| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,701,433 | +GGGCTTC | 100% | intergenic (+10/+39) | grpE → / ← mutS | GrpE protein/DNA mismatch repair protein MutS |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,701,433 | 1 | .→G | 100.0% | 128.9 | 47 | intergenic (+10/+39) | grpE/mutS | GrpE protein/DNA mismatch repair protein MutS |
| Reads supporting (aligned to +/- strand): new base (0/47): ref base (0/0): total (0/47) | ||||||||||
| * | NC_014034 | 3,701,433 | 2 | .→G | 100.0% | 128.8 | 47 | intergenic (+10/+39) | grpE/mutS | GrpE protein/DNA mismatch repair protein MutS |
| Reads supporting (aligned to +/- strand): new base (0/47): ref base (0/0): total (0/47) | ||||||||||
| * | NC_014034 | 3,701,433 | 3 | .→G | 100.0% | 128.4 | 47 | intergenic (+10/+39) | grpE/mutS | GrpE protein/DNA mismatch repair protein MutS |
| Reads supporting (aligned to +/- strand): new base (0/47): ref base (0/0): total (0/47) | ||||||||||
| * | NC_014034 | 3,701,433 | 4 | .→C | 100.0% | 128.3 | 47 | intergenic (+10/+39) | grpE/mutS | GrpE protein/DNA mismatch repair protein MutS |
| Reads supporting (aligned to +/- strand): new base (0/47): ref base (0/0): total (0/47) | ||||||||||
| * | NC_014034 | 3,701,433 | 5 | .→T | 100.0% | 128.5 | 47 | intergenic (+10/+39) | grpE/mutS | GrpE protein/DNA mismatch repair protein MutS |
| Reads supporting (aligned to +/- strand): new base (0/47): ref base (0/0): total (0/47) | ||||||||||
| * | NC_014034 | 3,701,433 | 6 | .→T | 100.0% | 127.8 | 47 | intergenic (+10/+39) | grpE/mutS | GrpE protein/DNA mismatch repair protein MutS |
| Reads supporting (aligned to +/- strand): new base (0/47): ref base (0/0): total (0/47) | ||||||||||
| * | NC_014034 | 3,701,433 | 7 | .→C | 100.0% | 127.9 | 47 | intergenic (+10/+39) | grpE/mutS | GrpE protein/DNA mismatch repair protein MutS |
| Reads supporting (aligned to +/- strand): new base (0/47): ref base (0/0): total (0/47) | ||||||||||
CATCATTCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGG.......GCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAGGGCGCGCAGGGCGTAA > NC_014034/3701333‑3701502
|||||||
catcatTCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGGCGGCGCGAGTTCGATGCCGAACGCCTGAGGCAGGTCgg > 2:3285380/1‑101 (MQ=255)
catcatGCAGGTGATGGACGACGGCTTCCTGCTGCACGCCCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg < 1:2227901/101‑1 (MQ=255)
atcatTCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......g < 1:329091/101‑1 (MQ=255)
atcatTCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......g < 1:1537546/101‑1 (MQ=255)
atcatGCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......g < 2:331372/101‑1 (MQ=255)
catTCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......ggg < 1:3811160/101‑3 (MQ=255)
atTCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......gggc < 1:2717053/101‑4 (MQ=255)
atTCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......gggc < 1:945932/101‑4 (MQ=255)
ttCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......gggct < 2:200465/101‑5 (MQ=255)
ttCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......gggct < 2:839863/101‑5 (MQ=255)
ttCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......gggct < 2:934800/101‑5 (MQ=255)
tCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......gggctt < 2:1521334/101‑6 (MQ=255)
cAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......gggcttc < 2:3114197/101‑7 (MQ=255)
cAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......gggcttc < 2:1764087/101‑7 (MQ=255)
aGGTGATGGACGACGGCTTCCGGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGGGGG.......Gcgggggg > 1:2643688/1‑95 (MQ=255)
gTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......gggcttcgcc < 1:1114539/101‑10 (MQ=255)
tGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCgg.......gggcttcgccc < 1:3676688/101‑11 (MQ=255)
tgcACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTc < 2:2596938/101‑1 (MQ=21)
gcACGGCCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCa < 1:3341070/101‑1 (MQ=21)
gcACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCa < 2:2129643/101‑1 (MQ=21)
gcACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCa < 1:640265/101‑1 (MQ=21)
cACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAg < 2:4474751/101‑1 (MQ=21)
aCGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGc < 2:4337260/101‑1 (MQ=21)
gACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCaa < 1:2753812/101‑1 (MQ=21)
gACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCaa < 2:1238306/101‑1 (MQ=21)
caCCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCaa < 2:2616910/100‑1 (MQ=21)
aCCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAg < 2:60239/101‑1 (MQ=21)
aCCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAg < 2:304225/101‑1 (MQ=21)
cGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGAt < 1:1599110/101‑1 (MQ=21)
tCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATaa < 2:2947987/101‑1 (MQ=21)
ctgctgCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATaaa < 1:1825796/101‑1 (MQ=21)
ctgctgCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATaaa < 1:3031620/101‑1 (MQ=21)
tgctgcGTCCGGCGGAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAg < 2:1763449/101‑1 (MQ=21)
tgctgcGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAg < 1:2417601/101‑1 (MQ=21)
tgctgcGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTACAGCAAGATAAAg < 2:1793863/101‑1 (MQ=21)
ctgcGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGAt < 1:3961404/101‑1 (MQ=21)
ctgcGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGAt < 2:1563380/101‑1 (MQ=21)
ctgcGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGAt < 2:2335892/101‑1 (MQ=21)
tgcGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATc < 1:4651350/101‑1 (MQ=21)
tgcGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATc < 1:3762784/101‑1 (MQ=21)
cGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAg < 1:2709973/101‑1 (MQ=21)
gTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGt < 1:2700883/101‑1 (MQ=21)
gTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGt < 1:336765/101‑1 (MQ=21)
gTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGt < 1:1422565/101‑1 (MQ=21)
gTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGt < 1:3189021/101‑1 (MQ=21)
gTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGt < 2:2180601/101‑1 (MQ=21)
gTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGt < 2:676575/101‑1 (MQ=21)
tCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTc < 1:1038503/101‑1 (MQ=21)
ccGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCt < 2:2469280/101‑1 (MQ=21)
cGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCtt < 2:2643503/101‑1 (MQ=21)
ggCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCttt < 2:106059/101‑1 (MQ=21)
ggCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCttt < 1:3939845/101‑1 (MQ=21)
ngANANNCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTcn < 1:1761863/100‑2 (MQ=18)
aaaGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACTCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGa < 1:1962699/101‑1 (MQ=21)
aaGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGaa < 1:644303/101‑1 (MQ=21)
aGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAg < 1:1091325/101‑1 (MQ=21)
ggCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAGGgcg < 1:252417/101‑1 (MQ=21)
cGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAGGgcgcg < 2:2501862/101‑1 (MQ=21)
tGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAGGGCGCGCa < 2:826300/101‑1 (MQ=21)
tGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAGGGCGCGCa < 2:2041836/101‑1 (MQ=21)
aGTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAGGGCGCGCAgg < 1:3588220/101‑1 (MQ=21)
gTTCGATGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAGGGCGCGCAggg < 1:1295601/101‑1 (MQ=21)
aTGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAGGGCGCGCAGGGCGTaa < 1:3086080/101‑1 (MQ=21)
aTGCCGAAAGCCTGAGGCAGGCCGGGGGCTTCGCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAGGGCGCGCAGGGCGTaa < 2:698764/101‑1 (MQ=21)
|||||||
CATCATTCAGGTGATGGACGACGGCTTCCTGCTGCACGACCGTCTGCTGCGTCCGGCGAAAGTCGGCGTGAGTTCGATGCCGAAAGCCTGAGGCAGGCCGG.......GCCCCCGGACCCCCAGGATATTTTCAGCAAGATAAAGATCAGTCTTTCAGAAGGGCGCGCAGGGCGTAA > NC_014034/3701333‑3701502
Base quality scores:
ATCG
< 3 ≤
ATCG
< 24 ≤
ATCG
< 31 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|