Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	974,265	+C	100%	intergenic (+145/+114)	RCAP_rcc00884 → / ← RCAP_rcc00885	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	974,265	1	.→C	100.0%	35.2	10	intergenic (+145/+114)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (6/4):  ref base (0/0):  total (6/4)

CCGCCGTCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGTGTGCGGAA  >  NC_014034/974193‑974316                                                                          |                                                    ggtgcttCGCCGCCCGAGCCCCCCCGCGTATATGCACCAAGAAAAAGCAGACGAGCGGGGTCCGGCATGGCCGCTGCTCAGCGGCTTGTTTTCACCTTGCg                          <  2:760375/95‑1 (MQ=25)     cttCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTTACCTTGCGGCaa                      >  2:1708438/3‑101 (MQ=38)       tCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCCCCTTTCGACaaaa                    >  1:1623662/1‑100 (MQ=38)           cccccGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATcc                <  1:3155915/101‑1 (MQ=255)           cccccGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATcc                >  2:838435/1‑101 (MQ=255)            ccccGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCCGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATccc               <  1:3922021/101‑1 (MQ=255)              ccGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCgg             <  1:1486421/101‑1 (MQ=255)                 gACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCcgggg          >  2:3814296/1‑100 (MQ=255)                        cAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTTACCTTTCGACCAATATCCCgggggtccgggg   >  2:303967/1‑93 (MQ=255)                         aGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCCTGCGACCAATATTCCggggggccggggg  >  2:1871592/1‑92 (MQ=255)                                                                          |                                                    CCGCCGTCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGTGTGCGGAA  >  NC_014034/974193‑974316 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG