| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,609,080 | +C | 98.0% | intergenic (+19/‑152) | clpB → / → dinB | chaperone ClpB/DNA polymerase IV |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,609,080 | 1 | .→C | 98.0% | 4.5 ‑1.2 ‑0.0 | 202 | intergenic (+19/‑152) | clpB/dinB | chaperone ClpB/DNA polymerase IV |
| Reads supporting (aligned to +/- strand): new base (76/122): ref base (3/1): total (79/123) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.02e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.78e-01 | ||||||||||
Only 100 of 220 total aligned reads displayed.
GCCGGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGT.GGG.GGCTCT.G.CC.CCC..GCTTCGCTCCCCCCGGGATATTT.G.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAA > NC_014034/3608981‑3609176
|
gccgGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.g > 1:2659091/1‑101 (MQ=255)
cccGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.G.cc.cccc < 1:4410060/101‑2 (MQ=255)
ccGACGGGCTGGTGGTCGGCGGCAAGGTCTCGCCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.G.cc.ccccg < 1:1781415/101‑3 (MQ=255)
cGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.G.cc.ccccgc < 2:837553/101‑4 (MQ=255)
gACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.G.cc.ccccgct < 1:4583727/101‑5 (MQ=255)
aCGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.G.cc.ccccgctt > 2:216057/1‑96 (MQ=255)
cGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTc < 1:1007139/101‑1 (MQ=255)
gCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCt < 2:1732452/101‑1 (MQ=255)
cTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTc < 1:4476786/101‑1 (MQ=255)
cTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCNTCGCTc > 1:1832935/1‑101 (MQ=255)
cTGGTGGTCGGCGGCAAGGTCTCGCCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTc < 2:4316253/101‑1 (MQ=255)
tggtggTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTcc < 1:799465/101‑1 (MQ=255)
gtggtCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTcccc > 2:3940711/1‑101 (MQ=255)
ggtCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTcccccc < 2:2220079/101‑1 (MQ=255)
ggtCGGCGCCAAGGCCTCGGCCAGCCAGCGCGTTCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTcccccc < 1:4025101/101‑1 (MQ=255)
gtCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCg > 1:68618/1‑101 (MQ=255)
gtCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCg > 2:1647254/1‑101 (MQ=255)
ggggcggcAAGGTCTGGGGCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATGCGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCgg < 2:372267/99‑1 (MQ=255)
cggcggCAAGGTCTCGGCCAGCCAGCGCGTCCAGCCCGAACCGCGCGTGCTGAACTGATACGGGAGT.GGGNNNNNNT.G.CCNCNC..CCNTCGCTCCCCCCggg > 1:3614007/1‑101 (MQ=255)
cggcggCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCggg < 1:3463148/101‑1 (MQ=255)
ggcggcAGGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGa < 2:2377244/101‑1 (MQ=255)
ggcggcAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGa < 1:1903825/101‑1 (MQ=255)
cggcAGGTTCCCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGata < 2:1996225/101‑1 (MQ=255)
gcAAGGTCTCGCCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATAtt < 1:4220030/101‑1 (MQ=38)
aaGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTT.g > 2:58720/1‑101 (MQ=39)
ggTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTT.g.gg > 2:1240711/1‑101 (MQ=39)
tctcGTCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTT.g.gggc < 1:2872786/101‑3 (MQ=38)
tctcGGCCAGCCAGCGCGTCCATACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTT.g.gggc < 2:538337/101‑3 (MQ=38)
tctcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTT.g.gggc > 2:2523327/1‑99 (MQ=38)
ctcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTT.g.gggca > 2:297648/1‑98 (MQ=38)
ctcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTT.g.gggca > 2:383148/1‑98 (MQ=38)
ctcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCCGGATATTT.g.gggca > 1:1750346/1‑98 (MQ=255)
tcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTT.g.gggcaa > 2:2162669/1‑97 (MQ=38)
ggCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAgg < 2:4477113/101‑1 (MQ=38)
gccagccaGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGt > 1:293478/1‑101 (MQ=38)
ccagccagCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTa < 1:818751/101‑1 (MQ=38)
ccagccagCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTa > 2:3098128/1‑101 (MQ=38)
agccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaa < 2:1897923/101‑1 (MQ=38)
gccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaaa < 2:3350307/101‑1 (MQ=38)
ccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAg < 2:2291976/101‑1 (MQ=38)
ccagcGCGTCCAGACCGAACCGCGCGCGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGACATTTGG.GGCAAGGTAAAAg > 1:2476690/1‑101 (MQ=37)
cagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGc < 2:1135134/101‑1 (MQ=38)
cagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGc > 2:970461/1‑101 (MQ=37)
cagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGc > 1:1178691/1‑101 (MQ=37)
gcgcGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAt < 2:4157545/101‑1 (MQ=38)
ggcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAtt < 1:3427233/100‑1 (MQ=37)
cgcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAtt < 1:922991/101‑1 (MQ=38)
cgTCCGGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGc < 1:2180538/101‑1 (MQ=37)
gTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGcc < 2:725227/101‑1 (MQ=38)
gTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGcc > 2:3406401/1‑101 (MQ=37)
ccAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCt < 2:3358788/101‑1 (MQ=38)
ccAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCt < 1:2322047/101‑1 (MQ=38)
cAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCtt < 2:2871115/101‑1 (MQ=38)
cAGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCtt < 1:4541748/101‑1 (MQ=38)
aGACCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCttt > 1:3782884/1‑101 (MQ=37)
aCCGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTAt < 1:1460277/101‑1 (MQ=38)
ccGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATc < 1:3872431/101‑1 (MQ=38)
ccGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATc < 2:1194396/101‑1 (MQ=38)
cGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCt > 1:489218/1‑101 (MQ=37)
cGAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCt < 1:1986370/101‑1 (MQ=38)
gAACCGCGCGTTCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt < 1:3659215/101‑1 (MQ=37)
gAACCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt > 1:1238085/1‑101 (MQ=37)
gAACCGCGCGTGCTGAACTGATACAGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt < 2:2638405/101‑1 (MQ=37)
aaCCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTg < 1:3084701/101‑1 (MQ=38)
aaCCGCGCGTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTg > 1:2829437/1‑101 (MQ=37)
cgcgcgTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCt < 2:1380301/101‑1 (MQ=38)
cgcgcgTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCt > 1:4143935/1‑101 (MQ=37)
cgcgTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCa < 2:684306/101‑1 (MQ=38)
gcgTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCat < 1:2984505/101‑2 (MQ=38)
cgTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGa > 2:1422770/1‑101 (MQ=37)
cgTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGa > 2:2403080/1‑101 (MQ=37)
gTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGat < 2:4240665/101‑1 (MQ=38)
gTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGat < 2:268744/101‑1 (MQ=38)
gTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGat < 2:4661249/101‑1 (MQ=38)
gTGCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGat < 2:3626616/101‑1 (MQ=38)
gCTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGatat > 2:1572396/1‑101 (MQ=37)
cTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATc < 2:3553045/101‑1 (MQ=38)
cTGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATc < 2:3281427/101‑1 (MQ=38)
tGAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATcc > 2:4366117/1‑101 (MQ=37)
gAACTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATccc < 2:2818562/101‑1 (MQ=37)
cTGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCggg > 1:4561799/1‑101 (MQ=37)
tGATACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCgggg < 1:2630122/101‑1 (MQ=37)
aTACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGt < 1:58726/101‑1 (MQ=37)
tACGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTg > 1:3266244/1‑101 (MQ=37)
aCGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAACAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGGGa > 2:765278/1‑101 (MQ=25)
aCGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGa > 2:2593619/1‑101 (MQ=25)
cGGGAGTGGGG.GGCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAGGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGaa > 2:3153688/1‑101 (MQ=25)
ggggggggg.ggCTCTCC.CC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAtt < 1:3236462/95‑1 (MQ=25)
agtgggg.ggCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAtttt < 2:2473939/97‑1 (MQ=37)
gtgggg.ggCTCT.GCCC.CCC..GCTTCGCTCCCCCCGTGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTg < 2:495864/98‑1 (MQ=37)
gtgggg.ggCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTg > 2:4264269/4‑101 (MQ=37)
gggg.ggCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgc < 1:2052997/100‑1 (MQ=38)
gggg.ggCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgc < 1:1315293/100‑1 (MQ=37)
gg.ggCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgcgc > 1:2133330/1‑101 (MQ=37)
gg.ggCTCT.G.CC.CCCCGGCTTCGCTCCCCCCGGGATATTT.GCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTGAAttggccaa > 2:3794856/1‑95 (MQ=2)
gg.ggCTCG.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgcgc < 1:917776/101‑1 (MQ=37)
g.ggCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCa < 1:3406655/101‑1 (MQ=38)
g.ggCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCa < 2:2149278/101‑1 (MQ=38)
ggCTCT.GCCC.CCC..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAg > 1:1941671/1‑101 (MQ=37)
gCTCT.G.CC.CCCCGGCTTCGCTCCCCCCGGGATATTT.GCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTGAAttggccaaagg > 2:2840926/1‑92 (MQ=2)
|
GCCGGTCCCGACGGGCTGGTGGTCGGCGGCAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGT.GGG.GGCTCT.G.CC.CCC..GCTTCGCTCCCCCCGGGATATTT.G.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAA > NC_014034/3608981‑3609176
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|