| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,303,892 | G→C | 3.8% | intergenic (+79/+78) | urtE → / ← RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,303,892 | 0 | G→C | 3.8% | 2.8 ‑3.2 ‑0.1 | 106 | intergenic (+79/+78) | urtE/RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Reads supporting (aligned to +/- strand): new base (4/0): ref base (45/57): total (49/57) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.27e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.47e-01 | ||||||||||
Only 100 of 120 total aligned reads displayed.
GCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCT.C..CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCC....GCCAAGATGGGG..G..G.C.CCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAG > NC_014034/1303794‑1303985
|
gcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCg > 1:3830234/1‑101 (MQ=37)
cgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGc < 1:489274/101‑1 (MQ=37)
gcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCa < 2:2139799/101‑1 (MQ=37)
gcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCa < 2:3567447/101‑1 (MQ=37)
ccGTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCaa < 1:2874406/101‑1 (MQ=37)
ccGTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCaa < 2:3000834/101‑1 (MQ=37)
ccGTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCaa > 1:1585085/1‑101 (MQ=37)
cGTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCCCCCCCCGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCaaa > 1:777301/1‑101 (MQ=37)
gTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGGTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat > 2:2545248/1‑101 (MQ=37)
gTGGTCAGCGTTTAGGCAAGGGAGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat < 2:4474152/101‑1 (MQ=37)
tGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAata < 2:4252110/101‑1 (MQ=37)
tGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAata < 1:3162787/101‑1 (MQ=37)
tGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAata < 1:2986212/101‑1 (MQ=37)
gggTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCGCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAata < 2:4362535/100‑1 (MQ=25)
gggcAGGGTTTAGGGCAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAatat < 1:1531611/98‑1 (MQ=21)
ggTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAatat < 1:4116336/101‑1 (MQ=37)
ggTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAatat < 1:1129550/101‑1 (MQ=37)
gTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATc > 2:3435157/1‑101 (MQ=25)
gTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATc < 2:568293/101‑1 (MQ=37)
gTCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATc < 1:2185199/101‑1 (MQ=37)
tCAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATcc > 1:4187963/1‑101 (MQ=37)
cAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATccc < 2:3555021/101‑1 (MQ=37)
cAGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATccc < 1:664412/101‑1 (MQ=37)
aGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCg < 1:3876810/101‑1 (MQ=37)
aGCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCg > 1:3606527/1‑101 (MQ=25)
gCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgg < 2:2272683/101‑1 (MQ=37)
gCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgg < 1:186243/101‑1 (MQ=37)
gCGTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgg < 1:442255/101‑1 (MQ=37)
gTTTAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggg < 1:447572/101‑1 (MQ=37)
ctgacggacggggggCTCTGCCCC.C..CGGCTTCG.CTC.CCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCaggggg > 2:2585515/11‑101 (MQ=2)
ctgacggacggggggCTCTGCCCC.C..CGGCTTCG.CTC.CCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCaggggg > 1:3167541/11‑101 (MQ=2)
tttAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCggggg > 1:3705785/1‑101 (MQ=37)
tAGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCCAATATCCCggggggc > 2:567525/1‑100 (MQ=25)
aGGCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggggggg > 1:541675/1‑99 (MQ=25)
ggCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGAAAAAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGa < 1:4653332/101‑1 (MQ=37)
gCAAGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGaa < 1:1192725/101‑1 (MQ=37)
aaGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAtt > 2:3190409/1‑101 (MQ=25)
aaGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAtt < 2:4271463/101‑1 (MQ=37)
aaGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAtt < 1:762851/101‑1 (MQ=37)
aaGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCGATCACCTTGCCGCAAATATCCCGGGGGGTGAAtt > 1:4005449/1‑101 (MQ=25)
aaGGGGGCGCTG.CCC.CCTCGGCTTCCCCTCCCCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAtt < 1:3413847/101‑1 (MQ=25)
aGGGGGCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTg < 1:3012741/101‑1 (MQ=37)
gggggCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTgg > 1:3012954/1‑101 (MQ=37)
ggggCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgc < 2:3256091/101‑1 (MQ=37)
gggCTCTG.CCCCC..CGGCTTCG.CTC.CCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGG.GAATTGgccaaa > 1:3204317/1‑98 (MQ=2)
gggCTCTG.CCCCC..CGGCTTCG.CTC.CCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGgccaaa > 1:2983703/1‑98 (MQ=2)
gggCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgcc > 2:4053354/1‑101 (MQ=37)
