Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 985,671 | +G | 3.1% | intergenic (+10/‑74) | betB → / → betA | betaine‑aldehyde dehydrogenase/choline dehydrogenase |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 985,671 | 1 | .→G | 3.1% | 2.7 ‑3.3 ‑0.0 | 96 | intergenic (+10/‑74) | betB/betA | betaine‑aldehyde dehydrogenase/choline dehydrogenase |
Reads supporting (aligned to +/- strand): new base (3/0): ref base (30/63): total (33/63) | ||||||||||
Fisher's exact test strand distribution p-value = 3.82e-02 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.89e-01 |
Only 100 of 122 total aligned reads displayed.
GGGGCGGGAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGCCGGTCCCCCCCCGGACCCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTG > NC_014034/985571‑985769
|
ggggCGGGAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc < 1:4614607/101‑1 (MQ=255)
ggggCGGGAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc < 1:2373274/101‑1 (MQ=255)
gggCGGGAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.g < 1:3590109/101‑1 (MQ=255)
gggCGGGAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.g < 2:1014717/101‑1 (MQ=255)
gCGGGAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.ggg < 1:4254760/101‑2 (MQ=255)
gCGGGAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.ggg < 2:2121248/101‑2 (MQ=255)
cGGGAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.gggg > 1:2915059/1‑99 (MQ=255)
cGGGAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGAGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.gggg < 1:2232985/101‑3 (MQ=255)
gggAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.ggggg < 2:902478/101‑4 (MQ=255)
gggAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.ggggg > 1:1757201/1‑98 (MQ=255)
ggAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.gggggg < 1:1242927/101‑5 (MQ=255)
gAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.ggggggt < 1:3589751/101‑6 (MQ=255)
gAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.ggggggt < 2:18761/101‑6 (MQ=255)
gAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.ggggggt > 1:2552630/1‑96 (MQ=255)
gAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.ggggggg > 1:1987105/1‑96 (MQ=255)
gAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCCATTGAACCGCAggcc.ggggggg > 2:3743997/1‑96 (MQ=255)
aaaaTTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTc < 2:3629277/101‑1 (MQ=255)
aaaTTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcccgggggggg > 1:2372188/1‑92 (MQ=255)
aaTTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAggcc.gggggggccc > 1:3358791/1‑93 (MQ=255)
aTTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTcccc < 2:4331674/101‑1 (MQ=255)
aTTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTcccc < 2:4039394/101‑1 (MQ=255)
tCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCG.GGGGGGTgccccc > 2:1527292/1‑101 (MQ=255)
ccAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTccccccc < 1:2699838/101‑1 (MQ=255)
ccAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTccccccc < 1:4417154/101‑1 (MQ=255)
ccAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGcgccccc > 1:3449989/1‑101 (MQ=255)
cAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTcccccccc < 1:2031830/101‑1 (MQ=255)
aaGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTccccccccc > 2:3028821/1‑100 (MQ=255)
aaGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCg < 1:2143906/101‑1 (MQ=255)
aGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCgg < 1:987306/101‑1 (MQ=255)
aGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCgg > 2:283308/1‑101 (MQ=255)
ggCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGa < 1:460286/101‑1 (MQ=255)
gCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAc < 2:2886657/101‑1 (MQ=255)
gATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAcccccc < 2:1619538/101‑1 (MQ=255)
gATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAcccccc < 1:4381320/101‑1 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccccg < 2:3580353/101‑2 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGGCccccccg > 2:511316/1‑100 (MQ=255)
tCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccccgg < 2:813315/101‑3 (MQ=255)
caaGCACTATACGCAGGTGAAGGCCGCCTACGTCGGCATGGGCCCGGTCGAGTGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.CCCCCCCGGc < 2:288696/99‑1 (MQ=255)
cGAGCAGTATACGCAGGTGAAGGCCGTCTAGGCCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccccggc < 2:2582465/101‑4 (MQ=255)
cGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccccggc < 2:3922479/101‑4 (MQ=255)
cGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCGAccccccggc > 1:669769/1‑98 (MQ=255)
gAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGAccccccggcg < 2:2326559/101‑5 (MQ=255)
aGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGG.GCCCCCCGGCGt > 1:4157615/1‑101 (MQ=255)
aGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCCGGCCCCCCgggg > 1:2303203/1‑99 (MQ=255)
cTATACGCAGGTGAAGGCCGTGTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCGGCCCCCCCGCCgactt > 1:3433068/1‑97 (MQ=255)
cTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTAttt < 2:2372026/101‑1 (MQ=255)
taCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTgcg < 1:1224806/101‑1 (MQ=255)
cGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGcc < 1:651505/101‑1 (MQ=255)
gCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCa < 2:3449735/101‑1 (MQ=255)
cAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCGCCCCCCGGA.CCCCCCGGCGTATTTGCGCCaa > 2:603143/1‑101 (MQ=38)
aGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAg < 1:1624914/101‑1 (MQ=255)
ggTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGa < 1:1258204/101‑1 (MQ=255)
ggTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGa < 2:734370/101‑1 (MQ=255)
tGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaaa < 2:2626279/101‑1 (MQ=255)
aaGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaaaaa < 2:1520331/101‑1 (MQ=255)
aGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaaaaaa < 2:1165628/101‑1 (MQ=255)
ggCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.CCCCCCCGGGGTATTTGCGCCCCGAAAAAAc > 2:1342317/1‑101 (MQ=255)
gTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.Aggg > 1:600479/1‑101 (MQ=255)
gTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCCGACCCCCCC.GCGGATTTGCGCCCAGAAAAAAC.Aggg > 1:2194666/1‑101 (MQ=255)
cTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGtt < 2:3079937/101‑1 (MQ=255)
tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTc < 1:2249841/101‑1 (MQ=255)
tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTc < 1:238193/101‑1 (MQ=255)
aTGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCa < 2:3103621/101‑1 (MQ=255)
tGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAg < 2:4060997/101‑1 (MQ=255)
tGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAg < 1:3715996/101‑1 (MQ=255)
tGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGGCCCCCCCCG.CCCCCCCCCCGGATTTTCCCCCAGAAAAAAA.AAGGGTCAg > 1:407133/1‑101 (MQ=255)
tGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCGGCCCCCCC.GCGGATTTTTGCCCAAAAAAAACAAGGGTTcg > 2:3724915/1‑100 (MQ=255)
gTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGGCCCCCCCCCCCCCCCCCCCCGGGTTTTGCCCCAAAAAAAAAA.Aggggcgg > 2:920036/1‑97 (MQ=255)
gTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGGACCCCCCC.GCGGATTTTCGCCAAGAAAAAAA.Agggggccgg > 1:3349066/1‑95 (MQ=255)
cGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCa < 1:1988949/101‑1 (MQ=255)
ggCATTGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCag < 2:1366010/101‑1 (MQ=37)
aTGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAgg < 2:1757082/101‑1 (MQ=255)
aTGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCGGCCCCCCC.GCGGATTTGGGCCCAAAAAAAAA.AGGGGTCAGGCGGAgg > 1:3664188/1‑101 (MQ=255)
tGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGGGTATTTGGGCCAAGAAAAAAA.AGGGGTCCGGCAGAggg > 2:2810594/1‑101 (MQ=25)
ggggCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGGCCCCCCCCGGCCCCCCCCGG.G.ATTTTCGCCCAGAAAAAAA.AAGGGTCAGGGCGAgggg > 1:1096846/1‑100 (MQ=255)
ggCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTcg < 1:1342412/101‑1 (MQ=255)
gCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCCAGAAAAAAC.AGGGTTCAGGCAGAGGGGcgc > 1:2783558/1‑101 (MQ=37)
gCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCCGA.CCCCCCGGCGTATTTGCGCCCAGAAAAAAC.AGGGTTCAGGCAGAGGGGcgc > 2:3038723/1‑101 (MQ=37)
ccGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTcgcg < 1:4051929/101‑1 (MQ=255)
cGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTcgcgc < 2:2476182/101‑1 (MQ=255)
ggTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTcgcgcg < 2:3358542/101‑1 (MQ=255)
gTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGGcggggga > 2:597675/1‑96 (MQ=38)
tCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCgat < 2:211928/101‑1 (MQ=255)
cGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCgatg < 1:1090858/101‑1 (MQ=255)
gagaGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCgatgg < 2:4495059/101‑1 (MQ=255)
gagaGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCgatgg > 2:2952846/1‑101 (MQ=39)
agagCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCgatggg > 2:1544431/1‑100 (MQ=37)
gagCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCCGA.CCCCCCGGCGAATTTTGGCCAAGAAAAAAC.AGGGGTTAGGCCGGGGGGcgggcggggggt > 2:4562779/1‑95 (MQ=255)
agCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGGACCCCCCGGCCGT.TTTGCCCCCAAAAAAAAC.AGGGTTCAAGGACAGGGTCCCGGgagggatg > 1:2088681/1‑101 (MQ=255)
gCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGc < 1:4562506/101‑1 (MQ=255)
cTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGAt < 1:283340/101‑1 (MQ=255)
tATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGAtt < 1:1577123/101‑1 (MQ=255)
gAAACGCGGGCC.GG.GGGGCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAtgtg < 2:3427923/101‑1 (MQ=37)
aaCGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGa < 1:76440/101‑1 (MQ=255)
aCGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGAt < 1:2736031/101‑1 (MQ=255)
cGCAGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATc < 1:1605852/101‑1 (MQ=255)
aGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGtt < 2:3713897/101‑1 (MQ=255)
aGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGtt < 2:3669124/101‑1 (MQ=255)
aGGCC.GGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGGCGCGCGATGGATGCGGATTATGGGAGCGtt > 1:626465/1‑101 (MQ=25)
ggcc.ggggGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTg > 1:3836414/1‑101 (MQ=255)
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GGGGCGGGAAAATTCCAAGGCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGCCGGTCCCCCCCCGGACCCCCCCGGCGTATTTGCGCCAAGAAAAAAC.AGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTG > NC_014034/985571‑985769
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|