| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,551 | +T | 1.9% | intergenic (+23/+171) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,551 | 1 | .→T | 1.9% | 4.7 ‑1.6 ‑0.7 | 162 | intergenic (+23/+171) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (2/1): ref base (45/114): total (47/115) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.02e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.17e-01 | ||||||||||
Only 100 of 175 total aligned reads displayed.
GCGCCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GGGG.GCGCTGCCCCC.CTC.CTG..CTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCC > NC_014034/2566452‑2566644
|
gcgcCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGccccc > 1:1763875/1‑101 (MQ=255)
tATGCGGTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCc.ctctt < 1:3729515/101‑3 (MQ=255)
tATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCc.ctctt < 2:3209079/101‑3 (MQ=255)
aTGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTg < 2:4014949/101‑1 (MQ=255)
aTGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTg < 1:628652/101‑1 (MQ=255)
gCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTggc < 1:1394923/101‑3 (MQ=255)
gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTggcct < 1:3895620/101‑5 (MQ=39)
aTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTggcctt < 2:1659909/101‑6 (MQ=38)
tCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTggccttcggc > 2:1480413/1‑92 (MQ=37)
cGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGcc < 1:4189647/101‑1 (MQ=37)
cGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGcc < 2:2103579/101‑1 (MQ=37)
gATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCa < 2:373762/101‑1 (MQ=37)
gATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCa > 2:1041278/1‑101 (MQ=37)
aTGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTAGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCaa < 1:3924085/101‑1 (MQ=25)
tGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAAt < 1:1609935/101‑1 (MQ=37)
gCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAAtt < 2:2292218/101‑1 (MQ=37)
cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTc < 1:3216613/101‑1 (MQ=37)
gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCa < 2:2878599/101‑1 (MQ=37)
gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCa < 2:2545304/101‑1 (MQ=37)
gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCa < 1:2629475/101‑1 (MQ=37)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCAccccc < 2:898937/101‑1 (MQ=25)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCAcccccc < 1:1662172/101‑1 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCg < 1:229977/101‑1 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCg < 1:1528177/101‑1 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCg < 1:730590/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCgg < 1:52255/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCgg < 1:4585449/101‑1 (MQ=25)
gccGGGGGTTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGa < 2:2989507/100‑1 (MQ=21)
cccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CCCTTTGC.CTTC.CGCCCATTCACCCCCCgggg > 1:2437129/1‑100 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGGCATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGat < 2:399086/101‑1 (MQ=21)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGGGCGCTCTTGGACG.AAACGGGGG.GCGGGGCCCCC.CTCTTTGC.CTTC.AGCCACTTCAGCCCCCCGGagat > 2:2732121/1‑101 (MQ=255)
aGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATAtt < 1:2930665/101‑1 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATAttt < 1:634884/101‑1 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTc < 1:4294553/101‑1 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATACTTc < 1:3591918/101‑1 (MQ=21)
gTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCgg < 1:1572687/101‑1 (MQ=21)
gTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCCTC.TGCCCATTCACCCCCCCGGAGATTTCgg > 2:501699/1‑101 (MQ=21)
ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCggg > 1:2827380/1‑101 (MQ=21)
ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCggg < 2:555777/101‑1 (MQ=21)
ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCCGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCCGGAAATTTTggg > 2:4079914/1‑101 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGc < 1:1433966/101‑1 (MQ=21)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTCTTTGC.CTTC.GGCCAATTCACCCCCCCGGATATTTCGGGCa > 2:2244777/1‑101 (MQ=21)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCCGGATATTTCGGGCa > 1:4470570/1‑101 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAAG.GGGG.GGGCTGCCCCC.CTCTTTG..CCTCTGGCCAATTCACCCCCCCGGGAATTTTCGGCaa > 1:3995048/1‑101 (MQ=16)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAg < 2:2106335/101‑1 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAg < 1:4538410/101‑1 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAg < 1:1027741/101‑1 (MQ=21)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCCGGATATTTCGGGCaaa > 1:1875235/1‑100 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGAt < 2:4296838/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa < 1:4086259/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATa < 2:4475018/101‑1 (MQ=21)
ccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATaa < 1:1149516/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCCGCCCCC.CCC.TTGGCCCTC.TGCCCAATCACCCCCCAGCGAATTTCCAGCAAAATaaa > 1:3552382/1‑101 (MQ=255)
cgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaaga > 2:3378349/1‑101 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaaga < 1:4128806/101‑1 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaaga > 1:2809323/1‑101 (MQ=21)
aCATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAaagaag < 2:3109085/101‑1 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCt < 1:2317065/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:823683/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt > 2:1809397/1‑101 (MQ=21)
gCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCCCCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCttt < 1:3311393/101‑1 (MQ=21)
gCTGGCGCGCGCGCTGATACG.AAAC.GGGGTGCGCTCCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGTTATTTCGGGCAAGATAAAGAAGGTCttt < 2:776877/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 2:269921/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 2:3594595/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc < 2:4561765/101‑1 (MQ=21)
gcgcgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:3271464/101‑1 (MQ=21)
gcgcgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:4637538/101‑1 (MQ=21)
gcgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt > 1:4404563/1‑101 (MQ=21)
gcgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 1:2863293/101‑1 (MQ=21)
cgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGGTAAAGAAGGTCTTTTCCTTTc < 1:1909872/101‑1 (MQ=21)
cgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 2:927318/101‑1 (MQ=21)
gcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa < 1:2887161/101‑1 (MQ=21)
gcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa < 2:1107032/101‑1 (MQ=21)
gatctctGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa < 1:949411/98‑1 (MQ=21)
cgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt > 1:2541633/1‑101 (MQ=21)
gcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 2:358972/101‑1 (MQ=21)
gcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 2:3829338/101‑1 (MQ=21)
gcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:2371067/101‑1 (MQ=21)
gcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 2:4332674/101‑1 (MQ=21)
agaCG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGCCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGccc < 1:2658160/101‑1 (MQ=21)
aCG.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGa > 1:3476249/1‑101 (MQ=21)
g.AAACGGGGG.GCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 1:433325/101‑1 (MQ=21)
aaacggggg.gCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat < 1:4226586/96‑1 (MQ=21)
aacggggg.gCGCTGCCCCC.CTC.TTGGCCTTC.GGGCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata < 1:3970909/97‑1 (MQ=25)
aacggggg.gCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata > 2:2512064/5‑101 (MQ=25)
aacggggg.gCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTCATCTTTCCCGAAata > 1:3728697/5‑101 (MQ=21)
cggggg.gCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 1:2141213/99‑1 (MQ=25)
cagggg.gCGCTG.CCCC.CTC.TTGGCCTTT.GGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggg > 1:1296958/3‑101 (MQ=0)
ggggg.gCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc < 2:3092070/100‑1 (MQ=25)
agggg.gCGCTGCCCCCTCTT.GGC..CTTT.GGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg > 1:3136529/2‑101 (MQ=0)
agggg.gCGCTG.CCCC.CTC.TTGGCCTTT.GGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg > 1:3636398/2‑101 (MQ=0)
gggg.gCGCTG.CCCC.CTC.TTGGCCTTT.GGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggg > 2:1500855/1‑100 (MQ=0)
ggg.gCGCTGCCCCCTCTT.GGC..CTTT.GGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggga < 1:1280857/101‑3 (MQ=0)
ggg.gCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCg < 1:4310501/101‑1 (MQ=25)
gg.gCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCgg < 2:1846739/101‑1 (MQ=37)
gg.gCGCTG.CCCC.CTC.TTGGCCTTT.GGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 2:2471942/1‑98 (MQ=2)
gg.gCGCTG.CCCC.CTC.TTGGCCTTT.GGCCAATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 2:2606470/1‑98 (MQ=2)
g.gCGCTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggg < 1:1041361/101‑1 (MQ=37)
gcTGCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGa > 1:3659540/1‑101 (MQ=37)
gCCCCC.CTC.TTGGCCTTC.GGCCAATTCACCCCCCGGGAGATTTCGGGCCAGATAAAAAAGGGCTTTTTCTTTTATCTTTTCCGGAAAATCCCCGGGGGGcc > 2:1755715/1‑101 (MQ=12)
|
GCGCCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GGGG.GCGCTGCCCCC.CTC.CTG..CTTC.GGCCAATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCC > NC_014034/2566452‑2566644
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|