ggCGCTG.CCC.CCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgcc....g < 2:3069157/101‑1 (MQ=37)
tGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGgggcggg > 2:169142/1‑101 (MQ=14)
cAAGAT.AACCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgca < 1:2988281/101‑1 (MQ=9)
aaGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcag > 1:3519800/1‑101 (MQ=14)
aaGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcag < 2:3513518/101‑1 (MQ=14)
aaGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcag > 1:3361931/1‑101 (MQ=9)
aGAT.AAACCCCATCCTTTCACCTTGCCGCAAATACCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcagg < 2:2228843/101‑1 (MQ=9)
gAT.AAACCCCATCCTTTCCCCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcaggg < 1:696988/101‑1 (MQ=9)
gAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCCG.CGCCCCCTTTTCGGGGCgggccgccagg > 2:2901542/1‑97 (MQ=9)
aT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAGGAGGGGG..GCAG.CGCCCCCTTTTAGGGGCgggccgcagggc > 1:1387025/1‑101 (MQ=9)
t.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcagggcc < 2:3334533/101‑1 (MQ=14)
t.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcagggcc > 1:2445950/1‑101 (MQ=14)
aagccctgtCCTTTCGCCTTGCCGCAAAGGTTCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcagggccg < 1:2545422/93‑1 (MQ=2)
aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcagggccg > 2:235268/1‑101 (MQ=14)
aaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcagggccgc > 1:951809/1‑101 (MQ=14)
aCCCCATCCTTTCTCCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCgggccgcagggccgca < 1:2532924/101‑1 (MQ=9)
ccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAc < 2:211985/101‑1 (MQ=14)
ccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAc > 1:625181/1‑101 (MQ=14)
ccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAAGAGGGGGTCA..G.CGCGCCCTTTTCGGGGCGGGCCGCAGGGCCGCAc > 2:2830202/1‑101 (MQ=9)
cccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAcc > 2:4394458/1‑101 (MQ=14)
ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAccc > 2:468793/1‑101 (MQ=14)
cATCCTTTCACCTTGCCGCAAATCTCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCt < 1:1934072/101‑1 (MQ=9)
cATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCt < 1:681799/101‑1 (MQ=14)
ctCCTTTCTCGTTGCGGTATATATCCTGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGT..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCCCCCTg < 2:4553359/100‑1 (MQ=2)
ccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTc > 1:244201/1‑101 (MQ=14)
ccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTc > 2:2763581/1‑101 (MQ=14)
cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCa > 2:3139949/1‑101 (MQ=14)
cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCa < 2:3417652/101‑1 (MQ=14)
tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAg < 2:3606259/101‑1 (MQ=14)
tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAg > 1:1922202/1‑101 (MQ=14)
ttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAgc > 1:3545773/1‑101 (MQ=14)
tccccTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcg < 1:2659521/98‑1 (MQ=9)
tCACCTAGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGGCGCAGGGCCGCACCCGGTCAgcg > 2:1984083/1‑101 (MQ=9)
cACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcgc > 1:4546583/1‑101 (MQ=17)
cACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcgc > 2:2595452/1‑101 (MQ=17)
aCCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGGCGCAGGGCCGGACCCTGTAAgggcc > 2:1834988/1‑100 (MQ=2)
ccTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt < 1:2833865/101‑1 (MQ=17)
ccTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt > 2:138254/1‑101 (MQ=17)
ccTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt < 2:2129937/101‑1 (MQ=17)
ccTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt < 1:1950939/101‑1 (MQ=17)
cTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGACAAGAGGGGG..GCAGAG.CCCCCTTTTCGGGGCGGGGCGCCGGGCCGCCCCCCGTCAGCGCATc > 1:1346634/1‑101 (MQ=2)
ttGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCACCCTTTTCGGGGCGGGCCACAGGGCCGCACCCTGTCAGCGCATcc > 1:3921635/1‑101 (MQ=9)
ttGCCGCAAATATCCCGGGGGGCGAATTGGCCGAAGGCCAAGAGGGGG..GGAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcc > 2:3620349/1‑101 (MQ=12)
ttGCCGAAAATAGCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcc < 1:2308745/101‑1 (MQ=9)
gCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcccc > 1:4168821/1‑101 (MQ=17)
ccGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCa > 2:2137204/1‑101 (MQ=17)
cGCAAATATCCGGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa < 1:240545/101‑1 (MQ=12)
cGCAAATATCCCGGGGGTTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa < 2:3034055/101‑1 (MQ=12)
cGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa < 2:2367764/101‑1 (MQ=17)
cGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa > 2:1536373/1‑101 (MQ=17)
cGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGCACGCAGGGCCGCACCCCGTAAGGGCATCCCCaa > 2:2675182/1‑101 (MQ=2)
gCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAg > 2:4312132/1‑101 (MQ=17)
gCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAg < 1:3847456/101‑1 (MQ=17)
|
GCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG.CCT.C..CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCC....GCCAAGATGGGG..G..G.C.CCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAG > NC_014034/1303794‑1303985
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|