| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 963,936 | +CCCC | 100% | intergenic (+23/‑78) | RCAP_rcc00874 → / → atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 963,936 | 1 | .→C | 100.0% | 63.0 | 17 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (1/16): ref base (0/0): total (1/16) | ||||||||||
| * | NC_014034 | 963,936 | 2 | .→C | 100.0% | 52.1 | 17 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (0/15): ref base (0/0): total (1/16) | ||||||||||
| * | NC_014034 | 963,936 | 3 | .→C | 100.0% | 63.4 | 17 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (1/16): ref base (0/0): total (1/16) | ||||||||||
| * | NC_014034 | 963,936 | 4 | .→C | 100.0% | 62.6 | 17 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (1/16): ref base (0/0): total (1/16) | ||||||||||
GCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCG....CCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGA > NC_014034/963836‑964014
||||
gCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGGGGGGGGAGGGCGGGGGGCTgccg > 2:4398806/1‑101 (MQ=255)
gCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg < 1:4399098/101‑1 (MQ=255)
cATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....c < 2:3858347/101‑1 (MQ=255)
tatCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccc < 2:2011259/101‑2 (MQ=255)
tCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccc < 2:522740/101‑4 (MQ=255)
tCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccc < 1:3784475/101‑4 (MQ=255)
cGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....cccccc < 2:4644505/101‑5 (MQ=255)
cGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....cccccc < 1:3500/101‑5 (MQ=255)
cGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....cccccc < 2:1853701/101‑5 (MQ=255)
gTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccg > 2:814707/1‑96 (MQ=255)
gTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccg < 2:3251493/101‑6 (MQ=255)
gTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccg < 2:2979255/101‑6 (MQ=255)
gTGGCGGGCGGGTGCGGGCGGCGGACAATGCCGATGTGCAGGAGGCGGTGATGGCGGTCCTGAACGGCTGAGGGGTAAGGTCGGGGGGCTgccg....ccccccg < 2:146057/101‑6 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCATTGCCGAGGTGCATGGGGCGGCGATGGCGGACCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 2:2630628/101‑9 (MQ=255)
cgggcgggTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaacc < 1:814781/101‑10 (MQ=255)
gggcggcCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAggg < 1:938576/100‑1 (MQ=255)
gCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCACCCCGAACCCCCCGCCCGAAGGGGGCCTCggggc > 2:317847/1‑99 (MQ=255)
ggTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTc < 1:823143/101‑1 (MQ=255)
cATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGAc < 2:2053642/101‑1 (MQ=255)
gcggcggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTc < 2:1535549/101‑1 (MQ=255)
gcggcggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTc < 1:476107/101‑1 (MQ=255)
gcggggAGGGCGGTCCTGAACGGCTGGGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGACCCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTcccc < 1:68777/101‑1 (MQ=255)
gcaaTGGCGGTCCTGAACGGCTGGGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGATCCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAg < 2:3823774/98‑1 (MQ=255)
gtGGCGGTCCTGAACGGCTGGGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAgggg < 1:3218752/100‑1 (MQ=255)
gtGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAgggg < 1:1240346/100‑1 (MQ=255)
gtGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAgggg < 1:2725539/100‑1 (MQ=255)
tGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGa < 1:3903655/101‑1 (MQ=255)
ccTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCACCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcgtt < 1:317879/101‑1 (MQ=255)
gCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGa < 2:2361983/101‑1 (MQ=255)
gggggAAGGGCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCAt < 1:2102614/101‑1 (MQ=255)
gggAAGGGCGGGGGGCTTCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCACTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCt < 2:4221008/101‑1 (MQ=255)
ggAAGGTGGGGGGGCTGCCGCCCCCCGAACCCCTCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTg < 1:3231620/101‑1 (MQ=255)
gagggTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGa < 2:2670871/98‑1 (MQ=255)
gAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGa < 2:4022176/101‑1 (MQ=255)
gAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGa < 2:4160818/101‑1 (MQ=255)
||||
GCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCG....CCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGA > NC_014034/963836‑964014
Base quality scores:
ATCG
< 3 ≤
ATCG
< 12 ≤
ATCG
< 20 ≤
ATCG
< 31 ≤
ATCG
< 39 ≤
ATCG
|