| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,256,189 | +C | 90.4% | coding (1332/1734 nt) | recJ → | single‑stranded‑DNA‑specific exonuclease RecJ |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,256,189 | 1 | .→C | 90.4% | 38.3 ‑1.8 0.0 | 146 | coding (1332/1734 nt) | recJ | single‑stranded‑DNA‑specific exonuclease RecJ |
| Reads supporting (aligned to +/- strand): new base (68/64): ref base (4/10): total (72/74) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.59e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 176 total aligned reads displayed.
GGTGCAGCGCGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCT.GCCGAGG.GCAG.TGGAA.CC.GCGATGG.AA.GGCT.GCC.GA.G.TGTTCGCCCGGCA..GGGCGC.GGCA.C.GGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGATGCCGGGCGCCGCGA > NC_014034/3256093‑3256277
|
ggTGCAGCGCGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATgg > 2:3674309/1‑101 (MQ=255)
ggTGCAGCGCGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATgg > 2:1381533/1‑101 (MQ=255)
gTGCAGCGCGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggc < 2:1811526/101‑2 (MQ=255)
gTGCAGCGCGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggc < 2:3691924/101‑2 (MQ=255)
gCAGCGCGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcac > 1:1456001/1‑98 (MQ=255)
gCAGCGCGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcac < 1:1793719/101‑4 (MQ=255)
cAGCGCGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacg > 1:2305727/1‑97 (MQ=255)
gcgcGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggc < 2:3341112/101‑7 (MQ=255)
gcgcGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggc > 1:1909274/1‑95 (MQ=255)
gcgcGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggc < 2:4303951/101‑7 (MQ=255)
cgcgTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggct < 1:444872/101‑8 (MQ=255)
cgcgTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggct > 2:1579596/1‑94 (MQ=255)
gcgTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggctg < 2:2509045/101‑9 (MQ=255)
gcgTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggctg < 1:2880848/101‑9 (MQ=255)
gcgTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGAACCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggctg > 2:2171284/1‑93 (MQ=255)
cgTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCGTGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggctgg < 1:2700696/101‑10 (MQ=255)
cgTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggctgg > 1:1754873/1‑92 (MQ=255)
cgTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggctgg < 1:376228/101‑10 (MQ=255)
gTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggctggc > 1:3179744/1‑91 (MQ=255)
gTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggctggc > 2:3558680/1‑91 (MQ=255)
gTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATggcacggctggc > 2:2176497/1‑91 (MQ=255)
ccGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.g.ttg > 2:792740/1‑99 (MQ=255)
ccGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.g.ttg > 2:1977178/1‑99 (MQ=255)
gAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.g.ttgct > 2:838573/1‑97 (MQ=255)
gAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGCCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.g.ttgct > 1:4513077/1‑97 (MQ=255)
aGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGG.CACGGCTGGCC.GA.g.ttgctc < 2:687556/101‑6 (MQ=255)
ggggCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.g.ttgctcg < 2:4535661/101‑7 (MQ=255)
gggCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.g.ttgctcgc > 1:990426/1‑94 (MQ=255)
gCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGG.CACGGCTGGCC.GA.GTTGCTCGccc < 1:61463/101‑1 (MQ=255)
cTTTTGCTCAAGGGCGGCGGGCACCGCGTGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCg < 2:3305212/101‑1 (MQ=255)
cTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCg < 2:1606311/101‑1 (MQ=255)
cTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGG.CACGGCTGGCC.GA.GTTGCTCGCCCg < 2:2618084/101‑1 (MQ=255)
ttttGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCgg > 1:829929/1‑101 (MQ=255)
ttttGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCgg > 2:871537/1‑101 (MQ=255)
tGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..g < 2:4384814/101‑1 (MQ=255)
cTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..ggg > 2:2062915/1‑101 (MQ=255)
cTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGG.CACGGCTGGCC.GA.GTTGCTCGCCCGGCA..ggg < 2:1286207/101‑1 (MQ=255)
cAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCCGCA..GGgcg > 1:3013521/1‑101 (MQ=255)
caGGGCGGCGGGCACCGCATGGCCGCGGGCCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GATGCGCGCCCCGCA..GGgcgg > 2:1467636/2‑100 (MQ=255)
aaGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..gggggg > 1:689307/1‑98 (MQ=255)
aaGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGgcgg > 2:2787796/1‑100 (MQ=255)
gggCGGCGGGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCCGGG.G.TGCTCGCCCGGCA..GGGCGC.gg > 2:4084916/1‑101 (MQ=255)
ggacggcggGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGGGC.gg > 1:2463054/4‑101 (MQ=255)
cggcggGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..ggggggcggga > 1:3241911/1‑93 (MQ=255)
cggcggGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGC.gggca < 2:2628452/101‑4 (MQ=255)
cggcggGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCCGCC..GGGGGC.ggggc > 2:4067713/1‑98 (MQ=255)
ggcggGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGC.gggcga > 2:519006/1‑97 (MQ=255)
gcggGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGC.gggcacg < 2:3549911/101‑6 (MQ=255)
cggGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCC..GGGCGC.ggggaagg > 2:3095308/1‑95 (MQ=255)
cggGCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.c.gg < 2:4156024/101‑1 (MQ=255)
gggCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.c.ggg > 2:2018647/1‑100 (MQ=255)
gggCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.c.ggg < 1:3795079/101‑2 (MQ=255)
ggCACCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGAC.GAGG.TGCTCGCCCGGGA..GGGCGC.gggggacggc > 2:3057970/1‑93 (MQ=255)
aCCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.c.gggcggc > 1:286604/1‑96 (MQ=255)
aCCGCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.c.gggcggc < 2:2724240/101‑6 (MQ=255)
gCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCNCGGGCA.c.gggcgggccg > 2:1548092/1‑93 (MQ=255)
gCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGcggcccg < 2:432383/101‑1 (MQ=255)
gCATGGCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGcggcccg > 1:4273433/1‑101 (MQ=255)
ggCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.c.gggggggcccgccg > 2:3448740/1‑92 (MQ=255)
gCCGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGa < 1:1545486/101‑1 (MQ=255)
ccGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCAGGGGGCGG.GGCC.G.GGCGGCCCGGCCGAt > 2:3621401/1‑101 (MQ=255)
ccGCGGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGGCCGGCCggt > 2:144133/1‑99 (MQ=255)
cgcgGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCGGATc < 2:1266917/101‑1 (MQ=255)
gcgGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATcc > 2:1163564/1‑100 (MQ=255)
gcgGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCt < 2:2093294/101‑1 (MQ=255)
gcgGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCt < 1:1977313/101‑1 (MQ=255)
gcgGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCt < 1:728597/101‑1 (MQ=255)
gcgGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCt < 1:3626761/101‑1 (MQ=255)
cgGGTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGGACC.GGCGGCCCCGCCGGTCTg > 2:3822876/1‑101 (MQ=255)
ggTCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCg > 1:2203754/1‑101 (MQ=255)
tCTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGGGGCCCGGCCGGGCTGCggg > 1:62098/1‑100 (MQ=255)
cTGACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCt < 1:822589/101‑1 (MQ=255)
gACCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTgg < 1:178329/101‑1 (MQ=255)
aCCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCNGCCGCTCTGCGGCTGGa > 2:2235693/1‑101 (MQ=255)
aCCCTGGCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGGTCTGCGGCCggg > 1:3416844/1‑100 (MQ=255)
cctggCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACg < 1:923382/97‑1 (MQ=255)
ctggCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCC.CGGGGGGGCCGGCCGATCTTCGGCCGGGCgg > 2:288264/4‑101 (MQ=255)
ctggCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACgg < 2:3179501/98‑1 (MQ=255)
ctggCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCACGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCCGGGCgg > 1:3947938/4‑101 (MQ=255)
ggCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCCGCCGATCTGCGGCTGGACgggg > 2:1531256/2‑100 (MQ=255)
gCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCt < 1:1481791/101‑1 (MQ=255)
gCCGAGGCGCAGCTGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCt < 1:2082738/101‑1 (MQ=255)
gaggcgcagctGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCt < 1:257630/91‑1 (MQ=255)
aggcgcagctGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTg < 1:1767024/92‑1 (MQ=255)
gcgcggctGGAA.CCGGCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGAt < 2:1046333/94‑1 (MQ=255)
gcgcagctGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGAt < 1:2149225/94‑1 (MQ=255)
cagctGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGTCCGATCTGCGGCTGGACGGGCTCCTGATGcc < 1:4141513/97‑1 (MQ=255)
ctGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGATGCCggg < 1:1070463/100‑1 (MQ=255)
tGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGGCGGGCTCCTGGTGCCcggg > 1:4235307/1‑100 (MQ=255)
tGGAACCC.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGATGCCGGgc < 1:2787994/101‑1 (MQ=255)
ggaaccc.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGATGCCGGgcg > 2:2153118/6‑101 (MQ=255)
gaaccc.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGGCGGGGGCCTGGTGCCGGgcgc > 1:3497802/5‑101 (MQ=255)
gaaccc.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGGCGGGCTCCTGATGCCGGgcgc > 2:4408396/5‑101 (MQ=255)
aaccc.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCTCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGATGCCGGGcgcc < 1:4003155/98‑1 (MQ=255)
aaccc.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGATGCCGGGcgcc < 1:1130446/98‑1 (MQ=255)
aaccc.GCGATGG.CACGGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGATGCCGGGcgcc > 1:3127101/4‑101 (MQ=255)
accc.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGATGCCGGGcgccg < 1:3078260/99‑1 (MQ=255)
accc.GCGATGG.CACGGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGGGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGGCGGGGCCCCGGTGCCCGGcgccc > 1:3195257/3‑100 (MQ=255)
ccc.GCGATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGATGCCGGGcgccgc < 1:1355033/100‑1 (MQ=255)
c.gcgATGGCAC.GGCTGGCC.GA.GTTGCTCGCCCGGCA..GGGCGCGGGCA.CGGGCGGCCCGGCCGATCTGCGGCTGGGCGGGGTCCCGGTGCCGGGggccgggg > 1:3322884/1‑98 (MQ=255)
|
GGTGCAGCGCGTCGCGGCCGAGGGGCTTTTGCTCAAGGGCGGCGGGCACCGCATGGCCGCGGGTCTGACCCT.GCCGAGG.GCAG.TGGAA.CC.GCGATGG.AA.GGCT.GCC.GA.G.TGTTCGCCCGGCA..GGGCGC.GGCA.C.GGCGGCCCGGCCGATCTGCGGCTGGACGGGCTCCTGATGCCGGGCGCCGCGA > NC_014034/3256093‑3256277
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|