BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,640,160	+C	100%	intergenic (‑136/+140)	thrS ← / ← RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,640,160	1	.→C	100.0%	343.1	113	intergenic (‑136/+140)	thrS/RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein
Reads supporting (aligned to +/- strand): new base (29/82): ref base (0/1): total (29/84)

Only 100 of 138 total aligned reads displayed.


CGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.C.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAC  >  NC_014034/2640061‑2640255


cGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGTAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.c                                                                                                 <  2:4214977/101‑1 (MQ=255)


 ggTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.cc                                                                                                <  2:420882/101‑2 (MQ=255)


  gTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.cct                                                                                               <  1:199436/101‑3 (MQ=255)


   ttGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.cctt                                                                                              <  1:1021698/101‑4 (MQ=255)


   ttGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.cctt                                                                                              <  2:13897/101‑4 (MQ=255)


   ttGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.cctt                                                                                              >  2:1402172/1‑98 (MQ=255)


    tGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.ccttc                                                                                             >  2:1242490/1‑97 (MQ=255)


    tGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.ccttc                                                                                             <  2:1880270/101‑5 (MQ=255)


     gCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.ccttcg                                                                                            <  2:2023419/101‑6 (MQ=255)


      cGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGCTGCCCCCCCCTTT.G.C.C.TTCgg                                                                                           >  1:2241583/1‑101 (MQ=255)


       gggTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGc                                                                                          <  2:3452555/101‑1 (MQ=255)


         gTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCa                                                                                        <  1:4242047/101‑1 (MQ=255)


          ttATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCaa                                                                                       <  2:775876/101‑1 (MQ=255)


             tgatgCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTc                                                                                    <  1:4056580/101‑1 (MQ=255)


             tgatgCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTc                                                                                    <  2:2630175/101‑1 (MQ=255)


              gatgCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGTCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTca                                                                                   <  1:3874659/101‑2 (MQ=255)


                 gcgcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCAccc                                                                                <  2:1043641/101‑1 (MQ=255)


                  cgcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCCATTCAcccc                                                                               >  2:4459636/1‑101 (MQ=38)


                  cgcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCAcccc                                                                               <  1:742829/101‑1 (MQ=255)


                   gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGGTGCCCCCCTCTTT.G.C.C.TTCGGCCAATTCCccccc                                                                              >  1:2171036/1‑101 (MQ=255)


                   gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCAccccc                                                                              <  2:588026/101‑1 (MQ=255)


                   gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCAccccc                                                                              <  1:4625344/101‑1 (MQ=255)


                    ccGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCAcccccc                                                                             <  2:1145390/101‑1 (MQ=255)


                    ccGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCAcccccc                                                                             <  2:2761747/101‑1 (MQ=255)


                       ggTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAg                                                                          <  2:1554785/101‑1 (MQ=255)


                        gTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAgg                                                                         <  2:2171866/101‑1 (MQ=255)


                          aTGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTa                                                                       <  2:3438448/101‑1 (MQ=255)


                            gCGACGCGGCGGGAGGCGTGTCAACCGGGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTAtt                                                                     <  1:1434330/101‑1 (MQ=25)


                            gCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTAtt                                                                     <  2:756326/101‑1 (MQ=255)


                                     cggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGG.G.C.TTCGGCCCATTCACCCCCCCAGGGATTTTGaggaag                                                            >  2:3682733/1‑96 (MQ=25)


                                       gccagCGTGTGAACCGTGGCGCTTTTGCTCAGGCGAAAGGGGGGCTGTGCCCCCCTC.TT.G.GCC.TTCGGGCAATTCACCCCCCGAGGTATTTGGAGCAAGAt                                                          <  2:513021/97‑1 (MQ=21)


                                       gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt                                                          <  1:1820549/101‑1 (MQ=37)


                                        cAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATg                                                         <  2:1805999/101‑1 (MQ=37)


                                        cAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATg                                                         <  1:2232739/101‑1 (MQ=25)


                                         aGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGa                                                        <  2:2367902/101‑1 (MQ=37)


                                          ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCCC.TT.G.G.CGCTTGGGCCATTTACCCCCCCAGGTATTTGGAGGAAGATGaa                                                       >  1:2089534/1‑101 (MQ=255)


                                           gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaa                                                      <  1:1897055/101‑1 (MQ=25)


                                            cGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaag                                                     <  1:58641/101‑2 (MQ=25)


                                               gtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaagacc                                                  <  1:1109101/101‑5 (MQ=25)


                                               gtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaagacc                                                  <  2:4104802/101‑5 (MQ=25)


                                                 catccGTGGCGCTTTTGCGCACGCCATATCGGGGCGCAGCGCCCCTC.TT.GCA.C.TTAGGCCAATTCGCCCCCCGAGGTATTTGGAGCAAGATGaaatgccat                                                <  2:2492458/98‑7 (MQ=255)


                                                  aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg                                              <  2:355009/101‑1 (MQ=21)


                                                   aCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATgg                                             <  1:1652240/101‑1 (MQ=25)


                                                       tGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTCG.T.C.TTTGGCCAATTCAGCCTCCGAGGTATTTTTGCCAAGATG.CAAGAGCATGGGTTc                                         >  2:3141611/1‑101 (MQ=16)


                                                       tGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc                                         <  1:2114179/101‑1 (MQ=21)


                                                       gggCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTc                                         <  2:2139839/100‑1 (MQ=25)


                                                         gcgcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCAt                                       <  2:898430/101‑1 (MQ=25)


                                                            cTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCtt                                    <  1:3304586/101‑1 (MQ=21)


                                                            cTTGTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCtt                                    <  1:2347939/101‑1 (MQ=25)


                                                             ttttGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTg                                   <  2:2517352/101‑1 (MQ=25)


                                                                 gcgcAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc                               <  1:2311517/101‑1 (MQ=21)


                                                                  cgcAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCa                              <  2:3073057/101‑1 (MQ=25)


                                                                   gcAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCaa                             <  2:843951/101‑1 (MQ=25)


                                                                    gccccgaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat                           <  2:2641040/95‑1 (MQ=14)


                                                                     agccAAAAGGGGGCCGCTGCCCCCCTC.TT.G.GTC.TTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAat                           <  2:746158/98‑1 (MQ=25)


                                                                      cccgaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat                         <  2:2473130/97‑1 (MQ=17)


                                                                        cgaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATcc                       >  1:1204884/3‑101 (MQ=17)


                                                                        cgaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATcc                       <  2:575675/99‑1 (MQ=17)


                                                                         gaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc                      <  1:1215644/100‑1 (MQ=17)


                                                                         gaaaAGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTANCTTGCCCCAAATATccc                      >  2:1778669/2‑101 (MQ=17)


                                                                          aaaGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATccc                      <  2:3189647/101‑1 (MQ=21)


                                                                          aaaGGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATccc                      <  1:518442/101‑1 (MQ=25)


                                                                          aaaAGGGGGCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg                     <  2:2748614/101‑1 (MQ=17)


                                                                          aaaAGGGGGCCCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCg                     <  1:258985/101‑1 (MQ=18)


                                                                           aaagggggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgg                    >  2:3705510/4‑101 (MQ=17)


                                                                             agggggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg                  >  1:1356112/2‑101 (MQ=18)


                                                                             agggggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg                  >  2:1578326/2‑101 (MQ=18)


                                                                                gggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACGCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg                <  2:2321714/101‑1 (MQ=25)


                                                                                gggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtg               >  2:3699403/1‑99 (MQ=18)


                                                                                gggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtg               >  2:4392741/1‑99 (MQ=18)


                                                                                gggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtg               >  1:4408096/1‑99 (MQ=18)


                                                                                gggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtg               <  2:2966740/101‑3 (MQ=18)


                                                                                gggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg                >  2:2721403/1‑101 (MQ=25)


                                                                                 ggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga              <  1:4092162/101‑4 (MQ=21)


                                                                                 ggCGCTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGGGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATCCCggggggga              >  2:2151925/1‑99 (MQ=18)


                                                                                 gccgcTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga              <  1:1084325/99‑4 (MQ=21)


                                                                                  gcgcTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag             <  1:4293630/101‑5 (MQ=21)


                                                                                  gcgcTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag             <  1:3417906/101‑5 (MQ=21)


                                                                                  gcgcTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag             <  2:4149903/101‑5 (MQ=21)


                                                                                   cgcTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCGCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgagg            <  2:3939473/101‑6 (MQ=21)


                                                                                   cgcTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgagg            >  2:1877863/1‑96 (MQ=21)


                                                                                   cgcTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgagg            <  2:2002466/101‑6 (MQ=21)


                                                                                    gcTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc           >  1:3459872/1‑95 (MQ=21)


                                                                                     cTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGGTATTTGCGGCAAGGGGAAAGGA.TGGGGGTT.TTCTTGCCCCCAATATCCCgggggggaggcg          >  1:1756701/1‑95 (MQ=18)


                                                                                     cTGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggcg          >  1:2889601/1‑94 (MQ=25)


                                                                                      tGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGCGGTATTTTGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCCAATATCCCGGGGGGGGGCCt          >  2:1749875/1‑101 (MQ=21)


                                                                                      tGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTcca          >  2:2032427/1‑100 (MQ=25)


                                                                                      tGCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCt          <  1:3683008/101‑1 (MQ=25)


                                                                                       gCCCCCCTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggggaggcgaa        >  1:127641/1‑93 (MQ=25)


                                                                                        ccccccTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGa        >  2:1541300/1‑101 (MQ=25)


                                                                                           cccTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg     >  1:2889481/1‑101 (MQ=37)


                                                                                           cccTC.TT.G.GAC.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg     <  1:2032281/101‑1 (MQ=37)


                                                                                            ccTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg    <  1:1402267/101‑1 (MQ=37)


                                                                                            ccTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg    <  1:3501361/101‑1 (MQ=37)


                                                                                            ccTC.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg    >  1:462203/1‑101 (MQ=37)


                                                                                             ctc.tT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa   >  1:3527331/1‑101 (MQ=37)


                                                                                             ctc.tT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa   >  2:3327683/1‑101 (MQ=37)


                                                                                              tc.tT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc  >  1:3813506/1‑101 (MQ=37)


                                                                                              tc.tT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc  <  1:1242583/101‑1 (MQ=37)


                                                                                              tc.tT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc  <  1:2882076/101‑1 (MQ=37)


CGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TT.G.G.C.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAC  >  NC_014034/2640061‑2640255

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG