| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 408,497 | +GCAGA | 100% | intergenic (+115/+33) | glnA1 → / ← dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 408,497 | 1 | .→G | 100.0% | 76.8 | 147 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (93/29): ref base (10/14): total (103/44) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.29e-03 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
| * | NC_014034 | 408,497 | 2 | .→C | 100.0% | 80.0 | 147 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (93/29): ref base (10/15): total (103/44) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.40e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.11e-01 | ||||||||||
| * | NC_014034 | 408,497 | 3 | .→A | 100.0% | 77.9 | 147 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (93/29): ref base (10/15): total (103/44) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.40e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
| * | NC_014034 | 408,497 | 4 | .→G | 100.0% | 80.2 | 147 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (93/29): ref base (10/15): total (103/44) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.40e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.12e-01 | ||||||||||
| * | NC_014034 | 408,497 | 5 | .→A | 100.0% | 77.9 | 147 | intergenic (+115/+33) | glnA1/dapA | glutamine synthetase/dihydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): new base (93/29): ref base (10/15): total (103/44) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.40e-04 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.61e-01 | ||||||||||
Only 100 of 156 total aligned reads displayed.
TGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGG....G.....GC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGC > NC_014034/408397‑408571
|||||
tGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACgggg....g.....g > 1:3521186/1‑101 (MQ=255)
tGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACgggg....g.....g < 2:3073394/101‑1 (MQ=255)
gCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gc > 2:1794406/1‑101 (MQ=255)
ccccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcag < 1:1155364/101‑3 (MQ=255)
ccccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcag > 2:746743/1‑99 (MQ=255)
cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcaga < 1:2715690/101‑4 (MQ=255)
cccAGAACCCCGGGATATTTGCGGCAGGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcaga < 2:3677516/101‑4 (MQ=25)
ccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcagag > 2:782892/1‑97 (MQ=255)
ccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcagag > 2:4497690/1‑97 (MQ=255)
agcccccgGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcagagcc < 2:4039632/98‑7 (MQ=25)
agccccccGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcagagcc < 2:1697371/98‑7 (MQ=25)
aCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcagaggccc > 1:2820786/1‑93 (MQ=25)
aCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcagagcccc > 2:487519/1‑93 (MQ=25)
cccccGGGATATTTGCGGCAAGATGAAGCCGATGTTCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcagagccccc > 1:4172146/1‑92 (MQ=25)
ccccGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....Gcagagcccccc < 1:2206378/101‑11 (MQ=25)
tGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGcc > 1:4465671/1‑101 (MQ=21)
tGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGcc < 1:1908193/101‑1 (MQ=21)
gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCa > 1:3848788/1‑101 (MQ=21)
gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCa > 2:2159111/1‑101 (MQ=21)
cGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCaa > 1:4227168/1‑101 (MQ=21)
cGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCaa > 1:2749363/1‑101 (MQ=21)
gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCaaaa < 2:4497507/101‑1 (MQ=21)
aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAgg < 2:1790302/101‑1 (MQ=21)
aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAgg < 1:4496811/101‑1 (MQ=21)
tgtaGCCGATGTGCTTCTTCTTACGGCAAATATCCGGGGGGGAGGCTTGCTGATAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGgaccg < 2:772020/98‑1 (MQ=255)
gAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGgaccga > 2:3036764/1‑101 (MQ=21)
aaGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGgaccgac > 1:4235756/1‑101 (MQ=21)
aaGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGgaccgac < 2:258401/101‑1 (MQ=21)
aaGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGCCGCCAAACGgaccgac > 2:1888544/1‑101 (MQ=18)
gCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCt > 1:241500/1‑101 (MQ=21)
gCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....GCAGAGACCC.CCGCACAGGTCGCCAAAAGgaccgacat > 1:1521024/1‑99 (MQ=21)
cGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCa > 1:100880/1‑101 (MQ=21)
gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAg > 1:3223216/1‑101 (MQ=21)
gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAg > 2:1385529/1‑101 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGa > 2:2700486/1‑101 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGa > 2:1563419/1‑101 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGa < 2:1406402/101‑1 (MQ=21)
aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGa > 2:1393356/1‑101 (MQ=21)
tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGAt > 2:3424927/1‑101 (MQ=21)
gTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATc < 1:782967/101‑1 (MQ=21)
tCCTTCATCTTGCCGCAAATTTCCCGGGGGGAGTTTTGCTGCAAGC.AAGACGGGGTGCAGA....GC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACTTCTGATCa < 1:3407254/101‑1 (MQ=12)
tCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCa < 1:4497985/101‑1 (MQ=21)
ccTTCATCTTGCCGCAGATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAg > 1:4075084/1‑101 (MQ=25)
ccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAg > 2:479483/1‑101 (MQ=21)
cTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc > 1:4389455/1‑101 (MQ=21)
cTTCAGCGTGCCGCAAATGTCCCGGGGGGAGGCTTGCTTAGAGC.AAGACGGGG....GGCCGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc < 1:1531972/101‑1 (MQ=255)
ttCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGcc > 2:1651569/1‑101 (MQ=21)
tCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCCAAGGTCGCCAAAAGGACCGACCTCAGATCAGccc > 1:4010994/1‑101 (MQ=18)
tCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc > 1:766393/1‑101 (MQ=21)
tCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc > 1:3182280/1‑101 (MQ=21)
cATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg > 1:4480274/1‑101 (MQ=21)
aTCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCgg > 1:1240321/1‑101 (MQ=21)
aTCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCgg > 1:2837731/1‑101 (MQ=21)
tCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGc > 2:4056323/1‑101 (MQ=21)
tCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGc > 2:4368198/1‑101 (MQ=21)
cTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg > 2:1147166/1‑101 (MQ=25)
cTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg > 2:2230083/1‑101 (MQ=25)
cTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg < 1:1386509/101‑1 (MQ=25)
ttGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgt < 1:2609014/101‑1 (MQ=25)
tGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....G.....GCAGAG.CCCGCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtg > 1:3921440/1‑101 (MQ=25)
gCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtgt < 1:1794525/101‑1 (MQ=25)
cGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTg > 2:1826721/1‑101 (MQ=25)
cAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa > 2:4633618/1‑101 (MQ=25)
cAAATATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa < 2:125412/101‑1 (MQ=255)
aaaTATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt > 1:2365403/1‑101 (MQ=37)
aaaTATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt > 1:2987627/1‑101 (MQ=37)
aaaTATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt > 2:3814545/1‑101 (MQ=37)
aaTATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc > 2:1368927/1‑101 (MQ=255)
aaTATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc > 1:1313730/1‑101 (MQ=255)
aaTAGCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc < 2:2528424/101‑1 (MQ=255)
atatCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcg > 2:3408732/1‑101 (MQ=255)
tatCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCNNCNNCAGATCAGCCCGGCGTGTTGCATcgc > 1:3045995/1‑101 (MQ=255)
tatCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCNACCTCAGATCAGCCCGGCGTGTTGCATcgc > 1:661998/1‑101 (MQ=255)
tatCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgc > 2:3566215/1‑101 (MQ=255)
tCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcgg > 1:2634950/1‑101 (MQ=255)
cccGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggc > 1:3322444/1‑101 (MQ=255)
cccGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggc < 2:3520928/101‑1 (MQ=255)
cccGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggc > 1:4309795/1‑101 (MQ=255)
cccGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggc < 2:3049990/101‑1 (MQ=255)
cGGGGGGAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGt > 2:4086725/1‑101 (MQ=255)
ggggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc > 2:1134767/1‑101 (MQ=255)
ggggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc > 2:544094/1‑101 (MQ=255)
ggggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc > 2:1253382/1‑101 (MQ=255)
ggggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc > 2:2397515/1‑101 (MQ=255)
ggggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc > 2:4220298/1‑101 (MQ=255)
ggggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc > 2:3254146/1‑101 (MQ=255)
ggggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc > 2:3346193/1‑101 (MQ=255)
gggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa > 2:1001673/1‑101 (MQ=255)
ggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCACAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCaa > 2:563154/1‑101 (MQ=255)
ggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCaa > 2:2269536/1‑101 (MQ=255)
ggggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCaa > 1:220476/1‑101 (MQ=255)
ggAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCCTCGCGGCGTCAAgc > 1:1019174/1‑101 (MQ=255)
gAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg > 1:2392474/1‑101 (MQ=255)
gAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg > 2:4294398/1‑101 (MQ=255)
gAGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg < 2:1930439/101‑1 (MQ=255)
aGGCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcgc < 1:206225/101‑1 (MQ=255)
ggCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGcgcg < 2:4337392/101‑1 (MQ=255)
gCTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATAGCGGCGTCAAgagagg > 2:264864/1‑96 (MQ=255)
cTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGc > 1:51870/1‑101 (MQ=255)
cTTGCTGAAAGC.AAGACGGGG....GGCAGAGC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGc > 1:609187/1‑101 (MQ=255)
|||||
TGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGG....G.....GC.....CCC.CCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGC > NC_014034/408397‑408571
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|