCCACGCGCCGCAACAGGTCGTGCCCCTTGGTCAGTCTg > 2:2276934/1‑101 (MQ=37)
tatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGt > 2:3475903/1‑101 (MQ=255)
tatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGt > 2:2572905/1‑101 (MQ=255)
ccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa > 1:927373/1‑101 (MQ=255)
cGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 2:3898244/101‑1 (MQ=255)
cGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGAGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 2:1807724/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 2:3150915/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 1:644304/101‑1 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa > 1:4292033/1‑101 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa < 2:4086457/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 2:4291230/101‑1 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 2:1147735/101‑1 (MQ=255)
tGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc > 2:1055919/1‑101 (MQ=255)
gAA.TGGCGCA..GCCAGGGGGGGGCAGCC.C..CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa < 1:4066306/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 2:3062261/101‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 2:649149/101‑1 (MQ=255)
gggCGCA..GCGAGGGGGGGGCAGCC.C..CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:157848/100‑1 (MQ=255)
a..GCCAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGc > 2:2905234/1‑101 (MQ=255)
gCCAGGGGGGGGCCC.C.GCCCC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGc < 1:1658215/101‑1 (MQ=255)
ccggagGGGGGCAGCC.C..CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCg < 1:1049738/98‑1 (MQ=255)
ccAGAGGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCg > 2:612521/1‑101 (MQ=255)
agagGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:3520522/1‑101 (MQ=255)
agagGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:897599/1‑101 (MQ=255)
gagGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt < 1:349240/101‑1 (MQ=255)
agGGGGGCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc < 1:3819061/101‑1 (MQ=255)
gggggCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGa > 1:526913/1‑101 (MQ=255)
ggggCAGCC.C..CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGAt < 2:254508/101‑1 (MQ=255)
ggggCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGAt > 1:690054/1‑101 (MQ=255)
ggggCAG.C.G..CCACCCTTCGCGGGCGGCCGCGACGTGCGCGGCAACAGGTCGTGCCCCTTTGACATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGAt > 1:3851508/1‑101 (MQ=255)
gcggCAG.C.GC.CC.CCCTGCGCGGGCGGCCCCGCCGCGCGCCGCACCAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGAt < 2:516339/99‑1 (MQ=255)
gggCAG.C.CC.CC.CCCTCCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATg < 1:1736739/101‑1 (MQ=255)
gCAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTc < 2:3412910/101‑1 (MQ=255)
cAG.C.GC.CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTcc > 2:3985544/1‑101 (MQ=255)
|
TGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.C.G..CC.CCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCCGAACC > NC_014034/2249291‑2249491
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|